RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ZMYND10O75800 440 aa7.72□□□□□ -1.17
HMGB1P18-201ENST00000438801 DGAT1O75907 488 aa7.72□□□□□ -1.17
HMGB1P18-201ENST00000438801 CD2BP2O95400 341 aaKnown RBP7.72□□□□□ -1.17
HMGB1P18-201ENST00000438801 USB1Q9BQ65 265 aaKnown RBP7.72□□□□□ -1.17
HMGB1P18-201ENST00000438801 ZC3H15Q8WU90 426 aaKnown RBP7.71□□□□□ -1.18
HMGB1P18-201ENST00000438801 REPIN1Q9BWE0 567 aaKnown RBP7.71□□□□□ -1.18
HMGB1P18-201ENST00000438801 PKD2L1Q9P0L9 805 aa7.71□□□□□ -1.18
HMGB1P18-201ENST00000438801 FAM187AA6NFU0 413 aa7.7□□□□□ -1.18
HMGB1P18-201ENST00000438801 ZBTB24O43167 697 aaPredicted RBP7.7□□□□□ -1.18
HMGB1P18-201ENST00000438801 MMP16P51512 607 aa7.7□□□□□ -1.18
HMGB1P18-201ENST00000438801 FOXC1Q12948 553 aa7.7□□□□□ -1.18
HMGB1P18-201ENST00000438801 NUTM1Q86Y26 1132 aa7.7□□□□□ -1.18
HMGB1P18-201ENST00000438801 GUCA2AQ02747 115 aa7.69□□□□□ -1.18
HMGB1P18-201ENST00000438801 SSTR3P32745 418 aaPredicted RBP7.68□□□□□ -1.18
HMGB1P18-201ENST00000438801 MYT1Q01538 1121 aa7.68□□□□□ -1.18
HMGB1P18-201ENST00000438801 ZNF787Q6DD87 383 aa7.68□□□□□ -1.18
HMGB1P18-201ENST00000438801 DXOO77932 396 aaKnown RBP7.67□□□□□ -1.18
HMGB1P18-201ENST00000438801 TTLL12Q14166 644 aaPredicted RBP7.67□□□□□ -1.18
HMGB1P18-201ENST00000438801 AMHR2Q16671 573 aa7.67□□□□□ -1.18
HMGB1P18-201ENST00000438801 SYMPKQ92797 1274 aaKnown RBP7.66□□□□□ -1.18
HMGB1P18-201ENST00000438801 TRIM32Q13049 653 aa7.65□□□□□ -1.18
HMGB1P18-201ENST00000438801 FDX1P10109 184 aa7.64□□□□□ -1.19
HMGB1P18-201ENST00000438801 GIGYF2Q6Y7W6 1299 aaKnown RBP7.64□□□□□ -1.19
HMGB1P18-201ENST00000438801 CYP4X1Q8N118 509 aa7.64□□□□□ -1.19
HMGB1P18-201ENST00000438801 CCDC24Q8N4L8 307 aa7.64□□□□□ -1.19
HMGB1P18-201ENST00000438801 SPIRE2Q8WWL2 714 aa7.64□□□□□ -1.19
HMGB1P18-201ENST00000438801 TOR4AQ9NXH8 423 aa7.64□□□□□ -1.19
HMGB1P18-201ENST00000438801 JUNDP17535 347 aa7.63□□□□□ -1.19
HMGB1P18-201ENST00000438801 RETREG3Q86VR2 466 aa7.63□□□□□ -1.19
HMGB1P18-201ENST00000438801 PCDHGC3Q9UN70 934 aa7.63□□□□□ -1.19
HMGB1P18-201ENST00000438801 WNT7AO00755 349 aa7.62□□□□□ -1.19
HMGB1P18-201ENST00000438801 C6orf229H3BNL8 230 aa7.61□□□□□ -1.19
HMGB1P18-201ENST00000438801 ST8SIA5O15466 376 aa7.61□□□□□ -1.19
HMGB1P18-201ENST00000438801 NDUFV2P19404 249 aa7.61□□□□□ -1.19
HMGB1P18-201ENST00000438801 AAASQ9NRG9 546 aa7.61□□□□□ -1.19
HMGB1P18-201ENST00000438801 TTC24A2A3L6 582 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P18-201ENST00000438801 MOXD2PA6NHM9 499 aa7.6□□□□□ -1.19
HMGB1P18-201ENST00000438801 TRIM66O15016 1216 aa7.6□□□□□ -1.19
HMGB1P18-201ENST00000438801 NUDT12Q9BQG2 462 aa7.6□□□□□ -1.19
HMGB1P18-201ENST00000438801 BEGAINQ9BUH8 593 aa7.6□□□□□ -1.19
HMGB1P18-201ENST00000438801 AVPP01185 164 aa7.59□□□□□ -1.19
HMGB1P18-201ENST00000438801 PARP9Q8IXQ6 854 aa7.59□□□□□ -1.19
HMGB1P18-201ENST00000438801 MRGPRX2Q96LB1 330 aa7.59□□□□□ -1.19
HMGB1P18-201ENST00000438801 AK7Q96M32 723 aa7.59□□□□□ -1.19
HMGB1P18-201ENST00000438801 POTECB2RU33 542 aa7.58□□□□□ -1.2
HMGB1P18-201ENST00000438801 CRIPAKQ8N1N5 446 aa7.58□□□□□ -1.2
HMGB1P18-201ENST00000438801 SNIP1Q8TAD8 396 aaKnown RBP7.58□□□□□ -1.2
HMGB1P18-201ENST00000438801 WNT7BP56706 349 aa7.57□□□□□ -1.2
HMGB1P18-201ENST00000438801 TBC1D2Q9BYX2 928 aa7.57□□□□□ -1.2
HMGB1P18-201ENST00000438801 AXIN1O15169 862 aa7.56□□□□□ -1.2
HMGB1P18-201ENST00000438801 MS4A1P11836 297 aa7.56□□□□□ -1.2
HMGB1P18-201ENST00000438801 SKOR1P84550 965 aa7.56□□□□□ -1.2
HMGB1P18-201ENST00000438801 MTMR2Q13614 643 aa7.56□□□□□ -1.2
HMGB1P18-201ENST00000438801 DIXDC1Q155Q3 683 aa7.56□□□□□ -1.2
HMGB1P18-201ENST00000438801 CTC1Q2NKJ3 1217 aa7.56□□□□□ -1.2
HMGB1P18-201ENST00000438801 RC3H1Q5TC82 1133 aaKnown RBP7.56□□□□□ -1.2
HMGB1P18-201ENST00000438801 PTCRAQ6ISU1 281 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P18-201ENST00000438801 ZNF775Q96BV0 537 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P18-201ENST00000438801 CCNYL3P0C7X3 344 aa7.55□□□□□ -1.2
HMGB1P18-201ENST00000438801 SMPD1P17405 629 aa7.55□□□□□ -1.2
HMGB1P18-201ENST00000438801 DACH1Q9UI36 760 aa7.55□□□□□ -1.2
HMGB1P18-201ENST00000438801 SPDYE5A6NIY4 337 aa7.54□□□□□ -1.2
HMGB1P18-201ENST00000438801 J3QL48 77 aa7.54□□□□□ -1.2
HMGB1P18-201ENST00000438801 GJA5P36382 358 aa7.54□□□□□ -1.2
HMGB1P18-201ENST00000438801 SMCPP49901 116 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P18-201ENST00000438801 PTPRNQ16849 979 aa7.54□□□□□ -1.2
HMGB1P18-201ENST00000438801 RSBN1LQ6PCB5 846 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P18-201ENST00000438801 PRR7Q8TB68 274 aa7.54□□□□□ -1.2
HMGB1P18-201ENST00000438801 PDE4DQ08499 809 aa7.53□□□□□ -1.2
HMGB1P18-201ENST00000438801 DESI1Q6ICB0 168 aa7.53□□□□□ -1.2
HMGB1P18-201ENST00000438801 EVA1BQ9NVM1 165 aa7.53□□□□□ -1.2
HMGB1P18-201ENST00000438801 SLC24A3Q9HC58 644 aa7.52□□□□□ -1.21
HMGB1P18-201ENST00000438801 PCDHB15Q9Y5E8 787 aa7.52□□□□□ -1.21
HMGB1P18-201ENST00000438801 SPTLC1O15269 473 aa7.51□□□□□ -1.21
HMGB1P18-201ENST00000438801 KCNH2Q12809 1159 aa7.51□□□□□ -1.21
HMGB1P18-201ENST00000438801 EHBP1Q8NDI1 1231 aa7.51□□□□□ -1.21
HMGB1P18-201ENST00000438801 UNC93B1Q9H1C4 597 aa7.51□□□□□ -1.21
HMGB1P18-201ENST00000438801 SH3BP2P78314 561 aa7.5□□□□□ -1.21
HMGB1P18-201ENST00000438801 RIC3Q7Z5B4 369 aa7.5□□□□□ -1.21
HMGB1P18-201ENST00000438801 HPS1Q92902 700 aa7.5□□□□□ -1.21
HMGB1P18-201ENST00000438801 GMPR2Q9P2T1 348 aaKnown RBP7.5□□□□□ -1.21
HMGB1P18-201ENST00000438801 SIAH2O43255 324 aa7.49□□□□□ -1.21
HMGB1P18-201ENST00000438801 ALDH1A1P00352 501 aa7.49□□□□□ -1.21
HMGB1P18-201ENST00000438801 HRCP23327 699 aa7.49□□□□□ -1.21
HMGB1P18-201ENST00000438801 ZBTB3Q9H5J0 574 aa7.49□□□□□ -1.21
HMGB1P18-201ENST00000438801 C11orf95C9JLR9 678 aaPredicted RBP7.48□□□□□ -1.21
HMGB1P18-201ENST00000438801 CFAP99D6REC4 459 aa7.48□□□□□ -1.21
HMGB1P18-201ENST00000438801 PRPF38BQ5VTL8 546 aaKnown RBP7.48□□□□□ -1.21
HMGB1P18-201ENST00000438801 LYPD8Q6UX82 237 aa7.48□□□□□ -1.21
HMGB1P18-201ENST00000438801 BAP1Q92560 729 aa7.48□□□□□ -1.21
HMGB1P18-201ENST00000438801 CSPP1Q1MSJ5 1256 aa7.47□□□□□ -1.21
HMGB1P18-201ENST00000438801 LINC01559Q495D7 138 aa7.47□□□□□ -1.21
HMGB1P18-201ENST00000438801 CTHP32929 405 aa7.46□□□□□ -1.22
HMGB1P18-201ENST00000438801 MYSM1Q5VVJ2 828 aa7.46□□□□□ -1.22
HMGB1P18-201ENST00000438801 CABLES1Q8TDN4 633 aa7.46□□□□□ -1.22
HMGB1P18-201ENST00000438801 ATP13A2Q9NQ11 1180 aa7.46□□□□□ -1.22
HMGB1P18-201ENST00000438801 ZNF511Q8NB15 262 aa7.45□□□□□ -1.22
HMGB1P18-201ENST00000438801 LIMD1Q9UGP4 676 aa7.45□□□□□ -1.22
HMGB1P18-201ENST00000438801 TUSC1Q2TAM9 212 aa7.44□□□□□ -1.22
HMGB1P18-201ENST00000438801 WASF2Q9Y6W5 498 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms