RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 ORAI2Q96SN7 254 aa16.48■□□□□ 0.23
SPTLC1P4-201ENST00000435997 ADGRF5Q8IZF2 1346 aa16.47■□□□□ 0.23
SPTLC1P4-201ENST00000435997 ANKRD30BQ9BXX2 1392 aa16.47■□□□□ 0.23
SPTLC1P4-201ENST00000435997 COL22A1Q8NFW1 1626 aaPredicted RBP16.46■□□□□ 0.23
SPTLC1P4-201ENST00000435997 LRPPRCP42704 1394 aaKnown RBP16.46■□□□□ 0.23
SPTLC1P4-201ENST00000435997 IFT172Q9UG01 1749 aa16.45■□□□□ 0.22
SPTLC1P4-201ENST00000435997 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
SPTLC1P4-201ENST00000435997 MYOM2P54296 1465 aa16.45■□□□□ 0.22
SPTLC1P4-201ENST00000435997 PXDNQ92626 1479 aa16.45■□□□□ 0.22
SPTLC1P4-201ENST00000435997 ABCC11Q96J66 1382 aa16.44■□□□□ 0.22
SPTLC1P4-201ENST00000435997 KNDC1Q76NI1 1749 aa16.43■□□□□ 0.22
SPTLC1P4-201ENST00000435997 NRXN1Q9ULB1 1477 aa16.42■□□□□ 0.22
SPTLC1P4-201ENST00000435997 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
SPTLC1P4-201ENST00000435997 MPHOSPH9Q99550 1183 aa16.42■□□□□ 0.22
SPTLC1P4-201ENST00000435997 NPHP3Q7Z494 1330 aa16.42■□□□□ 0.22
SPTLC1P4-201ENST00000435997 PLEKHH1Q9ULM0 1364 aa16.41■□□□□ 0.22
SPTLC1P4-201ENST00000435997 FNBP4Q8N3X1 1017 aaPredicted RBP16.41■□□□□ 0.22
SPTLC1P4-201ENST00000435997 ADAMTS2O95450 1211 aa16.4■□□□□ 0.22
SPTLC1P4-201ENST00000435997 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
SPTLC1P4-201ENST00000435997 ATRNO75882 1429 aa16.39■□□□□ 0.21
SPTLC1P4-201ENST00000435997 YTHDC2Q9H6S0 1430 aaKnown RBP16.39■□□□□ 0.21
SPTLC1P4-201ENST00000435997 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
SPTLC1P4-201ENST00000435997 ESCO1Q5FWF5 840 aa16.37■□□□□ 0.21
SPTLC1P4-201ENST00000435997 WAPLQ7Z5K2 1190 aa16.37■□□□□ 0.21
SPTLC1P4-201ENST00000435997 NGLY1Q96IV0 654 aa16.37■□□□□ 0.21
SPTLC1P4-201ENST00000435997 BCL9LQ86UU0 1499 aa16.35■□□□□ 0.21
SPTLC1P4-201ENST00000435997 TMEM132EQ6IEE7 984 aa16.35■□□□□ 0.21
SPTLC1P4-201ENST00000435997 SIRT1Q96EB6 747 aa16.35■□□□□ 0.21
SPTLC1P4-201ENST00000435997 USP21Q9UK80 565 aa16.35■□□□□ 0.21
SPTLC1P4-201ENST00000435997 FMN2Q9NZ56 1722 aa16.35■□□□□ 0.21
SPTLC1P4-201ENST00000435997 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
SPTLC1P4-201ENST00000435997 FOXO3O43524 673 aa16.34■□□□□ 0.21
SPTLC1P4-201ENST00000435997 C14orf93Q9H972 538 aaKnown RBP16.34■□□□□ 0.21
SPTLC1P4-201ENST00000435997 STK26Q9P289 416 aa16.34■□□□□ 0.21
SPTLC1P4-201ENST00000435997 TRPC5Q9UL62 973 aaPredicted RBP16.34■□□□□ 0.21
SPTLC1P4-201ENST00000435997 KIF1AQ12756 1690 aa16.33■□□□□ 0.2
SPTLC1P4-201ENST00000435997 XPCQ01831 940 aaPredicted RBP16.32■□□□□ 0.2
SPTLC1P4-201ENST00000435997 DLC1Q96QB1 1528 aa16.31■□□□□ 0.2
SPTLC1P4-201ENST00000435997 ATAD2Q6PL18 1390 aa16.31■□□□□ 0.2
SPTLC1P4-201ENST00000435997 SPATA31A3Q5VYP0 1347 aa16.31■□□□□ 0.2
SPTLC1P4-201ENST00000435997 SLIT2O94813 1529 aa16.3■□□□□ 0.2
SPTLC1P4-201ENST00000435997 ADGRB1O14514 1584 aa16.3■□□□□ 0.2
SPTLC1P4-201ENST00000435997 NUTM2FA1L443 756 aa16.29■□□□□ 0.2
SPTLC1P4-201ENST00000435997 ADGRB2O60241 1585 aa16.29■□□□□ 0.2
SPTLC1P4-201ENST00000435997 TNS3Q68CZ2 1445 aa16.28■□□□□ 0.2
SPTLC1P4-201ENST00000435997 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.28■□□□□ 0.2
SPTLC1P4-201ENST00000435997 MARF1Q9Y4F3 1742 aaKnown RBP16.28■□□□□ 0.2
SPTLC1P4-201ENST00000435997 RAB3GAP2Q9H2M9 1393 aa16.28■□□□□ 0.2
SPTLC1P4-201ENST00000435997 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
SPTLC1P4-201ENST00000435997 CFAP70Q5T0N1 1121 aa16.28■□□□□ 0.2
SPTLC1P4-201ENST00000435997 DHX57Q6P158 1386 aaKnown RBP16.27■□□□□ 0.2
SPTLC1P4-201ENST00000435997 EP400Q96L91 3159 aa16.27■□□□□ 0.2
SPTLC1P4-201ENST00000435997 ANKARQ7Z5J8 1434 aa16.26■□□□□ 0.19
SPTLC1P4-201ENST00000435997 SRCAPQ6ZRS2 3230 aa16.26■□□□□ 0.19
SPTLC1P4-201ENST00000435997 SBNO1A3KN83 1393 aa16.26■□□□□ 0.19
SPTLC1P4-201ENST00000435997 GLI3P10071 1580 aa16.25■□□□□ 0.19
SPTLC1P4-201ENST00000435997 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
SPTLC1P4-201ENST00000435997 GJD4Q96KN9 370 aaPredicted RBP16.24■□□□□ 0.19
SPTLC1P4-201ENST00000435997 PRAM1Q96QH2 718 aa16.24■□□□□ 0.19
SPTLC1P4-201ENST00000435997 KRT28Q7Z3Y7 464 aa16.23■□□□□ 0.19
SPTLC1P4-201ENST00000435997 UNC5CLQ8IV45 518 aa16.23■□□□□ 0.19
SPTLC1P4-201ENST00000435997 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
SPTLC1P4-201ENST00000435997 ABCA3Q99758 1704 aa16.21■□□□□ 0.19
SPTLC1P4-201ENST00000435997 ARHGEF10O15013 1369 aa16.21■□□□□ 0.19
SPTLC1P4-201ENST00000435997 ADRA2BP18089 450 aa16.2■□□□□ 0.18
SPTLC1P4-201ENST00000435997 PSME1Q06323 249 aa16.18■□□□□ 0.18
SPTLC1P4-201ENST00000435997 SAFB2Q14151 953 aaKnown RBP eCLIP16.18■□□□□ 0.18
SPTLC1P4-201ENST00000435997 TULP4Q9NRJ4 1543 aa16.18■□□□□ 0.18
SPTLC1P4-201ENST00000435997 TRPM3Q9HCF6 1732 aaPredicted RBP16.17■□□□□ 0.18
SPTLC1P4-201ENST00000435997 EIF3AQ14152 1382 aaKnown RBP16.17■□□□□ 0.18
SPTLC1P4-201ENST00000435997 CCDC125Q86Z20 511 aa16.17■□□□□ 0.18
SPTLC1P4-201ENST00000435997 RGPD8O14715 1765 aaPredicted RBP16.17■□□□□ 0.18
SPTLC1P4-201ENST00000435997 PRR36Q9H6K5 1346 aa16.17■□□□□ 0.18
SPTLC1P4-201ENST00000435997 NWD2Q9ULI1 1742 aa16.16■□□□□ 0.18
SPTLC1P4-201ENST00000435997 PLCH1Q4KWH8 1693 aa16.16■□□□□ 0.18
SPTLC1P4-201ENST00000435997 VPS72Q15906 364 aa16.16■□□□□ 0.18
SPTLC1P4-201ENST00000435997 CABLES1Q8TDN4 633 aa16.16■□□□□ 0.18
SPTLC1P4-201ENST00000435997 HRCP23327 699 aa16.15■□□□□ 0.18
SPTLC1P4-201ENST00000435997 BLMP54132 1417 aaPredicted RBP16.15■□□□□ 0.18
SPTLC1P4-201ENST00000435997 STAC3Q96MF2 364 aa16.15■□□□□ 0.18
SPTLC1P4-201ENST00000435997 POGKQ9P215 609 aa16.15■□□□□ 0.18
SPTLC1P4-201ENST00000435997 ALS2Q96Q42 1657 aa16.14■□□□□ 0.18
SPTLC1P4-201ENST00000435997 ONECUT3O60422 494 aaPredicted RBP16.14■□□□□ 0.17
SPTLC1P4-201ENST00000435997 PMFBP1Q8TBY8 1022 aa16.13■□□□□ 0.17
SPTLC1P4-201ENST00000435997 TRAK1Q9UPV9 953 aa16.13■□□□□ 0.17
SPTLC1P4-201ENST00000435997 ATP7BP35670 1465 aa16.13■□□□□ 0.17
SPTLC1P4-201ENST00000435997 NRAPQ86VF7 1730 aa16.13■□□□□ 0.17
SPTLC1P4-201ENST00000435997 WASLO00401 505 aaPredicted RBP16.12■□□□□ 0.17
SPTLC1P4-201ENST00000435997 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
SPTLC1P4-201ENST00000435997 DCAF11Q8TEB1 546 aa16.11■□□□□ 0.17
SPTLC1P4-201ENST00000435997 CRYBG1Q9Y4K1 1723 aa16.11■□□□□ 0.17
SPTLC1P4-201ENST00000435997 FAM83GA6ND36 823 aa16.1■□□□□ 0.17
SPTLC1P4-201ENST00000435997 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
SPTLC1P4-201ENST00000435997 SEPT12Q8IYM1 358 aa16.1■□□□□ 0.17
SPTLC1P4-201ENST00000435997 MINK1Q8N4C8 1332 aaPredicted RBP16.1■□□□□ 0.17
SPTLC1P4-201ENST00000435997 ARHGEF28Q8N1W1 1705 aaKnown RBP16.1■□□□□ 0.17
SPTLC1P4-201ENST00000435997 GPRASP1Q5JY77 1395 aa16.1■□□□□ 0.17
SPTLC1P4-201ENST00000435997 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
SPTLC1P4-201ENST00000435997 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.16
SPTLC1P4-201ENST00000435997 KDM2AQ9Y2K7 1162 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms