RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 IL27Q8NEV9 243 aa8.09□□□□□ -1.11
TRAPPC13-204ENST00000438419 THAP11Q96EK4 314 aa8.09□□□□□ -1.11
TRAPPC13-204ENST00000438419 DDRGK1Q96HY6 314 aa8.09□□□□□ -1.11
TRAPPC13-204ENST00000438419 PCDHGC3Q9UN70 934 aa8.09□□□□□ -1.11
TRAPPC13-204ENST00000438419 LCE2AQ5TA79 106 aaPredicted RBP8.08□□□□□ -1.12
TRAPPC13-204ENST00000438419 PPP1R18Q6NYC8 613 aa8.08□□□□□ -1.12
TRAPPC13-204ENST00000438419 TLL1O43897 1013 aa8.07□□□□□ -1.12
TRAPPC13-204ENST00000438419 DIXDC1Q155Q3 683 aa8.07□□□□□ -1.12
TRAPPC13-204ENST00000438419 RSBN1LQ6PCB5 846 aaPredicted RBP8.07□□□□□ -1.12
TRAPPC13-204ENST00000438419 SPTLC1O15269 473 aa8.06□□□□□ -1.12
TRAPPC13-204ENST00000438419 FDX1P10109 184 aa8.06□□□□□ -1.12
TRAPPC13-204ENST00000438419 PKDCCQ504Y2 493 aa8.06□□□□□ -1.12
TRAPPC13-204ENST00000438419 BRICD5Q6PL45 260 aa8.06□□□□□ -1.12
TRAPPC13-204ENST00000438419 RNF19BQ6ZMZ0 732 aa8.06□□□□□ -1.12
TRAPPC13-204ENST00000438419 PCDHB15Q9Y5E8 787 aa8.06□□□□□ -1.12
TRAPPC13-204ENST00000438419 GJA5P36382 358 aa8.05□□□□□ -1.12
TRAPPC13-204ENST00000438419 RIC3Q7Z5B4 369 aa8.05□□□□□ -1.12
TRAPPC13-204ENST00000438419 LIMD1Q9UGP4 676 aa8.05□□□□□ -1.12
TRAPPC13-204ENST00000438419 SALL2Q9Y467 1007 aaPredicted RBP8.05□□□□□ -1.12
TRAPPC13-204ENST00000438419 SYMPKQ92797 1274 aaKnown RBP8.04□□□□□ -1.12
TRAPPC13-204ENST00000438419 RSPH6AQ9H0K4 717 aa8.04□□□□□ -1.12
TRAPPC13-204ENST00000438419 POLR3EQ9NVU0 708 aa8.04□□□□□ -1.12
TRAPPC13-204ENST00000438419 MYT1Q01538 1121 aa8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 SH3D19Q5HYK7 790 aa8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 FAM160A2Q8N612 972 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 FMNL1O95466 1100 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 ADH1BP00325 375 aa8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 INSM1Q01101 510 aaPredicted RBP8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 SKIV2LQ15477 1246 aaKnown RBP8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 Q3C1V9 767 aa8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 SPSB2Q99619 263 aa8.03□□□□□ -1.12
TRAPPC13-204ENST00000438419 CLK2P49760 499 aaKnown RBP8.02□□□□□ -1.13
TRAPPC13-204ENST00000438419 PROCA1Q8NCQ7 364 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC13-204ENST00000438419 TUSC1Q2TAM9 212 aa8.01□□□□□ -1.13
TRAPPC13-204ENST00000438419 FBXO31Q5XUX0 539 aaPredicted RBP8.01□□□□□ -1.13
TRAPPC13-204ENST00000438419 DGAT1O75907 488 aa8□□□□□ -1.13
TRAPPC13-204ENST00000438419 WFS1O76024 890 aa8□□□□□ -1.13
TRAPPC13-204ENST00000438419 QPCTQ16769 361 aa8□□□□□ -1.13
TRAPPC13-204ENST00000438419 CSPP1Q1MSJ5 1256 aa8□□□□□ -1.13
TRAPPC13-204ENST00000438419 USB1Q9BQ65 265 aaKnown RBP8□□□□□ -1.13
TRAPPC13-204ENST00000438419 GOPCQ9HD26 462 aa8□□□□□ -1.13
TRAPPC13-204ENST00000438419 C6orf229H3BNL8 230 aa7.99□□□□□ -1.13
TRAPPC13-204ENST00000438419 LILRB3O75022 631 aa7.99□□□□□ -1.13
TRAPPC13-204ENST00000438419 S1PR4O95977 384 aa7.99□□□□□ -1.13
TRAPPC13-204ENST00000438419 HRCP23327 699 aa7.99□□□□□ -1.13
TRAPPC13-204ENST00000438419 CABLES1Q8TDN4 633 aa7.99□□□□□ -1.13
TRAPPC13-204ENST00000438419 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.99□□□□□ -1.13
TRAPPC13-204ENST00000438419 PRDM9Q9NQV7 894 aa7.99□□□□□ -1.13
TRAPPC13-204ENST00000438419 MSS51Q4VC12 460 aa7.98□□□□□ -1.13
TRAPPC13-204ENST00000438419 PRPF38BQ5VTL8 546 aaKnown RBP7.98□□□□□ -1.13
TRAPPC13-204ENST00000438419 RETREG3Q86VR2 466 aa7.98□□□□□ -1.13
TRAPPC13-204ENST00000438419 SLC6A16Q9GZN6 736 aa7.98□□□□□ -1.13
TRAPPC13-204ENST00000438419 MTMR2Q13614 643 aa7.97□□□□□ -1.13
TRAPPC13-204ENST00000438419 TMEM132AQ24JP5 1023 aa7.97□□□□□ -1.13
TRAPPC13-204ENST00000438419 PPEF1O14829 653 aaPredicted RBP7.96□□□□□ -1.13
TRAPPC13-204ENST00000438419 RTL5Q5HYW3 569 aaPredicted RBP7.96□□□□□ -1.13
TRAPPC13-204ENST00000438419 ZBTB3Q9H5J0 574 aa7.96□□□□□ -1.13
TRAPPC13-204ENST00000438419 CFAP99D6REC4 459 aa7.95□□□□□ -1.14
TRAPPC13-204ENST00000438419 RNF223E7ERA6 249 aa7.95□□□□□ -1.14
TRAPPC13-204ENST00000438419 MMP16P51512 607 aa7.95□□□□□ -1.14
TRAPPC13-204ENST00000438419 SPDYE5A6NIY4 337 aa7.95□□□□□ -1.14
TRAPPC13-204ENST00000438419 DXOO77932 396 aaKnown RBP7.95□□□□□ -1.14
TRAPPC13-204ENST00000438419 GGCXP38435 758 aa7.95□□□□□ -1.14
TRAPPC13-204ENST00000438419 PRR7Q8TB68 274 aa7.95□□□□□ -1.14
TRAPPC13-204ENST00000438419 PCMTD1Q96MG8 357 aaPredicted RBP7.94□□□□□ -1.14
TRAPPC13-204ENST00000438419 NUTM2BA6NNL0 878 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC13-204ENST00000438419 NUTM2EB1AL46 878 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC13-204ENST00000438419 WIPF1O43516 503 aa7.93□□□□□ -1.14
TRAPPC13-204ENST00000438419 JUNDP17535 347 aa7.93□□□□□ -1.14
TRAPPC13-204ENST00000438419 NUTM2DQ5VT03 806 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC13-204ENST00000438419 PPP2R2DQ66LE6 453 aa7.93□□□□□ -1.14
TRAPPC13-204ENST00000438419 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC13-204ENST00000438419 PLA2G2CQ5R387 149 aa7.92□□□□□ -1.14
TRAPPC13-204ENST00000438419 TRIM67Q6ZTA4 783 aa7.92□□□□□ -1.14
TRAPPC13-204ENST00000438419 EMID1Q96A84 441 aaPredicted RBP7.92□□□□□ -1.14
TRAPPC13-204ENST00000438419 DESI1Q6ICB0 168 aa7.91□□□□□ -1.14
TRAPPC13-204ENST00000438419 ANKLE1Q8NAG6 615 aa7.91□□□□□ -1.14
TRAPPC13-204ENST00000438419 FAM187AA6NFU0 413 aa7.9□□□□□ -1.14
TRAPPC13-204ENST00000438419 ATP1B4Q9UN42 357 aaPredicted RBP7.9□□□□□ -1.14
TRAPPC13-204ENST00000438419 FCF1Q9Y324 198 aaKnown RBP7.9□□□□□ -1.14
TRAPPC13-204ENST00000438419 SUZ12Q15022 739 aaKnown RBP7.89□□□□□ -1.15
TRAPPC13-204ENST00000438419 RFC5P40937 340 aa7.88□□□□□ -1.15
TRAPPC13-204ENST00000438419 LYPD8Q6UX82 237 aa7.88□□□□□ -1.15
TRAPPC13-204ENST00000438419 ST8SIA5O15466 376 aa7.87□□□□□ -1.15
TRAPPC13-204ENST00000438419 PER1O15534 1290 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC13-204ENST00000438419 CTDSPL2Q05D32 466 aa7.86□□□□□ -1.15
TRAPPC13-204ENST00000438419 PTPRNQ16849 979 aa7.86□□□□□ -1.15
TRAPPC13-204ENST00000438419 LIAT1Q6ZQX7 453 aa7.86□□□□□ -1.15
TRAPPC13-204ENST00000438419 FAM181BA6NEQ2 426 aa7.86□□□□□ -1.15
TRAPPC13-204ENST00000438419 PTCRAQ6ISU1 281 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC13-204ENST00000438419 TSC1Q92574 1164 aa7.86□□□□□ -1.15
TRAPPC13-204ENST00000438419 NUDT12Q9BQG2 462 aa7.86□□□□□ -1.15
TRAPPC13-204ENST00000438419 SLC19A1P41440 591 aa7.85□□□□□ -1.15
TRAPPC13-204ENST00000438419 PRR20EP86478 221 aa7.85□□□□□ -1.15
TRAPPC13-204ENST00000438419 PRR20CP86479 221 aa7.85□□□□□ -1.15
TRAPPC13-204ENST00000438419 PRR20DP86480 221 aa7.85□□□□□ -1.15
TRAPPC13-204ENST00000438419 PRR20BP86481 221 aa7.85□□□□□ -1.15
TRAPPC13-204ENST00000438419 PRR20AP86496 221 aa7.85□□□□□ -1.15
TRAPPC13-204ENST00000438419 NFX1Q12986 1120 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms