RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 DCCP43146 1447 aa23.12■■□□□ 1.29
SNRPB-202ENST00000438552 TOM1O60784 492 aa23.1■■□□□ 1.29
SNRPB-202ENST00000438552 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
SNRPB-202ENST00000438552 QRICH2Q9H0J4 1663 aa23.09■■□□□ 1.29
SNRPB-202ENST00000438552 C19orf44Q9H6X5 657 aa23.09■■□□□ 1.29
SNRPB-202ENST00000438552 TIMELESSQ9UNS1 1208 aa23.09■■□□□ 1.29
SNRPB-202ENST00000438552 GPRASP1Q5JY77 1395 aa23.09■■□□□ 1.29
SNRPB-202ENST00000438552 ADGRB2O60241 1585 aa23.09■■□□□ 1.29
SNRPB-202ENST00000438552 SAFB2Q14151 953 aaKnown RBP eCLIP23.08■■□□□ 1.29
SNRPB-202ENST00000438552 ROBO1Q9Y6N7 1651 aa23.08■■□□□ 1.29
SNRPB-202ENST00000438552 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.28
SNRPB-202ENST00000438552 PIP4K2BP78356 416 aa23.07■■□□□ 1.28
SNRPB-202ENST00000438552 SIRT1Q96EB6 747 aa23.07■■□□□ 1.28
SNRPB-202ENST00000438552 SCAF1Q9H7N4 1312 aaKnown RBP23.07■■□□□ 1.28
SNRPB-202ENST00000438552 POGKQ9P215 609 aa23.06■■□□□ 1.28
SNRPB-202ENST00000438552 ATF3P18847 181 aa23.05■■□□□ 1.28
SNRPB-202ENST00000438552 MST1RQ04912 1400 aa23.05■■□□□ 1.28
SNRPB-202ENST00000438552 CADPS2Q86UW7 1296 aa23.04■■□□□ 1.28
SNRPB-202ENST00000438552 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
SNRPB-202ENST00000438552 RGPD8O14715 1765 aaPredicted RBP23■■□□□ 1.27
SNRPB-202ENST00000438552 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
SNRPB-202ENST00000438552 SLAIN2Q9P270 581 aa22.99■■□□□ 1.27
SNRPB-202ENST00000438552 C1orf167Q5SNV9 1468 aa22.98■■□□□ 1.27
SNRPB-202ENST00000438552 USP32Q8NFA0 1604 aa22.98■■□□□ 1.27
SNRPB-202ENST00000438552 HIRIP3Q9BW71 556 aaPredicted RBP22.98■■□□□ 1.27
SNRPB-202ENST00000438552 CENPJQ9HC77 1338 aaPredicted RBP22.98■■□□□ 1.27
SNRPB-202ENST00000438552 EIF3AQ14152 1382 aaKnown RBP22.98■■□□□ 1.27
SNRPB-202ENST00000438552 PHLPP1O60346 1717 aa22.94■■□□□ 1.26
SNRPB-202ENST00000438552 NHSL1Q5SYE7 1610 aa22.94■■□□□ 1.26
SNRPB-202ENST00000438552 TULP4Q9NRJ4 1543 aa22.94■■□□□ 1.26
SNRPB-202ENST00000438552 NUTM2FA1L443 756 aa22.93■■□□□ 1.26
SNRPB-202ENST00000438552 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
SNRPB-202ENST00000438552 AHDC1Q5TGY3 1603 aaPredicted RBP22.91■■□□□ 1.26
SNRPB-202ENST00000438552 BRINP3Q76B58 766 aa22.91■■□□□ 1.26
SNRPB-202ENST00000438552 KIF1AQ12756 1690 aa22.9■■□□□ 1.26
SNRPB-202ENST00000438552 TOPAZ1Q8N9V7 1692 aa22.9■■□□□ 1.26
SNRPB-202ENST00000438552 USP47Q96K76 1375 aa22.89■■□□□ 1.26
SNRPB-202ENST00000438552 ANKARQ7Z5J8 1434 aa22.89■■□□□ 1.25
SNRPB-202ENST00000438552 ATP7BP35670 1465 aa22.88■■□□□ 1.25
SNRPB-202ENST00000438552 WASLO00401 505 aaPredicted RBP22.88■■□□□ 1.25
SNRPB-202ENST00000438552 COL16A1Q07092 1604 aaPredicted RBP22.88■■□□□ 1.25
SNRPB-202ENST00000438552 HSPA1LP34931 641 aa22.87■■□□□ 1.25
SNRPB-202ENST00000438552 ORAI2Q96SN7 254 aa22.87■■□□□ 1.25
SNRPB-202ENST00000438552 PRR36Q9H6K5 1346 aa22.85■■□□□ 1.25
SNRPB-202ENST00000438552 SBNO2Q9Y2G9 1366 aa22.85■■□□□ 1.25
SNRPB-202ENST00000438552 ESCO1Q5FWF5 840 aa22.83■■□□□ 1.25
SNRPB-202ENST00000438552 CDK19Q9BWU1 502 aa22.83■■□□□ 1.25
SNRPB-202ENST00000438552 DDX17Q92841 729 aaKnown RBP22.82■■□□□ 1.24
SNRPB-202ENST00000438552 ST20-MTHFSA0A0A6YYL1 179 aa22.81■■□□□ 1.24
SNRPB-202ENST00000438552 EVC2Q86UK5 1308 aa22.8■■□□□ 1.24
SNRPB-202ENST00000438552 SRPK2P78362 688 aaKnown RBP22.79■■□□□ 1.24
SNRPB-202ENST00000438552 CABP2Q9NPB3 220 aa22.78■■□□□ 1.24
SNRPB-202ENST00000438552 PXDNQ92626 1479 aa22.78■■□□□ 1.24
SNRPB-202ENST00000438552 NUDT16Q96DE0 195 aaKnown RBP22.77■■□□□ 1.24
SNRPB-202ENST00000438552 TESK2Q96S53 571 aa22.77■■□□□ 1.24
SNRPB-202ENST00000438552 PHF8Q9UPP1 1060 aa22.77■■□□□ 1.24
SNRPB-202ENST00000438552 SHPRHQ149N8 1683 aa22.75■■□□□ 1.23
SNRPB-202ENST00000438552 PMFBP1Q8TBY8 1022 aa22.75■■□□□ 1.23
SNRPB-202ENST00000438552 NPHP3Q7Z494 1330 aa22.74■■□□□ 1.23
SNRPB-202ENST00000438552 TRPM3Q9HCF6 1732 aaPredicted RBP22.74■■□□□ 1.23
SNRPB-202ENST00000438552 PPIP5K1Q6PFW1 1433 aa22.74■■□□□ 1.23
SNRPB-202ENST00000438552 FOXO3O43524 673 aa22.73■■□□□ 1.23
SNRPB-202ENST00000438552 XPCQ01831 940 aaPredicted RBP22.73■■□□□ 1.23
SNRPB-202ENST00000438552 HSPA5P11021 654 aaKnown RBP22.7■■□□□ 1.22
SNRPB-202ENST00000438552 EIF4G2P78344 907 aaKnown RBP eCLIP22.7■■□□□ 1.22
SNRPB-202ENST00000438552 CCDC61Q9Y6R9 512 aa22.7■■□□□ 1.22
SNRPB-202ENST00000438552 SOS2Q07890 1332 aaPredicted RBP22.7■■□□□ 1.22
SNRPB-202ENST00000438552 AKAP12Q02952 1782 aa22.7■■□□□ 1.22
SNRPB-202ENST00000438552 ATAD2Q6PL18 1390 aa22.69■■□□□ 1.22
SNRPB-202ENST00000438552 JCADQ9P266 1359 aa22.67■■□□□ 1.22
SNRPB-202ENST00000438552 MYOM1P52179 1685 aa22.67■■□□□ 1.22
SNRPB-202ENST00000438552 ALS2Q96Q42 1657 aa22.67■■□□□ 1.22
SNRPB-202ENST00000438552 POLR3AO14802 1390 aaPredicted RBP22.66■■□□□ 1.22
SNRPB-202ENST00000438552 NGDNQ8NEJ9 315 aaKnown RBP22.66■■□□□ 1.22
SNRPB-202ENST00000438552 COL22A1Q8NFW1 1626 aaPredicted RBP22.66■■□□□ 1.22
SNRPB-202ENST00000438552 TMF1P82094 1093 aa22.65■■□□□ 1.22
SNRPB-202ENST00000438552 KRT28Q7Z3Y7 464 aa22.65■■□□□ 1.22
SNRPB-202ENST00000438552 MON2Q7Z3U7 1717 aa22.65■■□□□ 1.22
SNRPB-202ENST00000438552 PNPLA6Q8IY17 1366 aa22.64■■□□□ 1.22
SNRPB-202ENST00000438552 ACEP12821 1306 aa22.64■■□□□ 1.22
SNRPB-202ENST00000438552 PLEKHG3A1L390 1219 aa22.64■■□□□ 1.21
SNRPB-202ENST00000438552 TNS3Q68CZ2 1445 aa22.64■■□□□ 1.21
SNRPB-202ENST00000438552 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
SNRPB-202ENST00000438552 NRKQ7Z2Y5 1582 aa22.63■■□□□ 1.21
SNRPB-202ENST00000438552 PSME1Q06323 249 aa22.63■■□□□ 1.21
SNRPB-202ENST00000438552 LRRC59Q96AG4 307 aaKnown RBP22.63■■□□□ 1.21
SNRPB-202ENST00000438552 CABP1Q9NZU7 370 aa22.63■■□□□ 1.21
SNRPB-202ENST00000438552 ABCA3Q99758 1704 aa22.62■■□□□ 1.21
SNRPB-202ENST00000438552 SLC24A1O60721 1099 aa22.62■■□□□ 1.21
SNRPB-202ENST00000438552 SBNO1A3KN83 1393 aa22.61■■□□□ 1.21
SNRPB-202ENST00000438552 CD163L1Q9NR16 1453 aa22.6■■□□□ 1.21
SNRPB-202ENST00000438552 SPATA31A3Q5VYP0 1347 aa22.59■■□□□ 1.21
SNRPB-202ENST00000438552 USP6P35125 1406 aa22.59■■□□□ 1.21
SNRPB-202ENST00000438552 PUS7Q96PZ0 661 aaKnown RBP22.59■■□□□ 1.21
SNRPB-202ENST00000438552 LRP6O75581 1613 aa22.59■■□□□ 1.21
SNRPB-202ENST00000438552 CRYBG1Q9Y4K1 1723 aa22.58■■□□□ 1.21
SNRPB-202ENST00000438552 TMC1Q8TDI8 760 aa22.58■■□□□ 1.21
SNRPB-202ENST00000438552 CPSF1Q10570 1443 aaKnown RBP22.57■■□□□ 1.2
SNRPB-202ENST00000438552 PIK3C2AO00443 1686 aa22.55■■□□□ 1.2
SNRPB-202ENST00000438552 NINLQ9Y2I6 1382 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms