RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 ATF3P18847 181 aa24.87■■□□□ 1.57
CCDC144A-209ENST00000436374 NBPF1Q3BBV0 1214 aa24.87■■□□□ 1.57
CCDC144A-209ENST00000436374 USP47Q96K76 1375 aa24.86■■□□□ 1.57
CCDC144A-209ENST00000436374 ADGRB1O14514 1584 aa24.84■■□□□ 1.57
CCDC144A-209ENST00000436374 NALCNQ8IZF0 1738 aa24.83■■□□□ 1.57
CCDC144A-209ENST00000436374 AHDC1Q5TGY3 1603 aaPredicted RBP24.83■■□□□ 1.57
CCDC144A-209ENST00000436374 DCCP43146 1447 aa24.82■■□□□ 1.56
CCDC144A-209ENST00000436374 LRPPRCP42704 1394 aaKnown RBP24.81■■□□□ 1.56
CCDC144A-209ENST00000436374 YTHDC2Q9H6S0 1430 aaKnown RBP24.81■■□□□ 1.56
CCDC144A-209ENST00000436374 SIRT1Q96EB6 747 aa24.81■■□□□ 1.56
CCDC144A-209ENST00000436374 ABCC11Q96J66 1382 aa24.8■■□□□ 1.56
CCDC144A-209ENST00000436374 JCADQ9P266 1359 aa24.8■■□□□ 1.56
CCDC144A-209ENST00000436374 MST1RQ04912 1400 aa24.8■■□□□ 1.56
CCDC144A-209ENST00000436374 BRINP3Q76B58 766 aa24.8■■□□□ 1.56
CCDC144A-209ENST00000436374 ADGRL3Q9HAR2 1447 aa24.78■■□□□ 1.56
CCDC144A-209ENST00000436374 TMEM132EQ6IEE7 984 aa24.78■■□□□ 1.56
CCDC144A-209ENST00000436374 HSPA5P11021 654 aaKnown RBP24.77■■□□□ 1.56
CCDC144A-209ENST00000436374 DLC1Q96QB1 1528 aa24.76■■□□□ 1.55
CCDC144A-209ENST00000436374 POTEAQ6S8J7 498 aa24.76■■□□□ 1.55
CCDC144A-209ENST00000436374 ROBO2Q9HCK4 1378 aa24.76■■□□□ 1.55
CCDC144A-209ENST00000436374 TECPR2O15040 1411 aa24.76■■□□□ 1.55
CCDC144A-209ENST00000436374 ASXL1Q8IXJ9 1541 aa24.76■■□□□ 1.55
CCDC144A-209ENST00000436374 PTCH1Q13635 1447 aa24.74■■□□□ 1.55
CCDC144A-209ENST00000436374 LRP6O75581 1613 aa24.74■■□□□ 1.55
CCDC144A-209ENST00000436374 NHSL1Q5SYE7 1610 aa24.74■■□□□ 1.55
CCDC144A-209ENST00000436374 SHPRHQ149N8 1683 aa24.74■■□□□ 1.55
CCDC144A-209ENST00000436374 CENPJQ9HC77 1338 aaPredicted RBP24.73■■□□□ 1.55
CCDC144A-209ENST00000436374 ZNF316A6NFI3 1004 aaPredicted RBP24.73■■□□□ 1.55
CCDC144A-209ENST00000436374 TRAK1Q9UPV9 953 aa24.73■■□□□ 1.55
CCDC144A-209ENST00000436374 SBNO2Q9Y2G9 1366 aa24.72■■□□□ 1.55
CCDC144A-209ENST00000436374 ST20-MTHFSA0A0A6YYL1 179 aa24.72■■□□□ 1.55
CCDC144A-209ENST00000436374 CDCA8Q53HL2 280 aa24.71■■□□□ 1.55
CCDC144A-209ENST00000436374 POGKQ9P215 609 aa24.71■■□□□ 1.55
CCDC144A-209ENST00000436374 STK26Q9P289 416 aa24.71■■□□□ 1.55
CCDC144A-209ENST00000436374 DDX17Q92841 729 aaKnown RBP24.69■■□□□ 1.54
CCDC144A-209ENST00000436374 KNDC1Q76NI1 1749 aa24.68■■□□□ 1.54
CCDC144A-209ENST00000436374 SPATA31A6Q5VVP1 1343 aa24.67■■□□□ 1.54
CCDC144A-209ENST00000436374 TMF1P82094 1093 aa24.67■■□□□ 1.54
CCDC144A-209ENST00000436374 C1orf167Q5SNV9 1468 aa24.66■■□□□ 1.54
CCDC144A-209ENST00000436374 PRAM1Q96QH2 718 aa24.64■■□□□ 1.54
CCDC144A-209ENST00000436374 ARHGEF28Q8N1W1 1705 aaKnown RBP24.61■■□□□ 1.53
CCDC144A-209ENST00000436374 PUS7Q96PZ0 661 aaKnown RBP24.61■■□□□ 1.53
CCDC144A-209ENST00000436374 TESK2Q96S53 571 aa24.61■■□□□ 1.53
CCDC144A-209ENST00000436374 ORAI2Q96SN7 254 aa24.6■■□□□ 1.53
CCDC144A-209ENST00000436374 EVC2Q86UK5 1308 aa24.6■■□□□ 1.53
CCDC144A-209ENST00000436374 NUTM2BA6NNL0 878 aaPredicted RBP24.58■■□□□ 1.53
CCDC144A-209ENST00000436374 NUTM2EB1AL46 878 aaPredicted RBP24.58■■□□□ 1.53
CCDC144A-209ENST00000436374 NUTM2AQ8IVF1 878 aaPredicted RBP24.58■■□□□ 1.53
CCDC144A-209ENST00000436374 MEX3CQ5U5Q3 659 aaKnown RBP24.57■■□□□ 1.52
CCDC144A-209ENST00000436374 WAPLQ7Z5K2 1190 aa24.57■■□□□ 1.52
CCDC144A-209ENST00000436374 PLEKHH1Q9ULM0 1364 aa24.56■■□□□ 1.52
CCDC144A-209ENST00000436374 CDC42BPGQ6DT37 1551 aa24.56■■□□□ 1.52
CCDC144A-209ENST00000436374 LRRC59Q96AG4 307 aaKnown RBP24.56■■□□□ 1.52
CCDC144A-209ENST00000436374 PNPLA6Q8IY17 1366 aa24.55■■□□□ 1.52
CCDC144A-209ENST00000436374 HIRIP3Q9BW71 556 aaPredicted RBP24.55■■□□□ 1.52
CCDC144A-209ENST00000436374 QRICH2Q9H0J4 1663 aa24.53■■□□□ 1.52
CCDC144A-209ENST00000436374 SOS2Q07890 1332 aaPredicted RBP24.52■■□□□ 1.52
CCDC144A-209ENST00000436374 CCDC7Q96M83 1385 aa24.51■■□□□ 1.51
CCDC144A-209ENST00000436374 SAFB2Q14151 953 aaKnown RBP eCLIP24.5■■□□□ 1.51
CCDC144A-209ENST00000436374 ZNF772Q68DY9 489 aaPredicted RBP24.49■■□□□ 1.51
CCDC144A-209ENST00000436374 MINK1Q8N4C8 1332 aaPredicted RBP24.49■■□□□ 1.51
CCDC144A-209ENST00000436374 ADGRB2O60241 1585 aa24.48■■□□□ 1.51
CCDC144A-209ENST00000436374 KIF7Q2M1P5 1343 aa24.48■■□□□ 1.51
CCDC144A-209ENST00000436374 ATAD2Q6PL18 1390 aa24.47■■□□□ 1.51
CCDC144A-209ENST00000436374 NINLQ9Y2I6 1382 aa24.47■■□□□ 1.51
CCDC144A-209ENST00000436374 WASLO00401 505 aaPredicted RBP24.47■■□□□ 1.51
CCDC144A-209ENST00000436374 FMN2Q9NZ56 1722 aa24.47■■□□□ 1.51
CCDC144A-209ENST00000436374 AFF2P51816 1311 aa24.46■■□□□ 1.51
CCDC144A-209ENST00000436374 WASHC2AQ641Q2 1341 aa24.46■■□□□ 1.51
CCDC144A-209ENST00000436374 NUTM2FA1L443 756 aa24.46■■□□□ 1.51
CCDC144A-209ENST00000436374 ESCO1Q5FWF5 840 aa24.46■■□□□ 1.51
CCDC144A-209ENST00000436374 SRPK2P78362 688 aaKnown RBP24.45■■□□□ 1.5
CCDC144A-209ENST00000436374 RGPD8O14715 1765 aaPredicted RBP24.44■■□□□ 1.5
CCDC144A-209ENST00000436374 PXDNQ92626 1479 aa24.44■■□□□ 1.5
CCDC144A-209ENST00000436374 CDK19Q9BWU1 502 aa24.43■■□□□ 1.5
CCDC144A-209ENST00000436374 C8orf37Q96NL8 207 aa24.42■■□□□ 1.5
CCDC144A-209ENST00000436374 COL22A1Q8NFW1 1626 aaPredicted RBP24.42■■□□□ 1.5
CCDC144A-209ENST00000436374 TULP4Q9NRJ4 1543 aa24.4■■□□□ 1.5
CCDC144A-209ENST00000436374 C11orf95C9JLR9 678 aaPredicted RBP24.4■■□□□ 1.5
CCDC144A-209ENST00000436374 FOXO3O43524 673 aa24.4■■□□□ 1.5
CCDC144A-209ENST00000436374 ADAMTS2O95450 1211 aa24.4■■□□□ 1.5
CCDC144A-209ENST00000436374 XPCQ01831 940 aaPredicted RBP24.4■■□□□ 1.5
CCDC144A-209ENST00000436374 POLR3GLQ9BT43 218 aa24.4■■□□□ 1.5
CCDC144A-209ENST00000436374 NPHP3Q7Z494 1330 aa24.39■■□□□ 1.5
CCDC144A-209ENST00000436374 ANKARQ7Z5J8 1434 aa24.38■■□□□ 1.49
CCDC144A-209ENST00000436374 RXRBP28702 533 aa24.38■■□□□ 1.49
CCDC144A-209ENST00000436374 KIF1AQ12756 1690 aa24.35■■□□□ 1.49
CCDC144A-209ENST00000436374 CABP2Q9NPB3 220 aa24.35■■□□□ 1.49
CCDC144A-209ENST00000436374 CCDC61Q9Y6R9 512 aa24.35■■□□□ 1.49
CCDC144A-209ENST00000436374 NUDT16Q96DE0 195 aaKnown RBP24.33■■□□□ 1.49
CCDC144A-209ENST00000436374 NGLY1Q96IV0 654 aa24.33■■□□□ 1.49
CCDC144A-209ENST00000436374 QTRT2Q9H974 415 aaKnown RBP24.33■■□□□ 1.49
CCDC144A-209ENST00000436374 MARF1Q9Y4F3 1742 aaKnown RBP24.32■■□□□ 1.48
CCDC144A-209ENST00000436374 CDK12Q9NYV4 1490 aaPredicted RBP24.32■■□□□ 1.48
CCDC144A-209ENST00000436374 TERF2IPQ9NYB0 399 aa24.32■■□□□ 1.48
CCDC144A-209ENST00000436374 USP32Q8NFA0 1604 aa24.32■■□□□ 1.48
CCDC144A-209ENST00000436374 DDX10Q13206 875 aaKnown RBP24.31■■□□□ 1.48
CCDC144A-209ENST00000436374 TMC1Q8TDI8 760 aa24.31■■□□□ 1.48
CCDC144A-209ENST00000436374 HDGFL2Q7Z4V5 671 aaPredicted RBP24.29■■□□□ 1.48
CCDC144A-209ENST00000436374 SPATA31A3Q5VYP0 1347 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms