RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 VGFO15240 615 aaPredicted RBP27.41■■□□□ 1.98
SMG1P3-201ENST00000435197 PXDNQ92626 1479 aa27.38■■□□□ 1.97
SMG1P3-201ENST00000435197 BCL9LQ86UU0 1499 aa27.36■■□□□ 1.97
SMG1P3-201ENST00000435197 NAIPQ13075 1403 aa27.35■■□□□ 1.97
SMG1P3-201ENST00000435197 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.35■■□□□ 1.97
SMG1P3-201ENST00000435197 RPGRIP1LQ68CZ1 1315 aa27.35■■□□□ 1.97
SMG1P3-201ENST00000435197 NPHP3Q7Z494 1330 aa27.35■■□□□ 1.97
SMG1P3-201ENST00000435197 FOXD1Q16676 465 aa27.34■■□□□ 1.97
SMG1P3-201ENST00000435197 ZRANB1Q9UGI0 708 aa27.34■■□□□ 1.97
SMG1P3-201ENST00000435197 PPARGC1BQ86YN6 1023 aaKnown RBP27.33■■□□□ 1.97
SMG1P3-201ENST00000435197 ESCO1Q5FWF5 840 aa27.31■■□□□ 1.96
SMG1P3-201ENST00000435197 CCDC125Q86Z20 511 aa27.29■■□□□ 1.96
SMG1P3-201ENST00000435197 RRBP1Q9P2E9 1410 aaKnown RBP27.26■■□□□ 1.95
SMG1P3-201ENST00000435197 XPCQ01831 940 aaPredicted RBP27.26■■□□□ 1.95
SMG1P3-201ENST00000435197 GJD4Q96KN9 370 aaPredicted RBP27.26■■□□□ 1.95
SMG1P3-201ENST00000435197 GLI3P10071 1580 aa27.26■■□□□ 1.95
SMG1P3-201ENST00000435197 FOXO3O43524 673 aa27.25■■□□□ 1.95
SMG1P3-201ENST00000435197 KNDC1Q76NI1 1749 aa27.24■■□□□ 1.95
SMG1P3-201ENST00000435197 LRPPRCP42704 1394 aaKnown RBP27.24■■□□□ 1.95
SMG1P3-201ENST00000435197 FMN2Q9NZ56 1722 aa27.24■■□□□ 1.95
SMG1P3-201ENST00000435197 TECPR2O15040 1411 aa27.24■■□□□ 1.95
SMG1P3-201ENST00000435197 BRWD3Q6RI45 1802 aa27.23■■□□□ 1.95
SMG1P3-201ENST00000435197 KIF1AQ12756 1690 aa27.23■■□□□ 1.95
SMG1P3-201ENST00000435197 EP400Q96L91 3159 aa27.23■■□□□ 1.95
SMG1P3-201ENST00000435197 IFT172Q9UG01 1749 aa27.22■■□□□ 1.95
SMG1P3-201ENST00000435197 RALGAPBQ86X10 1494 aa27.22■■□□□ 1.95
SMG1P3-201ENST00000435197 SLIT2O94813 1529 aa27.21■■□□□ 1.95
SMG1P3-201ENST00000435197 USP32Q8NFA0 1604 aa27.21■■□□□ 1.95
SMG1P3-201ENST00000435197 SLC4A1APQ9BWU0 796 aaKnown RBP27.2■■□□□ 1.94
SMG1P3-201ENST00000435197 SRCAPQ6ZRS2 3230 aa27.2■■□□□ 1.94
SMG1P3-201ENST00000435197 BLMP54132 1417 aaPredicted RBP27.18■■□□□ 1.94
SMG1P3-201ENST00000435197 NUTM2FA1L443 756 aa27.18■■□□□ 1.94
SMG1P3-201ENST00000435197 ADGRF5Q8IZF2 1346 aa27.17■■□□□ 1.94
SMG1P3-201ENST00000435197 WAPLQ7Z5K2 1190 aa27.17■■□□□ 1.94
SMG1P3-201ENST00000435197 UNC5CLQ8IV45 518 aa27.17■■□□□ 1.94
SMG1P3-201ENST00000435197 STK26Q9P289 416 aa27.16■■□□□ 1.94
SMG1P3-201ENST00000435197 SPATA31A3Q5VYP0 1347 aa27.16■■□□□ 1.94
SMG1P3-201ENST00000435197 CCDC144AA2RUR9 1427 aa27.15■■□□□ 1.94
SMG1P3-201ENST00000435197 PLEKHH1Q9ULM0 1364 aa27.14■■□□□ 1.94
SMG1P3-201ENST00000435197 PLCH1Q4KWH8 1693 aa27.14■■□□□ 1.93
SMG1P3-201ENST00000435197 ABCC11Q96J66 1382 aa27.13■■□□□ 1.93
SMG1P3-201ENST00000435197 RGPD8O14715 1765 aaPredicted RBP27.13■■□□□ 1.93
SMG1P3-201ENST00000435197 ABCA3Q99758 1704 aa27.12■■□□□ 1.93
SMG1P3-201ENST00000435197 NWD2Q9ULI1 1742 aa27.12■■□□□ 1.93
SMG1P3-201ENST00000435197 SPATA31E1Q6ZUB1 1445 aa27.11■■□□□ 1.93
SMG1P3-201ENST00000435197 ANKRD30BQ9BXX2 1392 aa27.09■■□□□ 1.93
SMG1P3-201ENST00000435197 PIK3C2GO75747 1445 aa27.08■■□□□ 1.93
SMG1P3-201ENST00000435197 LRP5O75197 1615 aa27.08■■□□□ 1.93
SMG1P3-201ENST00000435197 TNS3Q68CZ2 1445 aa27.07■■□□□ 1.92
SMG1P3-201ENST00000435197 TMEM132EQ6IEE7 984 aa27.07■■□□□ 1.92
SMG1P3-201ENST00000435197 KRT28Q7Z3Y7 464 aa27.07■■□□□ 1.92
SMG1P3-201ENST00000435197 DEFB132Q7Z7B7 95 aa27.07■■□□□ 1.92
SMG1P3-201ENST00000435197 YTHDC2Q9H6S0 1430 aaKnown RBP27.07■■□□□ 1.92
SMG1P3-201ENST00000435197 RGL3Q3MIN7 710 aa27.06■■□□□ 1.92
SMG1P3-201ENST00000435197 SEPT12Q8IYM1 358 aa27.04■■□□□ 1.92
SMG1P3-201ENST00000435197 SF3B2Q13435 895 aaKnown RBP27.03■■□□□ 1.92
SMG1P3-201ENST00000435197 VPS72Q15906 364 aa27.03■■□□□ 1.92
SMG1P3-201ENST00000435197 HAP1P54257 671 aaPredicted RBP27.02■■□□□ 1.92
SMG1P3-201ENST00000435197 CABLES1Q8TDN4 633 aa27■■□□□ 1.91
SMG1P3-201ENST00000435197 PHF8Q9UPP1 1060 aa27■■□□□ 1.91
SMG1P3-201ENST00000435197 NRXN1Q9ULB1 1477 aa27■■□□□ 1.91
SMG1P3-201ENST00000435197 NRAPQ86VF7 1730 aa26.99■■□□□ 1.91
SMG1P3-201ENST00000435197 SBNO1A3KN83 1393 aa26.98■■□□□ 1.91
SMG1P3-201ENST00000435197 ONECUT3O60422 494 aaPredicted RBP26.98■■□□□ 1.91
SMG1P3-201ENST00000435197 PSME1Q06323 249 aa26.98■■□□□ 1.91
SMG1P3-201ENST00000435197 SIRT1Q96EB6 747 aa26.98■■□□□ 1.91
SMG1P3-201ENST00000435197 KRT27Q7Z3Y8 459 aa26.96■■□□□ 1.91
SMG1P3-201ENST00000435197 CCDC9Q9Y3X0 531 aaKnown RBP26.96■■□□□ 1.91
SMG1P3-201ENST00000435197 ARHGEF10O15013 1369 aa26.96■■□□□ 1.91
SMG1P3-201ENST00000435197 PLEKHG5O94827 1062 aa26.95■■□□□ 1.9
SMG1P3-201ENST00000435197 TRPM3Q9HCF6 1732 aaPredicted RBP26.93■■□□□ 1.9
SMG1P3-201ENST00000435197 LMOD2Q6P5Q4 547 aa26.91■■□□□ 1.9
SMG1P3-201ENST00000435197 MPHOSPH9Q99550 1183 aa26.91■■□□□ 1.9
SMG1P3-201ENST00000435197 C14orf93Q9H972 538 aaKnown RBP26.91■■□□□ 1.9
SMG1P3-201ENST00000435197 RGPD1P0DJD0 1748 aa26.9■■□□□ 1.9
SMG1P3-201ENST00000435197 ADGRB2O60241 1585 aa26.89■■□□□ 1.9
SMG1P3-201ENST00000435197 DHX57Q6P158 1386 aaKnown RBP26.89■■□□□ 1.9
SMG1P3-201ENST00000435197 FAM83GA6ND36 823 aa26.89■■□□□ 1.9
SMG1P3-201ENST00000435197 ANKARQ7Z5J8 1434 aa26.89■■□□□ 1.89
SMG1P3-201ENST00000435197 COL14A1Q05707 1796 aaKnown RBP26.89■■□□□ 1.89
SMG1P3-201ENST00000435197 ALS2Q96Q42 1657 aa26.89■■□□□ 1.89
SMG1P3-201ENST00000435197 BAG6P46379 1132 aa26.88■■□□□ 1.89
SMG1P3-201ENST00000435197 DLC1Q96QB1 1528 aa26.87■■□□□ 1.89
SMG1P3-201ENST00000435197 A0A0G2JS52 829 aa26.87■■□□□ 1.89
SMG1P3-201ENST00000435197 MYT1Q01538 1121 aa26.87■■□□□ 1.89
SMG1P3-201ENST00000435197 PSDA5PKW4 1024 aaPredicted RBP26.86■■□□□ 1.89
SMG1P3-201ENST00000435197 CFAP70Q5T0N1 1121 aa26.86■■□□□ 1.89
SMG1P3-201ENST00000435197 PRAM1Q96QH2 718 aa26.86■■□□□ 1.89
SMG1P3-201ENST00000435197 SAFB2Q14151 953 aaKnown RBP eCLIP26.85■■□□□ 1.89
SMG1P3-201ENST00000435197 FAM98CQ17RN3 349 aaKnown RBP26.84■■□□□ 1.89
SMG1P3-201ENST00000435197 PMFBP1Q8TBY8 1022 aa26.84■■□□□ 1.89
SMG1P3-201ENST00000435197 CRYBG1Q9Y4K1 1723 aa26.84■■□□□ 1.89
SMG1P3-201ENST00000435197 HRCP23327 699 aa26.83■■□□□ 1.89
SMG1P3-201ENST00000435197 TNS1Q9HBL0 1735 aaKnown RBP26.82■■□□□ 1.88
SMG1P3-201ENST00000435197 THSD7AQ9UPZ6 1657 aa26.82■■□□□ 1.88
SMG1P3-201ENST00000435197 BTG4Q9NY30 223 aa26.81■■□□□ 1.88
SMG1P3-201ENST00000435197 POGKQ9P215 609 aa26.78■■□□□ 1.88
SMG1P3-201ENST00000435197 ADGRB1O14514 1584 aa26.78■■□□□ 1.88
SMG1P3-201ENST00000435197 DISP2A7MBM2 1401 aa26.76■■□□□ 1.87
SMG1P3-201ENST00000435197 GPRASP1Q5JY77 1395 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms