RNA–Protein interactions for RNA: ENST00000438393.5

BRD1-204, Transcript of bromodomain containing 1, humanhuman

TSL 2

Gene BRD1, Length 3,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1-204ENST00000438393 NPHP4O75161 1426 aaPredicted RBP17.66■□□□□ 0.42
BRD1-204ENST00000438393 ASXL1Q8IXJ9 1541 aa17.66■□□□□ 0.42
BRD1-204ENST00000438393 YTHDC2Q9H6S0 1430 aaKnown RBP17.66■□□□□ 0.42
BRD1-204ENST00000438393 IPO9Q96P70 1041 aaKnown RBP17.66■□□□□ 0.42
BRD1-204ENST00000438393 NRXN3Q9Y4C0 1643 aa17.65■□□□□ 0.42
BRD1-204ENST00000438393 GPRASP1Q5JY77 1395 aa17.64■□□□□ 0.42
BRD1-204ENST00000438393 ADGRB1O14514 1584 aa17.64■□□□□ 0.41
BRD1-204ENST00000438393 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
BRD1-204ENST00000438393 KDM5AP29375 1690 aaKnown RBP17.63■□□□□ 0.41
BRD1-204ENST00000438393 TBX22Q9Y458 520 aa17.63■□□□□ 0.41
BRD1-204ENST00000438393 PTPRUQ92729 1446 aa17.63■□□□□ 0.41
BRD1-204ENST00000438393 C14orf37Q86TY3 774 aa17.62■□□□□ 0.41
BRD1-204ENST00000438393 TESK2Q96S53 571 aa17.61■□□□□ 0.41
BRD1-204ENST00000438393 PRKRIP1Q9H875 184 aaPredicted RBP17.61■□□□□ 0.41
BRD1-204ENST00000438393 ROBO2Q9HCK4 1378 aa17.61■□□□□ 0.41
BRD1-204ENST00000438393 ZNF335Q9H4Z2 1342 aaPredicted RBP17.6■□□□□ 0.41
BRD1-204ENST00000438393 DISP3Q9P2K9 1392 aa17.6■□□□□ 0.41
BRD1-204ENST00000438393 SETBP1Q9Y6X0 1596 aa17.59■□□□□ 0.41
BRD1-204ENST00000438393 FAM9BQ8IZU0 186 aa17.59■□□□□ 0.41
BRD1-204ENST00000438393 CABP2Q9NPB3 220 aa17.59■□□□□ 0.41
BRD1-204ENST00000438393 IL27Q8NEV9 243 aa17.58■□□□□ 0.41
BRD1-204ENST00000438393 KIF7Q2M1P5 1343 aa17.58■□□□□ 0.41
BRD1-204ENST00000438393 RNF123Q5XPI4 1314 aa17.58■□□□□ 0.4
BRD1-204ENST00000438393 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.4
BRD1-204ENST00000438393 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.4
BRD1-204ENST00000438393 LRPPRCP42704 1394 aaKnown RBP17.57■□□□□ 0.4
BRD1-204ENST00000438393 ANP32AP39687 249 aaKnown RBP17.57■□□□□ 0.4
BRD1-204ENST00000438393 TMC1Q8TDI8 760 aa17.56■□□□□ 0.4
BRD1-204ENST00000438393 TMF1P82094 1093 aa17.56■□□□□ 0.4
BRD1-204ENST00000438393 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
BRD1-204ENST00000438393 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
BRD1-204ENST00000438393 PROSER2Q86WR7 435 aaPredicted RBP17.56■□□□□ 0.4
BRD1-204ENST00000438393 SMG6Q86US8 1419 aaKnown RBP17.56■□□□□ 0.4
BRD1-204ENST00000438393 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
BRD1-204ENST00000438393 MRS2Q9HD23 443 aa17.55■□□□□ 0.4
BRD1-204ENST00000438393 SETD1AO15047 1707 aaKnown RBP17.55■□□□□ 0.4
BRD1-204ENST00000438393 MED14O60244 1454 aa17.54■□□□□ 0.4
BRD1-204ENST00000438393 KIAA1210Q9ULL0 1709 aa17.54■□□□□ 0.4
BRD1-204ENST00000438393 STRCQ7RTU9 1775 aa17.54■□□□□ 0.4
BRD1-204ENST00000438393 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
BRD1-204ENST00000438393 LAMC1P11047 1609 aa17.53■□□□□ 0.4
BRD1-204ENST00000438393 CCDC7Q96M83 1385 aa17.52■□□□□ 0.4
BRD1-204ENST00000438393 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
BRD1-204ENST00000438393 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
BRD1-204ENST00000438393 SLC12A5Q9H2X9 1139 aa17.49■□□□□ 0.39
BRD1-204ENST00000438393 CCDC136Q96JN2 1154 aa17.48■□□□□ 0.39
BRD1-204ENST00000438393 EVC2Q86UK5 1308 aa17.48■□□□□ 0.39
BRD1-204ENST00000438393 QRICH2Q9H0J4 1663 aa17.47■□□□□ 0.39
BRD1-204ENST00000438393 NUDCQ9Y266 331 aa17.46■□□□□ 0.39
BRD1-204ENST00000438393 PLEKHG5O94827 1062 aa17.46■□□□□ 0.38
BRD1-204ENST00000438393 TMEM94Q12767 1356 aa17.46■□□□□ 0.38
BRD1-204ENST00000438393 PMFBP1Q8TBY8 1022 aa17.45■□□□□ 0.38
BRD1-204ENST00000438393 WASLO00401 505 aaPredicted RBP17.45■□□□□ 0.38
BRD1-204ENST00000438393 DMRT2Q9Y5R5 561 aa17.44■□□□□ 0.38
BRD1-204ENST00000438393 RTN4Q9NQC3 1192 aaKnown RBP17.44■□□□□ 0.38
BRD1-204ENST00000438393 CABP1Q9NZU7 370 aa17.44■□□□□ 0.38
BRD1-204ENST00000438393 PANK3Q9H999 370 aa17.43■□□□□ 0.38
BRD1-204ENST00000438393 DIP2AQ14689 1571 aa17.42■□□□□ 0.38
BRD1-204ENST00000438393 USP35Q9P2H5 1018 aa17.42■□□□□ 0.38
BRD1-204ENST00000438393 PIK3R4Q99570 1358 aa17.42■□□□□ 0.38
BRD1-204ENST00000438393 TULP4Q9NRJ4 1543 aa17.42■□□□□ 0.38
BRD1-204ENST00000438393 CHD2O14647 1828 aaKnown RBP17.42■□□□□ 0.38
BRD1-204ENST00000438393 TECPR2O15040 1411 aa17.42■□□□□ 0.38
BRD1-204ENST00000438393 NUDT16Q96DE0 195 aaKnown RBP17.41■□□□□ 0.38
BRD1-204ENST00000438393 STRCP1A6NGW2 1772 aa17.41■□□□□ 0.38
BRD1-204ENST00000438393 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.4■□□□□ 0.38
BRD1-204ENST00000438393 PRR36Q9H6K5 1346 aa17.4■□□□□ 0.38
BRD1-204ENST00000438393 FAM135BQ49AJ0 1406 aa17.4■□□□□ 0.38
BRD1-204ENST00000438393 CPS1P31327 1500 aa17.4■□□□□ 0.38
BRD1-204ENST00000438393 XPCQ01831 940 aaPredicted RBP17.39■□□□□ 0.38
BRD1-204ENST00000438393 CDCA8Q53HL2 280 aa17.39■□□□□ 0.38
BRD1-204ENST00000438393 PTCH1Q13635 1447 aa17.39■□□□□ 0.37
BRD1-204ENST00000438393 XRN1Q8IZH2 1706 aaKnown RBP17.39■□□□□ 0.37
BRD1-204ENST00000438393 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
BRD1-204ENST00000438393 CC2D1BQ5T0F9 858 aaKnown RBP17.38■□□□□ 0.37
BRD1-204ENST00000438393 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
BRD1-204ENST00000438393 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
BRD1-204ENST00000438393 ORAI2Q96SN7 254 aa17.37■□□□□ 0.37
BRD1-204ENST00000438393 NEFMP07197 916 aa17.36■□□□□ 0.37
BRD1-204ENST00000438393 ATF3P18847 181 aa17.36■□□□□ 0.37
BRD1-204ENST00000438393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■■■□□ 17.8
BRD1-204ENST00000438393 SBNO2Q9Y2G9 1366 aa17.36■□□□□ 0.37
BRD1-204ENST00000438393 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
BRD1-204ENST00000438393 UBE2Q2Q8WVN8 375 aa17.35■□□□□ 0.37
BRD1-204ENST00000438393 C19orf44Q9H6X5 657 aa17.35■□□□□ 0.37
BRD1-204ENST00000438393 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.35■□□□□ 0.37
BRD1-204ENST00000438393 CCDC61Q9Y6R9 512 aa17.34■□□□□ 0.37
BRD1-204ENST00000438393 TNNT2P45379 298 aaPredicted RBP17.34■□□□□ 0.37
BRD1-204ENST00000438393 NGDNQ8NEJ9 315 aaKnown RBP17.34■□□□□ 0.37
BRD1-204ENST00000438393 CARD14Q9BXL6 1004 aa17.34■□□□□ 0.37
BRD1-204ENST00000438393 LAS1LQ9Y4W2 734 aaKnown RBP17.34■□□□□ 0.37
BRD1-204ENST00000438393 KNDC1Q76NI1 1749 aa17.33■□□□□ 0.37
BRD1-204ENST00000438393 FOXO3O43524 673 aa17.33■□□□□ 0.37
BRD1-204ENST00000438393 PPIP5K1Q6PFW1 1433 aa17.32■□□□□ 0.36
BRD1-204ENST00000438393 TCERG1O14776 1098 aaKnown RBP17.32■□□□□ 0.36
BRD1-204ENST00000438393 ADGRL3Q9HAR2 1447 aa17.32■□□□□ 0.36
BRD1-204ENST00000438393 NALCNQ8IZF0 1738 aa17.31■□□□□ 0.36
BRD1-204ENST00000438393 KNSTRNQ9Y448 316 aa17.31■□□□□ 0.36
BRD1-204ENST00000438393 MSH6P52701 1360 aa17.31■□□□□ 0.36
BRD1-204ENST00000438393 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms