RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 PRAG1Q86YV5 1406 aa17.48■□□□□ 0.39
CHRNA1-207ENST00000435083 FNBP4Q8N3X1 1017 aaPredicted RBP17.47■□□□□ 0.39
CHRNA1-207ENST00000435083 NPHP3Q7Z494 1330 aa17.46■□□□□ 0.39
CHRNA1-207ENST00000435083 COL22A1Q8NFW1 1626 aaPredicted RBP17.45■□□□□ 0.38
CHRNA1-207ENST00000435083 XPCQ01831 940 aaPredicted RBP17.45■□□□□ 0.38
CHRNA1-207ENST00000435083 STK26Q9P289 416 aa17.45■□□□□ 0.38
CHRNA1-207ENST00000435083 ATRNO75882 1429 aa17.44■□□□□ 0.38
CHRNA1-207ENST00000435083 NUTM2FA1L443 756 aa17.44■□□□□ 0.38
CHRNA1-207ENST00000435083 FOXO3O43524 673 aa17.44■□□□□ 0.38
CHRNA1-207ENST00000435083 FOXD1Q16676 465 aa17.44■□□□□ 0.38
CHRNA1-207ENST00000435083 CDC42BPGQ6DT37 1551 aa17.43■□□□□ 0.38
CHRNA1-207ENST00000435083 ADGRF5Q8IZF2 1346 aa17.43■□□□□ 0.38
CHRNA1-207ENST00000435083 MYOM2P54296 1465 aa17.42■□□□□ 0.38
CHRNA1-207ENST00000435083 RGL3Q3MIN7 710 aa17.42■□□□□ 0.38
CHRNA1-207ENST00000435083 WAPLQ7Z5K2 1190 aa17.42■□□□□ 0.38
CHRNA1-207ENST00000435083 PXDNQ92626 1479 aa17.41■□□□□ 0.38
CHRNA1-207ENST00000435083 MARF1Q9Y4F3 1742 aaKnown RBP17.39■□□□□ 0.38
CHRNA1-207ENST00000435083 LRPPRCP42704 1394 aaKnown RBP17.39■□□□□ 0.37
CHRNA1-207ENST00000435083 BCL9LQ86UU0 1499 aa17.39■□□□□ 0.37
CHRNA1-207ENST00000435083 ZRANB1Q9UGI0 708 aa17.39■□□□□ 0.37
CHRNA1-207ENST00000435083 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
CHRNA1-207ENST00000435083 TMEM132EQ6IEE7 984 aa17.38■□□□□ 0.37
CHRNA1-207ENST00000435083 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
CHRNA1-207ENST00000435083 CCDC125Q86Z20 511 aa17.36■□□□□ 0.37
CHRNA1-207ENST00000435083 PLEKHH1Q9ULM0 1364 aa17.36■□□□□ 0.37
CHRNA1-207ENST00000435083 ABCC11Q96J66 1382 aa17.35■□□□□ 0.37
CHRNA1-207ENST00000435083 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
CHRNA1-207ENST00000435083 TECPR2O15040 1411 aa17.35■□□□□ 0.37
CHRNA1-207ENST00000435083 IFT172Q9UG01 1749 aa17.33■□□□□ 0.37
CHRNA1-207ENST00000435083 SPATA31E1Q6ZUB1 1445 aa17.33■□□□□ 0.37
CHRNA1-207ENST00000435083 SPATA31A3Q5VYP0 1347 aa17.33■□□□□ 0.37
CHRNA1-207ENST00000435083 KRT28Q7Z3Y7 464 aa17.33■□□□□ 0.37
CHRNA1-207ENST00000435083 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.37
CHRNA1-207ENST00000435083 FMN2Q9NZ56 1722 aa17.33■□□□□ 0.36
CHRNA1-207ENST00000435083 MPHOSPH9Q99550 1183 aa17.32■□□□□ 0.36
CHRNA1-207ENST00000435083 KNDC1Q76NI1 1749 aa17.32■□□□□ 0.36
CHRNA1-207ENST00000435083 HAP1P54257 671 aaPredicted RBP17.32■□□□□ 0.36
CHRNA1-207ENST00000435083 YTHDC2Q9H6S0 1430 aaKnown RBP17.31■□□□□ 0.36
CHRNA1-207ENST00000435083 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.31■□□□□ 0.36
CHRNA1-207ENST00000435083 KIF1AQ12756 1690 aa17.31■□□□□ 0.36
CHRNA1-207ENST00000435083 PLEKHG5O94827 1062 aa17.3■□□□□ 0.36
CHRNA1-207ENST00000435083 SLIT2O94813 1529 aa17.3■□□□□ 0.36
CHRNA1-207ENST00000435083 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
CHRNA1-207ENST00000435083 PIK3C2GO75747 1445 aa17.3■□□□□ 0.36
CHRNA1-207ENST00000435083 GLI3P10071 1580 aa17.29■□□□□ 0.36
CHRNA1-207ENST00000435083 PHF8Q9UPP1 1060 aa17.28■□□□□ 0.36
CHRNA1-207ENST00000435083 RGPD8O14715 1765 aaPredicted RBP17.28■□□□□ 0.36
CHRNA1-207ENST00000435083 PSME1Q06323 249 aa17.28■□□□□ 0.36
CHRNA1-207ENST00000435083 CABLES1Q8TDN4 633 aa17.28■□□□□ 0.36
CHRNA1-207ENST00000435083 SIRT1Q96EB6 747 aa17.28■□□□□ 0.36
CHRNA1-207ENST00000435083 USP32Q8NFA0 1604 aa17.27■□□□□ 0.36
CHRNA1-207ENST00000435083 LMOD2Q6P5Q4 547 aa17.27■□□□□ 0.35
CHRNA1-207ENST00000435083 C14orf93Q9H972 538 aaKnown RBP17.26■□□□□ 0.35
CHRNA1-207ENST00000435083 CCDC9Q9Y3X0 531 aaKnown RBP17.26■□□□□ 0.35
CHRNA1-207ENST00000435083 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
CHRNA1-207ENST00000435083 BLMP54132 1417 aaPredicted RBP17.25■□□□□ 0.35
CHRNA1-207ENST00000435083 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
CHRNA1-207ENST00000435083 SAFB2Q14151 953 aaKnown RBP eCLIP17.25■□□□□ 0.35
CHRNA1-207ENST00000435083 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
CHRNA1-207ENST00000435083 SEPT12Q8IYM1 358 aa17.25■□□□□ 0.35
CHRNA1-207ENST00000435083 DHX57Q6P158 1386 aaKnown RBP17.25■□□□□ 0.35
CHRNA1-207ENST00000435083 SF3B2Q13435 895 aaKnown RBP17.24■□□□□ 0.35
CHRNA1-207ENST00000435083 VPS72Q15906 364 aa17.23■□□□□ 0.35
CHRNA1-207ENST00000435083 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
CHRNA1-207ENST00000435083 PRAM1Q96QH2 718 aa17.23■□□□□ 0.35
CHRNA1-207ENST00000435083 SBNO1A3KN83 1393 aa17.21■□□□□ 0.35
CHRNA1-207ENST00000435083 PLCH1Q4KWH8 1693 aa17.21■□□□□ 0.35
CHRNA1-207ENST00000435083 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
CHRNA1-207ENST00000435083 POGKQ9P215 609 aa17.21■□□□□ 0.35
CHRNA1-207ENST00000435083 NRXN1Q9ULB1 1477 aa17.21■□□□□ 0.35
CHRNA1-207ENST00000435083 ARHGEF10O15013 1369 aa17.2■□□□□ 0.34
CHRNA1-207ENST00000435083 NWD2Q9ULI1 1742 aa17.2■□□□□ 0.34
CHRNA1-207ENST00000435083 A0A0G2JS52 829 aa17.19■□□□□ 0.34
CHRNA1-207ENST00000435083 MYT1Q01538 1121 aa17.19■□□□□ 0.34
CHRNA1-207ENST00000435083 EP400Q96L91 3159 aa17.19■□□□□ 0.34
CHRNA1-207ENST00000435083 FAM83GA6ND36 823 aa17.19■□□□□ 0.34
CHRNA1-207ENST00000435083 KRT27Q7Z3Y8 459 aa17.19■□□□□ 0.34
CHRNA1-207ENST00000435083 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
CHRNA1-207ENST00000435083 ONECUT3O60422 494 aaPredicted RBP17.18■□□□□ 0.34
CHRNA1-207ENST00000435083 HIRIP3Q9BW71 556 aaPredicted RBP17.15■□□□□ 0.34
CHRNA1-207ENST00000435083 ANKARQ7Z5J8 1434 aa17.15■□□□□ 0.34
CHRNA1-207ENST00000435083 TRAK1Q9UPV9 953 aa17.15■□□□□ 0.34
CHRNA1-207ENST00000435083 ACIN1Q9UKV3 1341 aaKnown RBP17.15■□□□□ 0.34
CHRNA1-207ENST00000435083 FAM98CQ17RN3 349 aaKnown RBP17.14■□□□□ 0.33
CHRNA1-207ENST00000435083 BTG4Q9NY30 223 aa17.14■□□□□ 0.33
CHRNA1-207ENST00000435083 DLC1Q96QB1 1528 aa17.14■□□□□ 0.33
CHRNA1-207ENST00000435083 GPRASP1Q5JY77 1395 aa17.13■□□□□ 0.33
CHRNA1-207ENST00000435083 MINK1Q8N4C8 1332 aaPredicted RBP17.13■□□□□ 0.33
CHRNA1-207ENST00000435083 SRCAPQ6ZRS2 3230 aa17.13■□□□□ 0.33
CHRNA1-207ENST00000435083 BAG6P46379 1132 aa17.12■□□□□ 0.33
CHRNA1-207ENST00000435083 TRPM3Q9HCF6 1732 aaPredicted RBP17.11■□□□□ 0.33
CHRNA1-207ENST00000435083 ADGRB2O60241 1585 aa17.11■□□□□ 0.33
CHRNA1-207ENST00000435083 NRAPQ86VF7 1730 aa17.11■□□□□ 0.33
CHRNA1-207ENST00000435083 KDM2AQ9Y2K7 1162 aa17.11■□□□□ 0.33
CHRNA1-207ENST00000435083 PRR36Q9H6K5 1346 aa17.1■□□□□ 0.33
CHRNA1-207ENST00000435083 PSDA5PKW4 1024 aaPredicted RBP17.1■□□□□ 0.33
CHRNA1-207ENST00000435083 EIF3AQ14152 1382 aaKnown RBP17.09■□□□□ 0.33
CHRNA1-207ENST00000435083 COL14A1Q05707 1796 aaKnown RBP17.09■□□□□ 0.33
CHRNA1-207ENST00000435083 PAK3O75914 559 aaPredicted RBP17.09■□□□□ 0.33
CHRNA1-207ENST00000435083 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
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