RNA–Protein interactions for RNA: ENST00000435954.2

CLNS1AP1-201, Transcript of chloride nucleotide-sensitive channel 1A pseudogene 1, humanhuman

BASIC

Gene CLNS1AP1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP1-201ENST00000435954 KDM5CP41229 1560 aa11.38□□□□□ -0.59
CLNS1AP1-201ENST00000435954 GPR37O15354 613 aa11.38□□□□□ -0.59
CLNS1AP1-201ENST00000435954 ST18O60284 1047 aa11.38□□□□□ -0.59
CLNS1AP1-201ENST00000435954 EFCAB2Q5VUJ9 269 aa11.38□□□□□ -0.59
CLNS1AP1-201ENST00000435954 FBXW7Q969H0 707 aa11.38□□□□□ -0.59
CLNS1AP1-201ENST00000435954 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
CLNS1AP1-201ENST00000435954 TCOF1Q13428 1488 aaKnown RBP11.37□□□□□ -0.59
CLNS1AP1-201ENST00000435954 PRXQ9BXM0 1461 aa11.37□□□□□ -0.59
CLNS1AP1-201ENST00000435954 DIP2CQ9Y2E4 1556 aa11.37□□□□□ -0.59
CLNS1AP1-201ENST00000435954 ZNF142P52746 1687 aaPredicted RBP11.36□□□□□ -0.59
CLNS1AP1-201ENST00000435954 SUPT6HQ7KZ85 1726 aaKnown RBP11.36□□□□□ -0.59
CLNS1AP1-201ENST00000435954 MAP3K7O43318 606 aa11.36□□□□□ -0.59
CLNS1AP1-201ENST00000435954 MROH2AA6NES4 1674 aa11.36□□□□□ -0.59
CLNS1AP1-201ENST00000435954 BARGINQ6ZT62 677 aa11.35□□□□□ -0.59
CLNS1AP1-201ENST00000435954 CDHR5Q9HBB8 845 aa11.35□□□□□ -0.59
CLNS1AP1-201ENST00000435954 MYO5CQ9NQX4 1742 aa11.35□□□□□ -0.59
CLNS1AP1-201ENST00000435954 PSDA5PKW4 1024 aaPredicted RBP11.34□□□□□ -0.59
CLNS1AP1-201ENST00000435954 TSR1Q2NL82 804 aaKnown RBP11.34□□□□□ -0.59
CLNS1AP1-201ENST00000435954 ADAM33Q9BZ11 813 aa11.34□□□□□ -0.59
CLNS1AP1-201ENST00000435954 PPP4R3BQ5MIZ7 849 aa11.33□□□□□ -0.6
CLNS1AP1-201ENST00000435954 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
CLNS1AP1-201ENST00000435954 CEP170BQ9Y4F5 1589 aaPredicted RBP11.33□□□□□ -0.6
CLNS1AP1-201ENST00000435954 MLH3Q9UHC1 1453 aa11.32□□□□□ -0.6
CLNS1AP1-201ENST00000435954 MYO3AQ8NEV4 1616 aa11.32□□□□□ -0.6
CLNS1AP1-201ENST00000435954 FCHSD2O94868 740 aa11.32□□□□□ -0.6
CLNS1AP1-201ENST00000435954 PTGDRQ13258 359 aa11.32□□□□□ -0.6
CLNS1AP1-201ENST00000435954 C6orf132Q5T0Z8 1188 aa11.32□□□□□ -0.6
CLNS1AP1-201ENST00000435954 NPDC1Q9NQX5 325 aaPredicted RBP11.32□□□□□ -0.6
CLNS1AP1-201ENST00000435954 SLC24A3Q9HC58 644 aa11.31□□□□□ -0.6
CLNS1AP1-201ENST00000435954 ABCA6Q8N139 1617 aa11.31□□□□□ -0.6
CLNS1AP1-201ENST00000435954 SHANK2Q9UPX8 1470 aa11.3□□□□□ -0.6
CLNS1AP1-201ENST00000435954 ARHGAP5Q13017 1502 aa11.3□□□□□ -0.6
CLNS1AP1-201ENST00000435954 ZMYM3Q14202 1370 aa11.29□□□□□ -0.6
CLNS1AP1-201ENST00000435954 HIC1Q14526 733 aa11.29□□□□□ -0.6
CLNS1AP1-201ENST00000435954 AFAP1Q8N556 730 aa11.29□□□□□ -0.6
CLNS1AP1-201ENST00000435954 GNPATO15228 680 aa11.28□□□□□ -0.6
CLNS1AP1-201ENST00000435954 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
CLNS1AP1-201ENST00000435954 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
CLNS1AP1-201ENST00000435954 CDK11AQ9UQ88 783 aaPredicted RBP11.28□□□□□ -0.6
CLNS1AP1-201ENST00000435954 ERBB3P21860 1342 aa11.28□□□□□ -0.6
CLNS1AP1-201ENST00000435954 FECHP22830 423 aa11.27□□□□□ -0.61
CLNS1AP1-201ENST00000435954 EMP3P54852 163 aa11.27□□□□□ -0.61
CLNS1AP1-201ENST00000435954 KRI1Q8N9T8 703 aaKnown RBP11.27□□□□□ -0.61
CLNS1AP1-201ENST00000435954 KIF14Q15058 1648 aa11.27□□□□□ -0.61
CLNS1AP1-201ENST00000435954 VARS2Q5ST30 1063 aaKnown RBP11.26□□□□□ -0.61
CLNS1AP1-201ENST00000435954 LCE2DQ5TA82 110 aaPredicted RBP11.26□□□□□ -0.61
CLNS1AP1-201ENST00000435954 POLR1AO95602 1720 aaPredicted RBP11.26□□□□□ -0.61
CLNS1AP1-201ENST00000435954 A2ML1A8K2U0 1454 aa11.25□□□□□ -0.61
CLNS1AP1-201ENST00000435954 RNF17Q9BXT8 1623 aaKnown RBP11.24□□□□□ -0.61
CLNS1AP1-201ENST00000435954 RGS17Q9UGC6 210 aaPredicted RBP11.24□□□□□ -0.61
CLNS1AP1-201ENST00000435954 CLIP1P30622 1438 aa11.24□□□□□ -0.61
CLNS1AP1-201ENST00000435954 CDK13Q14004 1512 aaKnown RBP11.24□□□□□ -0.61
CLNS1AP1-201ENST00000435954 FAM205CA6NFA0 338 aa11.22□□□□□ -0.61
CLNS1AP1-201ENST00000435954 SYNMO15061 1565 aa11.22□□□□□ -0.61
CLNS1AP1-201ENST00000435954 COL9A1P20849 921 aa11.22□□□□□ -0.61
CLNS1AP1-201ENST00000435954 PTPREP23469 700 aa11.22□□□□□ -0.61
CLNS1AP1-201ENST00000435954 MAP2K5Q13163 448 aa11.22□□□□□ -0.61
CLNS1AP1-201ENST00000435954 MINK1Q8N4C8 1332 aaPredicted RBP11.22□□□□□ -0.61
CLNS1AP1-201ENST00000435954 AK7Q96M32 723 aa11.22□□□□□ -0.61
CLNS1AP1-201ENST00000435954 CLTCQ00610 1675 aaKnown RBP11.2□□□□□ -0.62
CLNS1AP1-201ENST00000435954 DNMT1P26358 1616 aaKnown RBP11.2□□□□□ -0.62
CLNS1AP1-201ENST00000435954 ALKQ9UM73 1620 aa11.2□□□□□ -0.62
CLNS1AP1-201ENST00000435954 ABCC1P33527 1531 aa11.2□□□□□ -0.62
CLNS1AP1-201ENST00000435954 KIDINS220Q9ULH0 1771 aa11.2□□□□□ -0.62
CLNS1AP1-201ENST00000435954 NEURL4Q96JN8 1562 aa11.2□□□□□ -0.62
CLNS1AP1-201ENST00000435954 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
CLNS1AP1-201ENST00000435954 PPP1R3GB7ZBB8 358 aa11.19□□□□□ -0.62
CLNS1AP1-201ENST00000435954 IRF6O14896 467 aa11.19□□□□□ -0.62
CLNS1AP1-201ENST00000435954 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
CLNS1AP1-201ENST00000435954 ANKLE2Q86XL3 938 aa11.19□□□□□ -0.62
CLNS1AP1-201ENST00000435954 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
CLNS1AP1-201ENST00000435954 VWDEQ8N2E2 1590 aa11.19□□□□□ -0.62
CLNS1AP1-201ENST00000435954 TROQ12816 1431 aaPredicted RBP11.18□□□□□ -0.62
CLNS1AP1-201ENST00000435954 ITSN2Q9NZM3 1697 aa11.18□□□□□ -0.62
CLNS1AP1-201ENST00000435954 POTEEQ6S8J3 1075 aa11.18□□□□□ -0.62
CLNS1AP1-201ENST00000435954 POTEAQ6S8J7 498 aa11.18□□□□□ -0.62
CLNS1AP1-201ENST00000435954 PADI6Q6TGC4 694 aa11.18□□□□□ -0.62
CLNS1AP1-201ENST00000435954 CCDC102AQ96A19 550 aa11.18□□□□□ -0.62
CLNS1AP1-201ENST00000435954 PRSS12P56730 875 aa11.17□□□□□ -0.62
CLNS1AP1-201ENST00000435954 ZNF687Q8N1G0 1237 aa11.17□□□□□ -0.62
CLNS1AP1-201ENST00000435954 CDCA7LQ96GN5 454 aa11.17□□□□□ -0.62
CLNS1AP1-201ENST00000435954 HS3ST6Q96QI5 342 aa11.17□□□□□ -0.62
CLNS1AP1-201ENST00000435954 RBM27Q9P2N5 1060 aaKnown RBP11.17□□□□□ -0.62
CLNS1AP1-201ENST00000435954 SETD1AO15047 1707 aaKnown RBP11.16□□□□□ -0.62
CLNS1AP1-201ENST00000435954 RANGAP1P46060 587 aaPredicted RBP11.16□□□□□ -0.62
CLNS1AP1-201ENST00000435954 PSEN2P49810 448 aa11.16□□□□□ -0.62
CLNS1AP1-201ENST00000435954 TTC13Q8NBP0 860 aa11.16□□□□□ -0.62
CLNS1AP1-201ENST00000435954 NPHP4O75161 1426 aaPredicted RBP11.16□□□□□ -0.62
CLNS1AP1-201ENST00000435954 DEPDC5O75140 1603 aa11.16□□□□□ -0.62
CLNS1AP1-201ENST00000435954 PREX2Q70Z35 1606 aa11.16□□□□□ -0.62
CLNS1AP1-201ENST00000435954 MED14O60244 1454 aa11.15□□□□□ -0.62
CLNS1AP1-201ENST00000435954 ARHGAP33O14559 1287 aa11.15□□□□□ -0.62
CLNS1AP1-201ENST00000435954 TRIM66O15016 1216 aa11.15□□□□□ -0.62
CLNS1AP1-201ENST00000435954 FMN1Q68DA7 1419 aa11.15□□□□□ -0.62
CLNS1AP1-201ENST00000435954 LRRC7Q96NW7 1537 aa11.14□□□□□ -0.63
CLNS1AP1-201ENST00000435954 THEMISQ8N1K5 641 aaPredicted RBP11.14□□□□□ -0.63
CLNS1AP1-201ENST00000435954 AXIN2Q9Y2T1 843 aa11.14□□□□□ -0.63
CLNS1AP1-201ENST00000435954 CDC42BPBQ9Y5S2 1711 aa11.14□□□□□ -0.63
CLNS1AP1-201ENST00000435954 FAM135AQ9P2D6 1515 aa11.14□□□□□ -0.63
CLNS1AP1-201ENST00000435954 PLXNC1O60486 1568 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms