RNA–Protein interactions for RNA: ENST00000436654.1

CTDSPL-205, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-205ENST00000436654 LRPPRCP42704 1394 aaKnown RBP13.18□□□□□ -0.3
CTDSPL-205ENST00000436654 RAB3GAP2Q9H2M9 1393 aa13.18□□□□□ -0.3
CTDSPL-205ENST00000436654 ADAMTS2O95450 1211 aa13.17□□□□□ -0.3
CTDSPL-205ENST00000436654 RXRBP28702 533 aa13.17□□□□□ -0.3
CTDSPL-205ENST00000436654 PLEKHH1Q9ULM0 1364 aa13.17□□□□□ -0.3
CTDSPL-205ENST00000436654 SOS2Q07890 1332 aaPredicted RBP13.16□□□□□ -0.3
CTDSPL-205ENST00000436654 PIK3C2GO75747 1445 aa13.16□□□□□ -0.3
CTDSPL-205ENST00000436654 ACIN1Q9UKV3 1341 aaKnown RBP13.15□□□□□ -0.3
CTDSPL-205ENST00000436654 XPCQ01831 940 aaPredicted RBP13.15□□□□□ -0.3
CTDSPL-205ENST00000436654 ABCC11Q96J66 1382 aa13.15□□□□□ -0.3
CTDSPL-205ENST00000436654 TECPR2O15040 1411 aa13.14□□□□□ -0.31
CTDSPL-205ENST00000436654 FOXO3O43524 673 aa13.14□□□□□ -0.31
CTDSPL-205ENST00000436654 CFAP70Q5T0N1 1121 aa13.14□□□□□ -0.31
CTDSPL-205ENST00000436654 NGLY1Q96IV0 654 aa13.14□□□□□ -0.31
CTDSPL-205ENST00000436654 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
CTDSPL-205ENST00000436654 CDK12Q9NYV4 1490 aaPredicted RBP13.13□□□□□ -0.31
CTDSPL-205ENST00000436654 C14orf93Q9H972 538 aaKnown RBP13.13□□□□□ -0.31
CTDSPL-205ENST00000436654 QTRT2Q9H974 415 aaKnown RBP13.13□□□□□ -0.31
CTDSPL-205ENST00000436654 SRCAPQ6ZRS2 3230 aa13.13□□□□□ -0.31
CTDSPL-205ENST00000436654 NPHP3Q7Z494 1330 aa13.13□□□□□ -0.31
CTDSPL-205ENST00000436654 CDC42BPGQ6DT37 1551 aa13.12□□□□□ -0.31
CTDSPL-205ENST00000436654 SAFB2Q14151 953 aaKnown RBP eCLIP13.11□□□□□ -0.31
CTDSPL-205ENST00000436654 DHX57Q6P158 1386 aaKnown RBP13.1□□□□□ -0.31
CTDSPL-205ENST00000436654 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
CTDSPL-205ENST00000436654 MYOM2P54296 1465 aa13.1□□□□□ -0.31
CTDSPL-205ENST00000436654 NRXN1Q9ULB1 1477 aa13.1□□□□□ -0.31
CTDSPL-205ENST00000436654 LAMC1P11047 1609 aa13.1□□□□□ -0.31
CTDSPL-205ENST00000436654 RBM6P78332 1123 aaKnown RBP13.09□□□□□ -0.31
CTDSPL-205ENST00000436654 PRAM1Q96QH2 718 aa13.09□□□□□ -0.31
CTDSPL-205ENST00000436654 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
CTDSPL-205ENST00000436654 PXDNQ92626 1479 aa13.09□□□□□ -0.31
CTDSPL-205ENST00000436654 SIRT1Q96EB6 747 aa13.08□□□□□ -0.32
CTDSPL-205ENST00000436654 USP21Q9UK80 565 aa13.08□□□□□ -0.32
CTDSPL-205ENST00000436654 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
CTDSPL-205ENST00000436654 POGKQ9P215 609 aa13.07□□□□□ -0.32
CTDSPL-205ENST00000436654 RGS12O14924 1447 aa13.06□□□□□ -0.32
CTDSPL-205ENST00000436654 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
CTDSPL-205ENST00000436654 PLEKHG5O94827 1062 aa13.05□□□□□ -0.32
CTDSPL-205ENST00000436654 FNBP4Q8N3X1 1017 aaPredicted RBP13.05□□□□□ -0.32
CTDSPL-205ENST00000436654 PHF8Q9UPP1 1060 aa13.05□□□□□ -0.32
CTDSPL-205ENST00000436654 TRAK1Q9UPV9 953 aa13.05□□□□□ -0.32
CTDSPL-205ENST00000436654 KNDC1Q76NI1 1749 aa13.05□□□□□ -0.32
CTDSPL-205ENST00000436654 HIRIP3Q9BW71 556 aaPredicted RBP13.04□□□□□ -0.32
CTDSPL-205ENST00000436654 TRPC5Q9UL62 973 aaPredicted RBP13.04□□□□□ -0.32
CTDSPL-205ENST00000436654 SPATA31A3Q5VYP0 1347 aa13.04□□□□□ -0.32
CTDSPL-205ENST00000436654 COL22A1Q8NFW1 1626 aaPredicted RBP13.02□□□□□ -0.32
CTDSPL-205ENST00000436654 HRCP23327 699 aa13.02□□□□□ -0.33
CTDSPL-205ENST00000436654 PMFBP1Q8TBY8 1022 aa13.02□□□□□ -0.33
CTDSPL-205ENST00000436654 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
CTDSPL-205ENST00000436654 FMN2Q9NZ56 1722 aa13.02□□□□□ -0.33
CTDSPL-205ENST00000436654 PSME1Q06323 249 aa13.01□□□□□ -0.33
CTDSPL-205ENST00000436654 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
CTDSPL-205ENST00000436654 CABLES1Q8TDN4 633 aa13.01□□□□□ -0.33
CTDSPL-205ENST00000436654 ATRNO75882 1429 aa13.01□□□□□ -0.33
CTDSPL-205ENST00000436654 ADGRB1O14514 1584 aa13.01□□□□□ -0.33
CTDSPL-205ENST00000436654 DLC1Q96QB1 1528 aa13□□□□□ -0.33
CTDSPL-205ENST00000436654 BCL9LQ86UU0 1499 aa13□□□□□ -0.33
CTDSPL-205ENST00000436654 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
CTDSPL-205ENST00000436654 TNS3Q68CZ2 1445 aa12.99□□□□□ -0.33
CTDSPL-205ENST00000436654 KIF1AQ12756 1690 aa12.99□□□□□ -0.33
CTDSPL-205ENST00000436654 ANKARQ7Z5J8 1434 aa12.97□□□□□ -0.33
CTDSPL-205ENST00000436654 ATAD2Q6PL18 1390 aa12.97□□□□□ -0.33
CTDSPL-205ENST00000436654 PRR36Q9H6K5 1346 aa12.97□□□□□ -0.33
CTDSPL-205ENST00000436654 UNC5CLQ8IV45 518 aa12.97□□□□□ -0.33
CTDSPL-205ENST00000436654 GJD4Q96KN9 370 aaPredicted RBP12.97□□□□□ -0.33
CTDSPL-205ENST00000436654 STAC3Q96MF2 364 aa12.97□□□□□ -0.33
CTDSPL-205ENST00000436654 SBNO1A3KN83 1393 aa12.96□□□□□ -0.33
CTDSPL-205ENST00000436654 WASLO00401 505 aaPredicted RBP12.96□□□□□ -0.33
CTDSPL-205ENST00000436654 ZRANB1Q9UGI0 708 aa12.95□□□□□ -0.34
CTDSPL-205ENST00000436654 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
CTDSPL-205ENST00000436654 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
CTDSPL-205ENST00000436654 SLIT2O94813 1529 aa12.94□□□□□ -0.34
CTDSPL-205ENST00000436654 NGDNQ8NEJ9 315 aaKnown RBP12.94□□□□□ -0.34
CTDSPL-205ENST00000436654 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
CTDSPL-205ENST00000436654 GPRASP1Q5JY77 1395 aa12.94□□□□□ -0.34
CTDSPL-205ENST00000436654 RALGAPBQ86X10 1494 aa12.93□□□□□ -0.34
CTDSPL-205ENST00000436654 USP32Q8NFA0 1604 aa12.93□□□□□ -0.34
CTDSPL-205ENST00000436654 CCDC9Q9Y3X0 531 aaKnown RBP12.93□□□□□ -0.34
CTDSPL-205ENST00000436654 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
CTDSPL-205ENST00000436654 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
CTDSPL-205ENST00000436654 FAM83GA6ND36 823 aa12.91□□□□□ -0.34
CTDSPL-205ENST00000436654 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
CTDSPL-205ENST00000436654 NUDT16Q96DE0 195 aaKnown RBP12.91□□□□□ -0.34
CTDSPL-205ENST00000436654 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
CTDSPL-205ENST00000436654 VPS72Q15906 364 aa12.9□□□□□ -0.34
CTDSPL-205ENST00000436654 CDK19Q9BWU1 502 aa12.9□□□□□ -0.34
CTDSPL-205ENST00000436654 SEPT12Q8IYM1 358 aa12.89□□□□□ -0.35
CTDSPL-205ENST00000436654 GLI3P10071 1580 aa12.89□□□□□ -0.35
CTDSPL-205ENST00000436654 MARF1Q9Y4F3 1742 aaKnown RBP12.88□□□□□ -0.35
CTDSPL-205ENST00000436654 BTG4Q9NY30 223 aa12.88□□□□□ -0.35
CTDSPL-205ENST00000436654 ATP7BP35670 1465 aa12.88□□□□□ -0.35
CTDSPL-205ENST00000436654 NUTM2GQ5VZR2 741 aa12.87□□□□□ -0.35
CTDSPL-205ENST00000436654 A0A0G2JS52 829 aa12.86□□□□□ -0.35
CTDSPL-205ENST00000436654 MYT1Q01538 1121 aa12.86□□□□□ -0.35
CTDSPL-205ENST00000436654 ARHGEF28Q8N1W1 1705 aaKnown RBP12.85□□□□□ -0.35
CTDSPL-205ENST00000436654 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.85□□□□□ -0.35
CTDSPL-205ENST00000436654 TRPM3Q9HCF6 1732 aaPredicted RBP12.85□□□□□ -0.35
CTDSPL-205ENST00000436654 FAM98CQ17RN3 349 aaKnown RBP12.85□□□□□ -0.35
CTDSPL-205ENST00000436654 CCDC125Q86Z20 511 aa12.85□□□□□ -0.35
CTDSPL-205ENST00000436654 L3MBTL2Q969R5 705 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms