RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 FAM135BQ49AJ0 1406 aa15.79■□□□□ 0.12
PCOTH-203ENST00000435039 TMF1P82094 1093 aa15.79■□□□□ 0.12
PCOTH-203ENST00000435039 TRAK1Q9UPV9 953 aa15.79■□□□□ 0.12
PCOTH-203ENST00000435039 TULP4Q9NRJ4 1543 aa15.78■□□□□ 0.12
PCOTH-203ENST00000435039 C11orf95C9JLR9 678 aaPredicted RBP15.78■□□□□ 0.12
PCOTH-203ENST00000435039 ADGRB2O60241 1585 aa15.78■□□□□ 0.12
PCOTH-203ENST00000435039 NWD1Q149M9 1564 aa15.77■□□□□ 0.11
PCOTH-203ENST00000435039 CDCA8Q53HL2 280 aa15.76■□□□□ 0.11
PCOTH-203ENST00000435039 TBX22Q9Y458 520 aa15.76■□□□□ 0.11
PCOTH-203ENST00000435039 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
PCOTH-203ENST00000435039 BCANQ96GW7 911 aa15.75■□□□□ 0.11
PCOTH-203ENST00000435039 PTPRUQ92729 1446 aa15.75■□□□□ 0.11
PCOTH-203ENST00000435039 DDX10Q13206 875 aaKnown RBP15.73■□□□□ 0.11
PCOTH-203ENST00000435039 SIRT1Q96EB6 747 aa15.73■□□□□ 0.11
PCOTH-203ENST00000435039 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
PCOTH-203ENST00000435039 STK26Q9P289 416 aa15.72■□□□□ 0.11
PCOTH-203ENST00000435039 PRAM1Q96QH2 718 aa15.71■□□□□ 0.11
PCOTH-203ENST00000435039 SLC26A8Q96RN1 970 aa15.7■□□□□ 0.1
PCOTH-203ENST00000435039 ROBO2Q9HCK4 1378 aa15.7■□□□□ 0.1
PCOTH-203ENST00000435039 PUS7Q96PZ0 661 aaKnown RBP15.69■□□□□ 0.1
PCOTH-203ENST00000435039 POGKQ9P215 609 aa15.69■□□□□ 0.1
PCOTH-203ENST00000435039 PLEKHH1Q9ULM0 1364 aa15.69■□□□□ 0.1
PCOTH-203ENST00000435039 NKTRP30414 1462 aaKnown RBP15.69■□□□□ 0.1
PCOTH-203ENST00000435039 EVC2Q86UK5 1308 aa15.68■□□□□ 0.1
PCOTH-203ENST00000435039 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.68■□□□□ 0.1
PCOTH-203ENST00000435039 NINLQ9Y2I6 1382 aa15.67■□□□□ 0.1
PCOTH-203ENST00000435039 POLR3GLQ9BT43 218 aa15.67■□□□□ 0.1
PCOTH-203ENST00000435039 ATAD2Q6PL18 1390 aa15.66■□□□□ 0.1
PCOTH-203ENST00000435039 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
PCOTH-203ENST00000435039 TOPAZ1Q8N9V7 1692 aa15.66■□□□□ 0.1
PCOTH-203ENST00000435039 NALCNQ8IZF0 1738 aa15.65■□□□□ 0.1
PCOTH-203ENST00000435039 CDC42BPGQ6DT37 1551 aa15.65■□□□□ 0.1
PCOTH-203ENST00000435039 USP32Q8NFA0 1604 aa15.65■□□□□ 0.1
PCOTH-203ENST00000435039 AMOTL2Q9Y2J4 779 aa15.64■□□□□ 0.09
PCOTH-203ENST00000435039 TMEM94Q12767 1356 aa15.63■□□□□ 0.09
PCOTH-203ENST00000435039 ITSN1Q15811 1721 aa15.63■□□□□ 0.09
PCOTH-203ENST00000435039 SAFB2Q14151 953 aaKnown RBP eCLIP15.63■□□□□ 0.09
PCOTH-203ENST00000435039 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
PCOTH-203ENST00000435039 KCNA6P17658 529 aa15.62■□□□□ 0.09
PCOTH-203ENST00000435039 WAPLQ7Z5K2 1190 aa15.62■□□□□ 0.09
PCOTH-203ENST00000435039 ATP7BP35670 1465 aa15.62■□□□□ 0.09
PCOTH-203ENST00000435039 ROBO1Q9Y6N7 1651 aa15.62■□□□□ 0.09
PCOTH-203ENST00000435039 FMN2Q9NZ56 1722 aa15.62■□□□□ 0.09
PCOTH-203ENST00000435039 ANP32CO43423 234 aa15.6■□□□□ 0.09
PCOTH-203ENST00000435039 ADGRL3Q9HAR2 1447 aa15.6■□□□□ 0.09
PCOTH-203ENST00000435039 ANKRD36BQ8N2N9 1353 aa15.59■□□□□ 0.09
PCOTH-203ENST00000435039 WASLO00401 505 aaPredicted RBP15.58■□□□□ 0.08
PCOTH-203ENST00000435039 SRPK2P78362 688 aaKnown RBP15.58■□□□□ 0.08
PCOTH-203ENST00000435039 PROSER2Q86WR7 435 aaPredicted RBP15.58■□□□□ 0.08
PCOTH-203ENST00000435039 RBM33Q96EV2 1170 aaKnown RBP15.58■□□□□ 0.08
PCOTH-203ENST00000435039 KTN1Q86UP2 1357 aaKnown RBP15.58■□□□□ 0.08
PCOTH-203ENST00000435039 MIER1Q8N108 512 aa15.57■□□□□ 0.08
PCOTH-203ENST00000435039 RGS17Q9UGC6 210 aaPredicted RBP15.57■□□□□ 0.08
PCOTH-203ENST00000435039 ANKARQ7Z5J8 1434 aa15.57■□□□□ 0.08
PCOTH-203ENST00000435039 MON2Q7Z3U7 1717 aa15.57■□□□□ 0.08
PCOTH-203ENST00000435039 AKAP12Q02952 1782 aa15.57■□□□□ 0.08
PCOTH-203ENST00000435039 CDK19Q9BWU1 502 aa15.56■□□□□ 0.08
PCOTH-203ENST00000435039 CABP2Q9NPB3 220 aa15.56■□□□□ 0.08
PCOTH-203ENST00000435039 NPC1L1Q9UHC9 1359 aa15.56■□□□□ 0.08
PCOTH-203ENST00000435039 CD163L1Q9NR16 1453 aa15.55■□□□□ 0.08
PCOTH-203ENST00000435039 PANK3Q9H999 370 aa15.55■□□□□ 0.08
PCOTH-203ENST00000435039 NCOA3Q9Y6Q9 1424 aa15.54■□□□□ 0.08
PCOTH-203ENST00000435039 PER1O15534 1290 aaPredicted RBP15.54■□□□□ 0.08
PCOTH-203ENST00000435039 ANKRD26Q9UPS8 1709 aa15.54■□□□□ 0.08
PCOTH-203ENST00000435039 NRKQ7Z2Y5 1582 aa15.53■□□□□ 0.08
PCOTH-203ENST00000435039 PPIP5K1Q6PFW1 1433 aa15.53■□□□□ 0.08
PCOTH-203ENST00000435039 NSD3Q9BZ95 1437 aa15.53■□□□□ 0.08
PCOTH-203ENST00000435039 A0A1W2PP64 1363 aa15.53■□□□□ 0.08
PCOTH-203ENST00000435039 MSH6P52701 1360 aa15.53■□□□□ 0.08
PCOTH-203ENST00000435039 PHLPP1O60346 1717 aa15.53■□□□□ 0.08
PCOTH-203ENST00000435039 DCCP43146 1447 aa15.52■□□□□ 0.08
PCOTH-203ENST00000435039 KIF20BQ96Q89 1820 aa15.52■□□□□ 0.08
PCOTH-203ENST00000435039 PARD3Q8TEW0 1356 aa15.52■□□□□ 0.08
PCOTH-203ENST00000435039 PRKRIP1Q9H875 184 aaPredicted RBP15.52■□□□□ 0.08
PCOTH-203ENST00000435039 TMC1Q8TDI8 760 aa15.51■□□□□ 0.07
PCOTH-203ENST00000435039 NSD2O96028 1365 aa15.5■□□□□ 0.07
PCOTH-203ENST00000435039 CCER2I3L3R5 266 aa15.5■□□□□ 0.07
PCOTH-203ENST00000435039 SLAIN2Q9P270 581 aa15.5■□□□□ 0.07
PCOTH-203ENST00000435039 KNSTRNQ9Y448 316 aa15.5■□□□□ 0.07
PCOTH-203ENST00000435039 CPSF1Q10570 1443 aaKnown RBP15.5■□□□□ 0.07
PCOTH-203ENST00000435039 PRR36Q9H6K5 1346 aa15.49■□□□□ 0.07
PCOTH-203ENST00000435039 SLC12A5Q9H2X9 1139 aa15.49■□□□□ 0.07
PCOTH-203ENST00000435039 TERF2IPQ9NYB0 399 aa15.49■□□□□ 0.07
PCOTH-203ENST00000435039 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
PCOTH-203ENST00000435039 RALBP1Q15311 655 aa15.48■□□□□ 0.07
PCOTH-203ENST00000435039 AMER1Q5JTC6 1135 aaPredicted RBP15.48■□□□□ 0.07
PCOTH-203ENST00000435039 NUDT16Q96DE0 195 aaKnown RBP15.48■□□□□ 0.07
PCOTH-203ENST00000435039 CCDC61Q9Y6R9 512 aa15.48■□□□□ 0.07
PCOTH-203ENST00000435039 KIF1AQ12756 1690 aa15.48■□□□□ 0.07
PCOTH-203ENST00000435039 COL16A1Q07092 1604 aaPredicted RBP15.47■□□□□ 0.07
PCOTH-203ENST00000435039 EDC4Q6P2E9 1401 aaKnown RBP15.47■□□□□ 0.07
PCOTH-203ENST00000435039 HDGFL2Q7Z4V5 671 aaPredicted RBP15.47■□□□□ 0.07
PCOTH-203ENST00000435039 POTEAQ6S8J7 498 aa15.46■□□□□ 0.07
PCOTH-203ENST00000435039 CARD14Q9BXL6 1004 aa15.45■□□□□ 0.06
PCOTH-203ENST00000435039 CGNL1Q0VF96 1302 aa15.44■□□□□ 0.06
PCOTH-203ENST00000435039 MYBBP1AQ9BQG0 1328 aaKnown RBP15.44■□□□□ 0.06
PCOTH-203ENST00000435039 CABP1Q9NZU7 370 aa15.44■□□□□ 0.06
PCOTH-203ENST00000435039 POLR3AO14802 1390 aaPredicted RBP15.44■□□□□ 0.06
PCOTH-203ENST00000435039 JCADQ9P266 1359 aa15.44■□□□□ 0.06
PCOTH-203ENST00000435039 PLEKHG3A1L390 1219 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms