RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 SEPT12Q8IYM1 358 aa13.28□□□□□ -0.28
SCRN1-208ENST00000438497 EP400Q96L91 3159 aa13.28□□□□□ -0.28
SCRN1-208ENST00000438497 VGFO15240 615 aaPredicted RBP13.27□□□□□ -0.29
SCRN1-208ENST00000438497 IQGAP3Q86VI3 1631 aa13.27□□□□□ -0.29
SCRN1-208ENST00000438497 COL22A1Q8NFW1 1626 aaPredicted RBP13.27□□□□□ -0.29
SCRN1-208ENST00000438497 HRCP23327 699 aa13.26□□□□□ -0.29
SCRN1-208ENST00000438497 MYOM2P54296 1465 aa13.26□□□□□ -0.29
SCRN1-208ENST00000438497 ROBO2Q9HCK4 1378 aa13.26□□□□□ -0.29
SCRN1-208ENST00000438497 MARF1Q9Y4F3 1742 aaKnown RBP13.25□□□□□ -0.29
SCRN1-208ENST00000438497 RALGAPBQ86X10 1494 aa13.24□□□□□ -0.29
SCRN1-208ENST00000438497 BAG6P46379 1132 aa13.24□□□□□ -0.29
SCRN1-208ENST00000438497 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
SCRN1-208ENST00000438497 CCDC9Q9Y3X0 531 aaKnown RBP13.24□□□□□ -0.29
SCRN1-208ENST00000438497 BRWD3Q6RI45 1802 aa13.24□□□□□ -0.29
SCRN1-208ENST00000438497 LRPPRCP42704 1394 aaKnown RBP13.23□□□□□ -0.29
SCRN1-208ENST00000438497 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
SCRN1-208ENST00000438497 ONECUT3O60422 494 aaPredicted RBP13.23□□□□□ -0.29
SCRN1-208ENST00000438497 ITGAEP38570 1179 aa13.23□□□□□ -0.29
SCRN1-208ENST00000438497 ROCK1Q13464 1354 aa13.22□□□□□ -0.29
SCRN1-208ENST00000438497 LRP5O75197 1615 aa13.22□□□□□ -0.29
SCRN1-208ENST00000438497 HAP1P54257 671 aaPredicted RBP13.22□□□□□ -0.29
SCRN1-208ENST00000438497 GLI3P10071 1580 aa13.21□□□□□ -0.29
SCRN1-208ENST00000438497 VPS72Q15906 364 aa13.21□□□□□ -0.29
SCRN1-208ENST00000438497 SLIT2O94813 1529 aa13.21□□□□□ -0.29
SCRN1-208ENST00000438497 SPHKAPQ2M3C7 1700 aa13.21□□□□□ -0.3
SCRN1-208ENST00000438497 HFM1A2PYH4 1435 aa13.21□□□□□ -0.3
SCRN1-208ENST00000438497 NEXMIFQ5QGS0 1516 aa13.2□□□□□ -0.3
SCRN1-208ENST00000438497 KRT28Q7Z3Y7 464 aa13.2□□□□□ -0.3
SCRN1-208ENST00000438497 PXDNQ92626 1479 aa13.2□□□□□ -0.3
SCRN1-208ENST00000438497 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.19□□□□□ -0.3
SCRN1-208ENST00000438497 SPATA31A3Q5VYP0 1347 aa13.19□□□□□ -0.3
SCRN1-208ENST00000438497 A0A0G2JS52 829 aa13.19□□□□□ -0.3
SCRN1-208ENST00000438497 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
SCRN1-208ENST00000438497 MYT1Q01538 1121 aa13.19□□□□□ -0.3
SCRN1-208ENST00000438497 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
SCRN1-208ENST00000438497 R3HDM1Q15032 1099 aaKnown RBP13.18□□□□□ -0.3
SCRN1-208ENST00000438497 KIF1BO60333 1816 aa13.18□□□□□ -0.3
SCRN1-208ENST00000438497 RPGRIP1LQ68CZ1 1315 aa13.17□□□□□ -0.3
SCRN1-208ENST00000438497 WAPLQ7Z5K2 1190 aa13.17□□□□□ -0.3
SCRN1-208ENST00000438497 CABLES1Q8TDN4 633 aa13.17□□□□□ -0.3
SCRN1-208ENST00000438497 STK26Q9P289 416 aa13.17□□□□□ -0.3
SCRN1-208ENST00000438497 YY1P25490 414 aa13.16□□□□□ -0.3
SCRN1-208ENST00000438497 PSME1Q06323 249 aa13.16□□□□□ -0.3
SCRN1-208ENST00000438497 LMOD2Q6P5Q4 547 aa13.15□□□□□ -0.3
SCRN1-208ENST00000438497 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
SCRN1-208ENST00000438497 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
SCRN1-208ENST00000438497 FAM98CQ17RN3 349 aaKnown RBP13.14□□□□□ -0.31
SCRN1-208ENST00000438497 NAIPQ13075 1403 aa13.13□□□□□ -0.31
SCRN1-208ENST00000438497 PRAG1Q86YV5 1406 aa13.13□□□□□ -0.31
SCRN1-208ENST00000438497 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
SCRN1-208ENST00000438497 CDC42BPGQ6DT37 1551 aa13.11□□□□□ -0.31
SCRN1-208ENST00000438497 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
SCRN1-208ENST00000438497 USP32Q8NFA0 1604 aa13.1□□□□□ -0.31
SCRN1-208ENST00000438497 EZH2Q15910 746 aaKnown RBP13.1□□□□□ -0.31
SCRN1-208ENST00000438497 TMEM132EQ6IEE7 984 aa13.1□□□□□ -0.31
SCRN1-208ENST00000438497 CCDC144AA2RUR9 1427 aa13.1□□□□□ -0.31
SCRN1-208ENST00000438497 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
SCRN1-208ENST00000438497 BTG4Q9NY30 223 aa13.09□□□□□ -0.31
SCRN1-208ENST00000438497 NWD2Q9ULI1 1742 aa13.08□□□□□ -0.32
SCRN1-208ENST00000438497 ADGRF5Q8IZF2 1346 aa13.08□□□□□ -0.32
SCRN1-208ENST00000438497 CAMKK2Q96RR4 588 aa13.07□□□□□ -0.32
SCRN1-208ENST00000438497 ABCC11Q96J66 1382 aa13.07□□□□□ -0.32
SCRN1-208ENST00000438497 PLEKHH1Q9ULM0 1364 aa13.07□□□□□ -0.32
SCRN1-208ENST00000438497 TNS3Q68CZ2 1445 aa13.06□□□□□ -0.32
SCRN1-208ENST00000438497 PLCH1Q4KWH8 1693 aa13.06□□□□□ -0.32
SCRN1-208ENST00000438497 RGL3Q3MIN7 710 aa13.06□□□□□ -0.32
SCRN1-208ENST00000438497 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
SCRN1-208ENST00000438497 PPLO60437 1756 aa13.05□□□□□ -0.32
SCRN1-208ENST00000438497 TRIM37O94972 964 aa13.05□□□□□ -0.32
SCRN1-208ENST00000438497 APBA3O96018 575 aa13.05□□□□□ -0.32
SCRN1-208ENST00000438497 KIF1AQ12756 1690 aa13.05□□□□□ -0.32
SCRN1-208ENST00000438497 SBNO1A3KN83 1393 aa13.05□□□□□ -0.32
SCRN1-208ENST00000438497 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
SCRN1-208ENST00000438497 RGPD8O14715 1765 aaPredicted RBP13.04□□□□□ -0.32
SCRN1-208ENST00000438497 NBPF8Q3BBV2 869 aa13.04□□□□□ -0.32
SCRN1-208ENST00000438497 NBPF14Q5TI25 921 aa13.04□□□□□ -0.32
SCRN1-208ENST00000438497 FAM196AQ6ZSG2 479 aa13.04□□□□□ -0.32
SCRN1-208ENST00000438497 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
SCRN1-208ENST00000438497 SIRT1Q96EB6 747 aa13.04□□□□□ -0.32
SCRN1-208ENST00000438497 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
SCRN1-208ENST00000438497 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
SCRN1-208ENST00000438497 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
SCRN1-208ENST00000438497 FMN2Q9NZ56 1722 aa13.04□□□□□ -0.32
SCRN1-208ENST00000438497 PPP1R1BQ9UD71 204 aaPredicted RBP13.03□□□□□ -0.32
SCRN1-208ENST00000438497 TECPR2O15040 1411 aa13.03□□□□□ -0.32
SCRN1-208ENST00000438497 PPARGC1BQ86YN6 1023 aaKnown RBP13.02□□□□□ -0.33
SCRN1-208ENST00000438497 DISP2A7MBM2 1401 aa13.02□□□□□ -0.33
SCRN1-208ENST00000438497 SPON1Q9HCB6 807 aa13.01□□□□□ -0.33
SCRN1-208ENST00000438497 SAFB2Q14151 953 aaKnown RBP eCLIP13□□□□□ -0.33
SCRN1-208ENST00000438497 YTHDC2Q9H6S0 1430 aaKnown RBP12.99□□□□□ -0.33
SCRN1-208ENST00000438497 KCNQ2O43526 872 aa12.99□□□□□ -0.33
SCRN1-208ENST00000438497 NRXN1Q9ULB1 1477 aa12.98□□□□□ -0.33
SCRN1-208ENST00000438497 RRBP1Q9P2E9 1410 aaKnown RBP12.98□□□□□ -0.33
SCRN1-208ENST00000438497 PDE3BQ13370 1112 aa12.98□□□□□ -0.33
SCRN1-208ENST00000438497 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
SCRN1-208ENST00000438497 ANKRD30BQ9BXX2 1392 aa12.97□□□□□ -0.33
SCRN1-208ENST00000438497 NRAPQ86VF7 1730 aa12.97□□□□□ -0.33
SCRN1-208ENST00000438497 PRDM11Q9NQV5 511 aa12.97□□□□□ -0.33
SCRN1-208ENST00000438497 POGKQ9P215 609 aa12.97□□□□□ -0.33
SCRN1-208ENST00000438497 COL14A1Q05707 1796 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms