RNA–Protein interactions for RNA: ENST00000436040.6

APTX-208, Transcript of aprataxin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APTX, Length 2,168 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-208ENST00000436040 ARHGEF28Q8N1W1 1705 aaKnown RBP16.45■□□□□ 0.22
APTX-208ENST00000436040 ILDR1Q86SU0 546 aaPredicted RBP16.44■□□□□ 0.22
APTX-208ENST00000436040 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
APTX-208ENST00000436040 PLEKHH1Q9ULM0 1364 aa16.43■□□□□ 0.22
APTX-208ENST00000436040 CADPS2Q86UW7 1296 aa16.43■□□□□ 0.22
APTX-208ENST00000436040 CDC42BPGQ6DT37 1551 aa16.42■□□□□ 0.22
APTX-208ENST00000436040 NBPF1Q3BBV0 1214 aa16.42■□□□□ 0.22
APTX-208ENST00000436040 ATF3P18847 181 aa16.41■□□□□ 0.22
APTX-208ENST00000436040 WAPLQ7Z5K2 1190 aa16.41■□□□□ 0.22
APTX-208ENST00000436040 TRAK1Q9UPV9 953 aa16.41■□□□□ 0.22
APTX-208ENST00000436040 RALGAPBQ86X10 1494 aa16.4■□□□□ 0.22
APTX-208ENST00000436040 PIP4K2BP78356 416 aa16.4■□□□□ 0.22
APTX-208ENST00000436040 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
APTX-208ENST00000436040 PRAM1Q96QH2 718 aa16.4■□□□□ 0.22
APTX-208ENST00000436040 ADGRB2O60241 1585 aa16.39■□□□□ 0.21
APTX-208ENST00000436040 ROBO1Q9Y6N7 1651 aa16.39■□□□□ 0.21
APTX-208ENST00000436040 ROCK2O75116 1388 aaKnown RBP16.39■□□□□ 0.21
APTX-208ENST00000436040 GPRASP1Q5JY77 1395 aa16.39■□□□□ 0.21
APTX-208ENST00000436040 MST1RQ04912 1400 aa16.39■□□□□ 0.21
APTX-208ENST00000436040 SLAIN2Q9P270 581 aa16.38■□□□□ 0.21
APTX-208ENST00000436040 MIER1Q8N108 512 aa16.38■□□□□ 0.21
APTX-208ENST00000436040 POGKQ9P215 609 aa16.37■□□□□ 0.21
APTX-208ENST00000436040 FMN2Q9NZ56 1722 aa16.37■□□□□ 0.21
APTX-208ENST00000436040 SAFB2Q14151 953 aaKnown RBP eCLIP16.34■□□□□ 0.21
APTX-208ENST00000436040 C1orf167Q5SNV9 1468 aa16.34■□□□□ 0.21
APTX-208ENST00000436040 QRICH2Q9H0J4 1663 aa16.34■□□□□ 0.21
APTX-208ENST00000436040 EIF3AQ14152 1382 aaKnown RBP16.31■□□□□ 0.2
APTX-208ENST00000436040 CENPJQ9HC77 1338 aaPredicted RBP16.31■□□□□ 0.2
APTX-208ENST00000436040 CARD11Q9BXL7 1154 aa16.3■□□□□ 0.2
APTX-208ENST00000436040 MINK1Q8N4C8 1332 aaPredicted RBP16.3■□□□□ 0.2
APTX-208ENST00000436040 NHSL1Q5SYE7 1610 aa16.3■□□□□ 0.2
APTX-208ENST00000436040 AHDC1Q5TGY3 1603 aaPredicted RBP16.3■□□□□ 0.2
APTX-208ENST00000436040 BRINP3Q76B58 766 aa16.3■□□□□ 0.2
APTX-208ENST00000436040 PHLPP1O60346 1717 aa16.3■□□□□ 0.2
APTX-208ENST00000436040 RGPD8O14715 1765 aaPredicted RBP16.29■□□□□ 0.2
APTX-208ENST00000436040 HSPA1LP34931 641 aa16.28■□□□□ 0.2
APTX-208ENST00000436040 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
APTX-208ENST00000436040 ANKARQ7Z5J8 1434 aa16.28■□□□□ 0.2
APTX-208ENST00000436040 HIRIP3Q9BW71 556 aaPredicted RBP16.28■□□□□ 0.2
APTX-208ENST00000436040 TULP4Q9NRJ4 1543 aa16.28■□□□□ 0.2
APTX-208ENST00000436040 KIF1AQ12756 1690 aa16.27■□□□□ 0.2
APTX-208ENST00000436040 WASLO00401 505 aaPredicted RBP16.27■□□□□ 0.19
APTX-208ENST00000436040 COL16A1Q07092 1604 aaPredicted RBP16.26■□□□□ 0.19
APTX-208ENST00000436040 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
APTX-208ENST00000436040 ORAI2Q96SN7 254 aa16.24■□□□□ 0.19
APTX-208ENST00000436040 SBNO2Q9Y2G9 1366 aa16.24■□□□□ 0.19
APTX-208ENST00000436040 NUTM2FA1L443 756 aa16.24■□□□□ 0.19
APTX-208ENST00000436040 ESCO1Q5FWF5 840 aa16.23■□□□□ 0.19
APTX-208ENST00000436040 ATP7BP35670 1465 aa16.23■□□□□ 0.19
APTX-208ENST00000436040 TOPAZ1Q8N9V7 1692 aa16.22■□□□□ 0.19
APTX-208ENST00000436040 CDK19Q9BWU1 502 aa16.21■□□□□ 0.19
APTX-208ENST00000436040 PRR36Q9H6K5 1346 aa16.21■□□□□ 0.19
APTX-208ENST00000436040 USP47Q96K76 1375 aa16.2■□□□□ 0.18
APTX-208ENST00000436040 EVC2Q86UK5 1308 aa16.19■□□□□ 0.18
APTX-208ENST00000436040 NPHP3Q7Z494 1330 aa16.19■□□□□ 0.18
APTX-208ENST00000436040 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
APTX-208ENST00000436040 SHPRHQ149N8 1683 aa16.18■□□□□ 0.18
APTX-208ENST00000436040 PXDNQ92626 1479 aa16.18■□□□□ 0.18
APTX-208ENST00000436040 NUDT16Q96DE0 195 aaKnown RBP16.18■□□□□ 0.18
APTX-208ENST00000436040 ST20-MTHFSA0A0A6YYL1 179 aa16.17■□□□□ 0.18
APTX-208ENST00000436040 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
APTX-208ENST00000436040 SOS2Q07890 1332 aaPredicted RBP16.17■□□□□ 0.18
APTX-208ENST00000436040 SRPK2P78362 688 aaKnown RBP16.16■□□□□ 0.18
APTX-208ENST00000436040 JCADQ9P266 1359 aa16.16■□□□□ 0.18
APTX-208ENST00000436040 FOXO3O43524 673 aa16.16■□□□□ 0.18
APTX-208ENST00000436040 TESK2Q96S53 571 aa16.15■□□□□ 0.18
APTX-208ENST00000436040 CABP2Q9NPB3 220 aa16.15■□□□□ 0.18
APTX-208ENST00000436040 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
APTX-208ENST00000436040 SLC24A1O60721 1099 aa16.14■□□□□ 0.17
APTX-208ENST00000436040 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
APTX-208ENST00000436040 LRRC59Q96AG4 307 aaKnown RBP16.14■□□□□ 0.17
APTX-208ENST00000436040 PMFBP1Q8TBY8 1022 aa16.13■□□□□ 0.17
APTX-208ENST00000436040 SUPT16HQ9Y5B9 1047 aaKnown RBP16.13■□□□□ 0.17
APTX-208ENST00000436040 PPIP5K1Q6PFW1 1433 aa16.13■□□□□ 0.17
APTX-208ENST00000436040 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
APTX-208ENST00000436040 TRPM3Q9HCF6 1732 aaPredicted RBP16.13■□□□□ 0.17
APTX-208ENST00000436040 POLR3AO14802 1390 aaPredicted RBP16.12■□□□□ 0.17
APTX-208ENST00000436040 PLEKHG3A1L390 1219 aa16.12■□□□□ 0.17
APTX-208ENST00000436040 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
APTX-208ENST00000436040 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
APTX-208ENST00000436040 PUS7Q96PZ0 661 aaKnown RBP16.11■□□□□ 0.17
APTX-208ENST00000436040 PNPLA6Q8IY17 1366 aa16.11■□□□□ 0.17
APTX-208ENST00000436040 XPCQ01831 940 aaPredicted RBP16.1■□□□□ 0.17
APTX-208ENST00000436040 PSME1Q06323 249 aa16.1■□□□□ 0.17
APTX-208ENST00000436040 SBNO1A3KN83 1393 aa16.1■□□□□ 0.17
APTX-208ENST00000436040 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
APTX-208ENST00000436040 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
APTX-208ENST00000436040 MED1Q15648 1581 aaPredicted RBP16.1■□□□□ 0.17
APTX-208ENST00000436040 SPATA31A6Q5VVP1 1343 aa16.09■□□□□ 0.17
APTX-208ENST00000436040 AKAP12Q02952 1782 aa16.09■□□□□ 0.17
APTX-208ENST00000436040 TNS3Q68CZ2 1445 aa16.09■□□□□ 0.17
APTX-208ENST00000436040 ALS2Q96Q42 1657 aa16.09■□□□□ 0.17
APTX-208ENST00000436040 ACEP12821 1306 aa16.08■□□□□ 0.17
APTX-208ENST00000436040 TMF1P82094 1093 aa16.08■□□□□ 0.16
APTX-208ENST00000436040 SPATA31A3Q5VYP0 1347 aa16.08■□□□□ 0.16
APTX-208ENST00000436040 C11orf95C9JLR9 678 aaPredicted RBP16.07■□□□□ 0.16
APTX-208ENST00000436040 DISP3Q9P2K9 1392 aa16.07■□□□□ 0.16
APTX-208ENST00000436040 CABP1Q9NZU7 370 aa16.07■□□□□ 0.16
APTX-208ENST00000436040 ARHGEF10O15013 1369 aa16.05■□□□□ 0.16
APTX-208ENST00000436040 BRD4O60885 1362 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms