RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 MARF1Q9Y4F3 1742 aaKnown RBP27.15■■□□□ 1.94
GTF3A-204ENST00000438571 TECPR2O15040 1411 aa27.14■■□□□ 1.93
GTF3A-204ENST00000438571 SOS2Q07890 1332 aaPredicted RBP27.13■■□□□ 1.93
GTF3A-204ENST00000438571 PLEKHH1Q9ULM0 1364 aa27.12■■□□□ 1.93
GTF3A-204ENST00000438571 C8orf37Q96NL8 207 aa27.12■■□□□ 1.93
GTF3A-204ENST00000438571 ANKRD30BQ9BXX2 1392 aa27.11■■□□□ 1.93
GTF3A-204ENST00000438571 STK26Q9P289 416 aa27.11■■□□□ 1.93
GTF3A-204ENST00000438571 LRPPRCP42704 1394 aaKnown RBP27.1■■□□□ 1.93
GTF3A-204ENST00000438571 TMEM132EQ6IEE7 984 aa27.09■■□□□ 1.93
GTF3A-204ENST00000438571 WAPLQ7Z5K2 1190 aa27.09■■□□□ 1.93
GTF3A-204ENST00000438571 PXDNQ92626 1479 aa27.08■■□□□ 1.93
GTF3A-204ENST00000438571 CDK12Q9NYV4 1490 aaPredicted RBP27.07■■□□□ 1.92
GTF3A-204ENST00000438571 RXRBP28702 533 aa27.07■■□□□ 1.92
GTF3A-204ENST00000438571 RGS12O14924 1447 aa27.07■■□□□ 1.92
GTF3A-204ENST00000438571 ADAMTS2O95450 1211 aa27.06■■□□□ 1.92
GTF3A-204ENST00000438571 YTHDC2Q9H6S0 1430 aaKnown RBP27.06■■□□□ 1.92
GTF3A-204ENST00000438571 NUTM2FA1L443 756 aa27.05■■□□□ 1.92
GTF3A-204ENST00000438571 NRXN1Q9ULB1 1477 aa27.05■■□□□ 1.92
GTF3A-204ENST00000438571 ABCC11Q96J66 1382 aa27.04■■□□□ 1.92
GTF3A-204ENST00000438571 RAB3GAP2Q9H2M9 1393 aa27.04■■□□□ 1.92
GTF3A-204ENST00000438571 KIF1AQ12756 1690 aa27.04■■□□□ 1.92
GTF3A-204ENST00000438571 MYOM2P54296 1465 aa27.03■■□□□ 1.92
GTF3A-204ENST00000438571 ESCO1Q5FWF5 840 aa27.03■■□□□ 1.92
GTF3A-204ENST00000438571 UPF1Q92900 1129 aaKnown RBP eCLIP27.03■■□□□ 1.92
GTF3A-204ENST00000438571 XPCQ01831 940 aaPredicted RBP27.01■■□□□ 1.91
GTF3A-204ENST00000438571 QTRT2Q9H974 415 aaKnown RBP26.98■■□□□ 1.91
GTF3A-204ENST00000438571 NPHP3Q7Z494 1330 aa26.97■■□□□ 1.91
GTF3A-204ENST00000438571 NGLY1Q96IV0 654 aa26.97■■□□□ 1.91
GTF3A-204ENST00000438571 FOXO3O43524 673 aa26.96■■□□□ 1.91
GTF3A-204ENST00000438571 CFAP70Q5T0N1 1121 aa26.96■■□□□ 1.91
GTF3A-204ENST00000438571 USP32Q8NFA0 1604 aa26.95■■□□□ 1.91
GTF3A-204ENST00000438571 ABCA3Q99758 1704 aa26.94■■□□□ 1.9
GTF3A-204ENST00000438571 RBM6P78332 1123 aaKnown RBP26.94■■□□□ 1.9
GTF3A-204ENST00000438571 C14orf93Q9H972 538 aaKnown RBP26.94■■□□□ 1.9
GTF3A-204ENST00000438571 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.93■■□□□ 1.9
GTF3A-204ENST00000438571 ADGRB1O14514 1584 aa26.92■■□□□ 1.9
GTF3A-204ENST00000438571 USP21Q9UK80 565 aa26.91■■□□□ 1.9
GTF3A-204ENST00000438571 ATRNO75882 1429 aa26.9■■□□□ 1.9
GTF3A-204ENST00000438571 DLC1Q96QB1 1528 aa26.89■■□□□ 1.89
GTF3A-204ENST00000438571 ADGRB2O60241 1585 aa26.88■■□□□ 1.89
GTF3A-204ENST00000438571 DHX57Q6P158 1386 aaKnown RBP26.87■■□□□ 1.89
GTF3A-204ENST00000438571 SAFB2Q14151 953 aaKnown RBP eCLIP26.87■■□□□ 1.89
GTF3A-204ENST00000438571 FNBP4Q8N3X1 1017 aaPredicted RBP26.87■■□□□ 1.89
GTF3A-204ENST00000438571 ACIN1Q9UKV3 1341 aaKnown RBP26.87■■□□□ 1.89
GTF3A-204ENST00000438571 BCL9LQ86UU0 1499 aa26.87■■□□□ 1.89
GTF3A-204ENST00000438571 PLCH1Q4KWH8 1693 aa26.85■■□□□ 1.89
GTF3A-204ENST00000438571 SIRT1Q96EB6 747 aa26.84■■□□□ 1.89
GTF3A-204ENST00000438571 PRAM1Q96QH2 718 aa26.84■■□□□ 1.89
GTF3A-204ENST00000438571 TRPC5Q9UL62 973 aaPredicted RBP26.84■■□□□ 1.89
GTF3A-204ENST00000438571 ARHGEF28Q8N1W1 1705 aaKnown RBP26.84■■□□□ 1.89
GTF3A-204ENST00000438571 BRWD3Q6RI45 1802 aa26.83■■□□□ 1.89
GTF3A-204ENST00000438571 TRPM3Q9HCF6 1732 aaPredicted RBP26.83■■□□□ 1.89
GTF3A-204ENST00000438571 SPATA31A3Q5VYP0 1347 aa26.83■■□□□ 1.89
GTF3A-204ENST00000438571 GLI3P10071 1580 aa26.81■■□□□ 1.88
GTF3A-204ENST00000438571 TNS3Q68CZ2 1445 aa26.8■■□□□ 1.88
GTF3A-204ENST00000438571 KRT28Q7Z3Y7 464 aa26.79■■□□□ 1.88
GTF3A-204ENST00000438571 PHF8Q9UPP1 1060 aa26.79■■□□□ 1.88
GTF3A-204ENST00000438571 SLIT2O94813 1529 aa26.78■■□□□ 1.88
GTF3A-204ENST00000438571 ALS2Q96Q42 1657 aa26.77■■□□□ 1.88
GTF3A-204ENST00000438571 NWD2Q9ULI1 1742 aa26.76■■□□□ 1.88
GTF3A-204ENST00000438571 KDM2AQ9Y2K7 1162 aa26.76■■□□□ 1.87
GTF3A-204ENST00000438571 EP400Q96L91 3159 aa26.75■■□□□ 1.87
GTF3A-204ENST00000438571 TRAK1Q9UPV9 953 aa26.75■■□□□ 1.87
GTF3A-204ENST00000438571 ANKARQ7Z5J8 1434 aa26.74■■□□□ 1.87
GTF3A-204ENST00000438571 CRYBG1Q9Y4K1 1723 aa26.74■■□□□ 1.87
GTF3A-204ENST00000438571 PLEKHG5O94827 1062 aa26.74■■□□□ 1.87
GTF3A-204ENST00000438571 POGKQ9P215 609 aa26.74■■□□□ 1.87
GTF3A-204ENST00000438571 ATAD2Q6PL18 1390 aa26.73■■□□□ 1.87
GTF3A-204ENST00000438571 CABLES1Q8TDN4 633 aa26.73■■□□□ 1.87
GTF3A-204ENST00000438571 DCAF11Q8TEB1 546 aa26.73■■□□□ 1.87
GTF3A-204ENST00000438571 HIRIP3Q9BW71 556 aaPredicted RBP26.73■■□□□ 1.87
GTF3A-204ENST00000438571 TULP4Q9NRJ4 1543 aa26.72■■□□□ 1.87
GTF3A-204ENST00000438571 PMFBP1Q8TBY8 1022 aa26.72■■□□□ 1.87
GTF3A-204ENST00000438571 ITSN1Q15811 1721 aa26.72■■□□□ 1.87
GTF3A-204ENST00000438571 NRAPQ86VF7 1730 aa26.72■■□□□ 1.87
GTF3A-204ENST00000438571 RALGAPBQ86X10 1494 aa26.71■■□□□ 1.87
GTF3A-204ENST00000438571 MINK1Q8N4C8 1332 aaPredicted RBP26.7■■□□□ 1.87
GTF3A-204ENST00000438571 PRR36Q9H6K5 1346 aa26.7■■□□□ 1.87
GTF3A-204ENST00000438571 SBNO1A3KN83 1393 aa26.7■■□□□ 1.86
GTF3A-204ENST00000438571 GJD4Q96KN9 370 aaPredicted RBP26.69■■□□□ 1.86
GTF3A-204ENST00000438571 KIAA1210Q9ULL0 1709 aa26.67■■□□□ 1.86
GTF3A-204ENST00000438571 UNC5CLQ8IV45 518 aa26.66■■□□□ 1.86
GTF3A-204ENST00000438571 PSME1Q06323 249 aa26.65■■□□□ 1.86
GTF3A-204ENST00000438571 LMOD2Q6P5Q4 547 aa26.65■■□□□ 1.86
GTF3A-204ENST00000438571 TOPAZ1Q8N9V7 1692 aa26.64■■□□□ 1.86
GTF3A-204ENST00000438571 ARHGEF10O15013 1369 aa26.63■■□□□ 1.85
GTF3A-204ENST00000438571 HAP1P54257 671 aaPredicted RBP26.63■■□□□ 1.85
GTF3A-204ENST00000438571 HRCP23327 699 aa26.62■■□□□ 1.85
GTF3A-204ENST00000438571 ATP7BP35670 1465 aa26.62■■□□□ 1.85
GTF3A-204ENST00000438571 PHRF1Q9P1Y6 1649 aaKnown RBP26.61■■□□□ 1.85
GTF3A-204ENST00000438571 COL14A1Q05707 1796 aaKnown RBP26.61■■□□□ 1.85
GTF3A-204ENST00000438571 WASLO00401 505 aaPredicted RBP26.59■■□□□ 1.85
GTF3A-204ENST00000438571 EIF3AQ14152 1382 aaKnown RBP26.58■■□□□ 1.84
GTF3A-204ENST00000438571 FAM83GA6ND36 823 aa26.54■■□□□ 1.84
GTF3A-204ENST00000438571 VPS72Q15906 364 aa26.54■■□□□ 1.84
GTF3A-204ENST00000438571 GPRASP1Q5JY77 1395 aa26.54■■□□□ 1.84
GTF3A-204ENST00000438571 STAC3Q96MF2 364 aa26.53■■□□□ 1.84
GTF3A-204ENST00000438571 QRICH2Q9H0J4 1663 aa26.51■■□□□ 1.83
GTF3A-204ENST00000438571 SEPT12Q8IYM1 358 aa26.5■■□□□ 1.83
GTF3A-204ENST00000438571 CCDC9Q9Y3X0 531 aaKnown RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 193.1 ms