RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 DDX19BQ9UMR2 479 aa19.28■□□□□ 0.68
NEDD4-202ENST00000435532 KIF16BQ96L93 1317 aa19.28■□□□□ 0.68
NEDD4-202ENST00000435532 MFAP1P55081 439 aaKnown RBP19.27■□□□□ 0.68
NEDD4-202ENST00000435532 RILPL2Q969X0 211 aa19.27■□□□□ 0.67
NEDD4-202ENST00000435532 DIAPH3Q9NSV4 1193 aa19.27■□□□□ 0.67
NEDD4-202ENST00000435532 TPM4P67936 248 aa19.26■□□□□ 0.67
NEDD4-202ENST00000435532 ATAD2Q6PL18 1390 aa19.26■□□□□ 0.67
NEDD4-202ENST00000435532 NOP58Q9Y2X3 529 aaKnown RBP19.25■□□□□ 0.67
NEDD4-202ENST00000435532 PNISRQ8TF01 805 aaKnown RBP19.25■□□□□ 0.67
NEDD4-202ENST00000435532 PEG3Q9GZU2 1588 aa19.24■□□□□ 0.67
NEDD4-202ENST00000435532 ST18O60284 1047 aa19.24■□□□□ 0.67
NEDD4-202ENST00000435532 CABP4P57796 275 aa19.24■□□□□ 0.67
NEDD4-202ENST00000435532 TCEAL9Q9UHQ7 104 aa19.24■□□□□ 0.67
NEDD4-202ENST00000435532 CCDC7Q96M83 1385 aa19.24■□□□□ 0.67
NEDD4-202ENST00000435532 ANKRD45Q5TZF3 282 aa19.24■□□□□ 0.67
NEDD4-202ENST00000435532 SPRYD3Q8NCJ5 442 aa19.24■□□□□ 0.67
NEDD4-202ENST00000435532 BCL2L13Q9BXK5 485 aa19.24■□□□□ 0.67
NEDD4-202ENST00000435532 SYAP1Q96A49 352 aaPredicted RBP19.23■□□□□ 0.67
NEDD4-202ENST00000435532 DRC7Q8IY82 874 aa19.23■□□□□ 0.67
NEDD4-202ENST00000435532 AIMP1Q12904 312 aaKnown RBP19.23■□□□□ 0.67
NEDD4-202ENST00000435532 CCDC30Q5VVM6 783 aa19.23■□□□□ 0.67
NEDD4-202ENST00000435532 CPLX2Q6PUV4 134 aaKnown RBP19.22■□□□□ 0.67
NEDD4-202ENST00000435532 KCNH5Q8NCM2 988 aa19.22■□□□□ 0.67
NEDD4-202ENST00000435532 ANO8Q9HCE9 1232 aaPredicted RBP19.22■□□□□ 0.67
NEDD4-202ENST00000435532 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
NEDD4-202ENST00000435532 RAD21O60216 631 aa19.21■□□□□ 0.67
NEDD4-202ENST00000435532 KIF7Q2M1P5 1343 aa19.21■□□□□ 0.67
NEDD4-202ENST00000435532 APPP05067 770 aa19.2■□□□□ 0.66
NEDD4-202ENST00000435532 DZIP1LQ8IYY4 767 aaKnown RBP19.2■□□□□ 0.66
NEDD4-202ENST00000435532 LRPPRCP42704 1394 aaKnown RBP19.2■□□□□ 0.66
NEDD4-202ENST00000435532 MTHFSP49914 203 aa19.2■□□□□ 0.66
NEDD4-202ENST00000435532 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
NEDD4-202ENST00000435532 CAMSAP2Q08AD1 1489 aa19.19■□□□□ 0.66
NEDD4-202ENST00000435532 FANCAO15360 1455 aa19.19■□□□□ 0.66
NEDD4-202ENST00000435532 DDX54Q8TDD1 881 aaKnown RBP19.19■□□□□ 0.66
NEDD4-202ENST00000435532 CNTLNQ9NXG0 1405 aa19.18■□□□□ 0.66
NEDD4-202ENST00000435532 TRDNQ13061 729 aa19.18■□□□□ 0.66
NEDD4-202ENST00000435532 CENPQQ7L2Z9 268 aaPredicted RBP19.18■□□□□ 0.66
NEDD4-202ENST00000435532 ERC2O15083 957 aa19.18■□□□□ 0.66
NEDD4-202ENST00000435532 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.16■□□□□ 0.66
NEDD4-202ENST00000435532 PPP1R1BQ9UD71 204 aaPredicted RBP19.16■□□□□ 0.66
NEDD4-202ENST00000435532 NCBP3Q53F19 620 aaKnown RBP19.16■□□□□ 0.66
NEDD4-202ENST00000435532 ERICH2A1L162 156 aa19.16■□□□□ 0.66
NEDD4-202ENST00000435532 FAM184AQ8NB25 1140 aa19.16■□□□□ 0.66
NEDD4-202ENST00000435532 ZBED9Q6R2W3 1325 aa19.16■□□□□ 0.66
NEDD4-202ENST00000435532 UBTFL1P0CB47 393 aaPredicted RBP19.15■□□□□ 0.66
NEDD4-202ENST00000435532 ZNF530Q6P9A1 599 aaPredicted RBP19.15■□□□□ 0.66
NEDD4-202ENST00000435532 ZKSCAN1P17029 563 aaPredicted RBP19.15■□□□□ 0.66
NEDD4-202ENST00000435532 H3BQV1 296 aa19.15■□□□□ 0.66
NEDD4-202ENST00000435532 IFFO2Q5TF58 517 aa19.15■□□□□ 0.66
NEDD4-202ENST00000435532 SF3A1Q15459 793 aaKnown RBP19.15■□□□□ 0.66
NEDD4-202ENST00000435532 DHX16O60231 1041 aaKnown RBP19.14■□□□□ 0.65
NEDD4-202ENST00000435532 RNF20Q5VTR2 975 aa19.14■□□□□ 0.65
NEDD4-202ENST00000435532 PRKAR2BP31323 418 aa19.13■□□□□ 0.65
NEDD4-202ENST00000435532 TRIM29Q14134 588 aa19.13■□□□□ 0.65
NEDD4-202ENST00000435532 NUDT16Q96DE0 195 aaKnown RBP19.13■□□□□ 0.65
NEDD4-202ENST00000435532 NOL8Q76FK4 1167 aaKnown RBP19.12■□□□□ 0.65
NEDD4-202ENST00000435532 NEUROD6Q96NK8 337 aa19.12■□□□□ 0.65
NEDD4-202ENST00000435532 BRD4O60885 1362 aaPredicted RBP19.12■□□□□ 0.65
NEDD4-202ENST00000435532 AAMPQ13685 434 aa19.12■□□□□ 0.65
NEDD4-202ENST00000435532 COG6Q9Y2V7 657 aa19.12■□□□□ 0.65
NEDD4-202ENST00000435532 CCDC61Q9Y6R9 512 aa19.12■□□□□ 0.65
NEDD4-202ENST00000435532 PCF11O94913 1555 aaKnown RBP19.12■□□□□ 0.65
NEDD4-202ENST00000435532 GLIPR1L2Q4G1C9 344 aa19.11■□□□□ 0.65
NEDD4-202ENST00000435532 REC8O95072 547 aa19.11■□□□□ 0.65
NEDD4-202ENST00000435532 RRP1P56182 461 aaKnown RBP19.11■□□□□ 0.65
NEDD4-202ENST00000435532 GNAI3P08754 354 aa19.11■□□□□ 0.65
NEDD4-202ENST00000435532 NBPF1Q3BBV0 1214 aa19.11■□□□□ 0.65
NEDD4-202ENST00000435532 CCDC27Q2M243 656 aa19.1■□□□□ 0.65
NEDD4-202ENST00000435532 UNC13AQ9UPW8 1703 aa19.1■□□□□ 0.65
NEDD4-202ENST00000435532 GNL3LQ9NVN8 582 aaKnown RBP19.1■□□□□ 0.65
NEDD4-202ENST00000435532 FAM177BA6PVY3 158 aa19.1■□□□□ 0.65
NEDD4-202ENST00000435532 SLC12A5Q9H2X9 1139 aa19.1■□□□□ 0.65
NEDD4-202ENST00000435532 SULT6B1Q6IMI4 303 aa19.09■□□□□ 0.65
NEDD4-202ENST00000435532 TBC1D2BQ9UPU7 963 aa19.09■□□□□ 0.65
NEDD4-202ENST00000435532 XPCQ01831 940 aaPredicted RBP19.09■□□□□ 0.65
NEDD4-202ENST00000435532 PPP2R1AP30153 589 aa19.08■□□□□ 0.64
NEDD4-202ENST00000435532 AMOTL2Q9Y2J4 779 aa19.08■□□□□ 0.64
NEDD4-202ENST00000435532 FAM135AQ9P2D6 1515 aa19.08■□□□□ 0.64
NEDD4-202ENST00000435532 TNRQ92752 1358 aa19.07■□□□□ 0.64
NEDD4-202ENST00000435532 PLIN1O60240 522 aa19.07■□□□□ 0.64
NEDD4-202ENST00000435532 NFXL1Q6ZNB6 911 aa19.07■□□□□ 0.64
NEDD4-202ENST00000435532 ANO2Q9NQ90 1003 aa19.07■□□□□ 0.64
NEDD4-202ENST00000435532 ATP6V1DQ9Y5K8 247 aa19.07■□□□□ 0.64
NEDD4-202ENST00000435532 CPLX1O14810 134 aa19.06■□□□□ 0.64
NEDD4-202ENST00000435532 CEBPAP49715 358 aaPredicted RBP19.06■□□□□ 0.64
NEDD4-202ENST00000435532 ZC3H6P61129 1189 aaKnown RBP19.06■□□□□ 0.64
NEDD4-202ENST00000435532 PHF8Q9UPP1 1060 aa19.06■□□□□ 0.64
NEDD4-202ENST00000435532 ASXL2Q76L83 1435 aa19.06■□□□□ 0.64
NEDD4-202ENST00000435532 BIVM-ERCC5R4GMW8 1640 aa19.05■□□□□ 0.64
NEDD4-202ENST00000435532 WASHC4Q2M389 1173 aa19.05■□□□□ 0.64
NEDD4-202ENST00000435532 TOM1O60784 492 aa19.05■□□□□ 0.64
NEDD4-202ENST00000435532 ERC1Q8IUD2 1116 aa19.05■□□□□ 0.64
NEDD4-202ENST00000435532 NINLQ9Y2I6 1382 aa19.05■□□□□ 0.64
NEDD4-202ENST00000435532 PTPN23Q9H3S7 1636 aa19.04■□□□□ 0.64
NEDD4-202ENST00000435532 TCP11L2Q8N4U5 519 aa19.04■□□□□ 0.64
NEDD4-202ENST00000435532 NGLY1Q96IV0 654 aa19.04■□□□□ 0.64
NEDD4-202ENST00000435532 CNNM1Q9NRU3 951 aa19.04■□□□□ 0.64
NEDD4-202ENST00000435532 CRBNQ96SW2 442 aa19.04■□□□□ 0.64
NEDD4-202ENST00000435532 DHX29Q7Z478 1369 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms