RNA–Protein interactions for RNA: ENST00000439209.5

LRTOMT-208, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-208ENST00000439209 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.26
LRTOMT-208ENST00000439209 ZNF772Q68DY9 489 aaPredicted RBP16.64■□□□□ 0.25
LRTOMT-208ENST00000439209 MYOM2P54296 1465 aa16.64■□□□□ 0.25
LRTOMT-208ENST00000439209 NRXN1Q9ULB1 1477 aa16.64■□□□□ 0.25
LRTOMT-208ENST00000439209 ACIN1Q9UKV3 1341 aaKnown RBP16.64■□□□□ 0.25
LRTOMT-208ENST00000439209 RGPD8O14715 1765 aaPredicted RBP16.64■□□□□ 0.25
LRTOMT-208ENST00000439209 MARF1Q9Y4F3 1742 aaKnown RBP16.63■□□□□ 0.25
LRTOMT-208ENST00000439209 YTHDC2Q9H6S0 1430 aaKnown RBP16.62■□□□□ 0.25
LRTOMT-208ENST00000439209 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
LRTOMT-208ENST00000439209 STK26Q9P289 416 aa16.62■□□□□ 0.25
LRTOMT-208ENST00000439209 SOS2Q07890 1332 aaPredicted RBP16.62■□□□□ 0.25
LRTOMT-208ENST00000439209 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
LRTOMT-208ENST00000439209 KIF1AQ12756 1690 aa16.61■□□□□ 0.25
LRTOMT-208ENST00000439209 AFF2P51816 1311 aa16.61■□□□□ 0.25
LRTOMT-208ENST00000439209 ABCC11Q96J66 1382 aa16.61■□□□□ 0.25
LRTOMT-208ENST00000439209 WAPLQ7Z5K2 1190 aa16.6■□□□□ 0.25
LRTOMT-208ENST00000439209 PXDNQ92626 1479 aa16.6■□□□□ 0.25
LRTOMT-208ENST00000439209 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
LRTOMT-208ENST00000439209 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
LRTOMT-208ENST00000439209 ESCO1Q5FWF5 840 aa16.57■□□□□ 0.24
LRTOMT-208ENST00000439209 NPHP3Q7Z494 1330 aa16.55■□□□□ 0.24
LRTOMT-208ENST00000439209 NUTM2FA1L443 756 aa16.55■□□□□ 0.24
LRTOMT-208ENST00000439209 RXRBP28702 533 aa16.55■□□□□ 0.24
LRTOMT-208ENST00000439209 C14orf93Q9H972 538 aaKnown RBP16.55■□□□□ 0.24
LRTOMT-208ENST00000439209 ADAMTS2O95450 1211 aa16.54■□□□□ 0.24
LRTOMT-208ENST00000439209 CFAP70Q5T0N1 1121 aa16.54■□□□□ 0.24
LRTOMT-208ENST00000439209 ADGRB1O14514 1584 aa16.54■□□□□ 0.24
LRTOMT-208ENST00000439209 DLC1Q96QB1 1528 aa16.54■□□□□ 0.24
LRTOMT-208ENST00000439209 RGS12O14924 1447 aa16.53■□□□□ 0.24
LRTOMT-208ENST00000439209 USP32Q8NFA0 1604 aa16.53■□□□□ 0.24
LRTOMT-208ENST00000439209 ADGRB2O60241 1585 aa16.53■□□□□ 0.24
LRTOMT-208ENST00000439209 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.24
LRTOMT-208ENST00000439209 XPCQ01831 940 aaPredicted RBP16.52■□□□□ 0.24
LRTOMT-208ENST00000439209 ABCA3Q99758 1704 aa16.51■□□□□ 0.23
LRTOMT-208ENST00000439209 FOXO3O43524 673 aa16.51■□□□□ 0.23
LRTOMT-208ENST00000439209 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.5■□□□□ 0.23
LRTOMT-208ENST00000439209 SIRT1Q96EB6 747 aa16.5■□□□□ 0.23
LRTOMT-208ENST00000439209 NGLY1Q96IV0 654 aa16.5■□□□□ 0.23
LRTOMT-208ENST00000439209 QTRT2Q9H974 415 aaKnown RBP16.5■□□□□ 0.23
LRTOMT-208ENST00000439209 ARHGEF28Q8N1W1 1705 aaKnown RBP16.5■□□□□ 0.23
LRTOMT-208ENST00000439209 RBM6P78332 1123 aaKnown RBP16.48■□□□□ 0.23
LRTOMT-208ENST00000439209 UPF1Q92900 1129 aaKnown RBP eCLIP16.48■□□□□ 0.23
LRTOMT-208ENST00000439209 PRAM1Q96QH2 718 aa16.48■□□□□ 0.23
LRTOMT-208ENST00000439209 SAFB2Q14151 953 aaKnown RBP eCLIP16.47■□□□□ 0.23
LRTOMT-208ENST00000439209 USP21Q9UK80 565 aa16.46■□□□□ 0.23
LRTOMT-208ENST00000439209 ATRNO75882 1429 aa16.45■□□□□ 0.22
LRTOMT-208ENST00000439209 TRPM3Q9HCF6 1732 aaPredicted RBP16.45■□□□□ 0.22
LRTOMT-208ENST00000439209 HRCP23327 699 aa16.45■□□□□ 0.22
LRTOMT-208ENST00000439209 FNBP4Q8N3X1 1017 aaPredicted RBP16.45■□□□□ 0.22
LRTOMT-208ENST00000439209 PLCH1Q4KWH8 1693 aa16.45■□□□□ 0.22
LRTOMT-208ENST00000439209 TNS3Q68CZ2 1445 aa16.45■□□□□ 0.22
LRTOMT-208ENST00000439209 SPATA31A3Q5VYP0 1347 aa16.45■□□□□ 0.22
LRTOMT-208ENST00000439209 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
LRTOMT-208ENST00000439209 KDM2AQ9Y2K7 1162 aa16.44■□□□□ 0.22
LRTOMT-208ENST00000439209 ITSN1Q15811 1721 aa16.44■□□□□ 0.22
LRTOMT-208ENST00000439209 BCL9LQ86UU0 1499 aa16.43■□□□□ 0.22
LRTOMT-208ENST00000439209 KIAA1210Q9ULL0 1709 aa16.43■□□□□ 0.22
LRTOMT-208ENST00000439209 POGKQ9P215 609 aa16.43■□□□□ 0.22
LRTOMT-208ENST00000439209 TRPC5Q9UL62 973 aaPredicted RBP16.43■□□□□ 0.22
LRTOMT-208ENST00000439209 PHF8Q9UPP1 1060 aa16.43■□□□□ 0.22
LRTOMT-208ENST00000439209 ANKARQ7Z5J8 1434 aa16.43■□□□□ 0.22
LRTOMT-208ENST00000439209 ALS2Q96Q42 1657 aa16.43■□□□□ 0.22
LRTOMT-208ENST00000439209 TULP4Q9NRJ4 1543 aa16.42■□□□□ 0.22
LRTOMT-208ENST00000439209 KRT28Q7Z3Y7 464 aa16.42■□□□□ 0.22
LRTOMT-208ENST00000439209 TRAK1Q9UPV9 953 aa16.42■□□□□ 0.22
LRTOMT-208ENST00000439209 NWD2Q9ULI1 1742 aa16.42■□□□□ 0.22
LRTOMT-208ENST00000439209 SLIT2O94813 1529 aa16.4■□□□□ 0.22
LRTOMT-208ENST00000439209 CRYBG1Q9Y4K1 1723 aa16.4■□□□□ 0.22
LRTOMT-208ENST00000439209 GLI3P10071 1580 aa16.4■□□□□ 0.22
LRTOMT-208ENST00000439209 EP400Q96L91 3159 aa16.4■□□□□ 0.22
LRTOMT-208ENST00000439209 HIRIP3Q9BW71 556 aaPredicted RBP16.39■□□□□ 0.21
LRTOMT-208ENST00000439209 BRWD3Q6RI45 1802 aa16.39■□□□□ 0.21
LRTOMT-208ENST00000439209 MINK1Q8N4C8 1332 aaPredicted RBP16.39■□□□□ 0.21
LRTOMT-208ENST00000439209 SBNO1A3KN83 1393 aa16.38■□□□□ 0.21
LRTOMT-208ENST00000439209 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
LRTOMT-208ENST00000439209 TOPAZ1Q8N9V7 1692 aa16.37■□□□□ 0.21
LRTOMT-208ENST00000439209 NRAPQ86VF7 1730 aa16.37■□□□□ 0.21
LRTOMT-208ENST00000439209 PSME1Q06323 249 aa16.37■□□□□ 0.21
LRTOMT-208ENST00000439209 PMFBP1Q8TBY8 1022 aa16.37■□□□□ 0.21
LRTOMT-208ENST00000439209 EIF3AQ14152 1382 aaKnown RBP16.37■□□□□ 0.21
LRTOMT-208ENST00000439209 PRR36Q9H6K5 1346 aa16.36■□□□□ 0.21
LRTOMT-208ENST00000439209 ARHGEF10O15013 1369 aa16.36■□□□□ 0.21
LRTOMT-208ENST00000439209 ATAD2Q6PL18 1390 aa16.36■□□□□ 0.21
LRTOMT-208ENST00000439209 CABLES1Q8TDN4 633 aa16.35■□□□□ 0.21
LRTOMT-208ENST00000439209 ATP7BP35670 1465 aa16.35■□□□□ 0.21
LRTOMT-208ENST00000439209 RALGAPBQ86X10 1494 aa16.35■□□□□ 0.21
LRTOMT-208ENST00000439209 PLEKHG5O94827 1062 aa16.34■□□□□ 0.21
LRTOMT-208ENST00000439209 WASLO00401 505 aaPredicted RBP16.33■□□□□ 0.2
LRTOMT-208ENST00000439209 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.2
LRTOMT-208ENST00000439209 LMOD2Q6P5Q4 547 aa16.33■□□□□ 0.2
LRTOMT-208ENST00000439209 UNC5CLQ8IV45 518 aa16.33■□□□□ 0.2
LRTOMT-208ENST00000439209 GJD4Q96KN9 370 aaPredicted RBP16.33■□□□□ 0.2
LRTOMT-208ENST00000439209 COL14A1Q05707 1796 aaKnown RBP16.33■□□□□ 0.2
LRTOMT-208ENST00000439209 PHRF1Q9P1Y6 1649 aaKnown RBP16.32■□□□□ 0.2
LRTOMT-208ENST00000439209 QRICH2Q9H0J4 1663 aa16.3■□□□□ 0.2
LRTOMT-208ENST00000439209 GPRASP1Q5JY77 1395 aa16.3■□□□□ 0.2
LRTOMT-208ENST00000439209 TRPM1Q7Z4N2 1603 aa16.27■□□□□ 0.2
LRTOMT-208ENST00000439209 NGDNQ8NEJ9 315 aaKnown RBP16.26■□□□□ 0.19
LRTOMT-208ENST00000439209 NUDT16Q96DE0 195 aaKnown RBP16.26■□□□□ 0.19
LRTOMT-208ENST00000439209 VPS72Q15906 364 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms