RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, human

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCAL1-208	ENST00000434435	XIRP1	Q702N8	1843 aa	Known RBP	32.51	■■■□□ 2.79
SMARCAL1-208	ENST00000434435	SLC24A1	O60721	1099 aa		32.49	■■■□□ 2.79
SMARCAL1-208	ENST00000434435	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.47	■■■□□ 2.79
SMARCAL1-208	ENST00000434435	PROSER2	Q86WR7	435 aa	Predicted RBP	32.46	■■■□□ 2.79
SMARCAL1-208	ENST00000434435	TULP4	Q9NRJ4	1543 aa		32.46	■■■□□ 2.79
SMARCAL1-208	ENST00000434435	ZNF316	A6NFI3	1004 aa	Predicted RBP	32.44	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	TMF1	P82094	1093 aa		32.44	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	ADGRL3	Q9HAR2	1447 aa		32.43	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	LRRC7	Q96NW7	1537 aa		32.42	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	NCOA3	Q9Y6Q9	1424 aa		32.42	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	CDC42BPG	Q6DT37	1551 aa		32.41	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	LTBP4	Q8N2S1	1624 aa		32.41	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	DISP3	Q9P2K9	1392 aa		32.41	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	EVC2	Q86UK5	1308 aa		32.4	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	TMEM94	Q12767	1356 aa		32.39	■■■□□ 2.78
SMARCAL1-208	ENST00000434435	FMN2	Q9NZ56	1722 aa		32.38	■■■□□ 2.77
SMARCAL1-208	ENST00000434435	C14orf37	Q86TY3	774 aa		32.36	■■■□□ 2.77
SMARCAL1-208	ENST00000434435	RBM33	Q96EV2	1170 aa	Known RBP	32.36	■■■□□ 2.77
SMARCAL1-208	ENST00000434435	CDCA8	Q53HL2	280 aa		32.35	■■■□□ 2.77
SMARCAL1-208	ENST00000434435	CCDC7	Q96M83	1385 aa		32.32	■■■□□ 2.77
SMARCAL1-208	ENST00000434435	ITSN1	Q15811	1721 aa		32.32	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	C11orf95	C9JLR9	678 aa	Predicted RBP	32.32	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	WASL	O00401	505 aa	Predicted RBP	32.32	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	KIF7	Q2M1P5	1343 aa		32.31	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	MYOM1	P52179	1685 aa		32.31	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	RGPD8	O14715	1765 aa	Predicted RBP	32.3	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	DCC	P43146	1447 aa		32.29	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	CDK19	Q9BWU1	502 aa		32.29	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	WASHC2A	Q641Q2	1341 aa		32.28	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	SRPK2	P78362	688 aa	Known RBP	32.28	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	TOPAZ1	Q8N9V7	1692 aa		32.27	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	USP32	Q8NFA0	1604 aa		32.27	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	PUS7	Q96PZ0	661 aa	Known RBP	32.27	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	POLR3GL	Q9BT43	218 aa		32.27	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	MSH6	P52701	1360 aa		32.27	■■■□□ 2.76
SMARCAL1-208	ENST00000434435	ATAD2	Q6PL18	1390 aa		32.25	■■■□□ 2.75
SMARCAL1-208	ENST00000434435	C19orf44	Q9H6X5	657 aa		32.25	■■■□□ 2.75
SMARCAL1-208	ENST00000434435	CABP2	Q9NPB3	220 aa		32.24	■■■□□ 2.75
SMARCAL1-208	ENST00000434435	ATP7B	P35670	1465 aa		32.23	■■■□□ 2.75
SMARCAL1-208	ENST00000434435	ANKAR	Q7Z5J8	1434 aa		32.22	■■■□□ 2.75
SMARCAL1-208	ENST00000434435	ATF3	P18847	181 aa		32.17	■■■□□ 2.74
SMARCAL1-208	ENST00000434435	NINL	Q9Y2I6	1382 aa		32.16	■■■□□ 2.74
SMARCAL1-208	ENST00000434435	CADPS2	Q86UW7	1296 aa		32.15	■■■□□ 2.74
SMARCAL1-208	ENST00000434435	NUDT16	Q96DE0	195 aa	Known RBP	32.15	■■■□□ 2.74
SMARCAL1-208	ENST00000434435	PRR36	Q9H6K5	1346 aa		32.15	■■■□□ 2.74
SMARCAL1-208	ENST00000434435	NUTM2F	A1L443	756 aa		32.13	■■■□□ 2.73
SMARCAL1-208	ENST00000434435	AKAP12	Q02952	1782 aa		32.12	■■■□□ 2.73
SMARCAL1-208	ENST00000434435	IQSEC2	Q5JU85	1478 aa		32.12	■■■□□ 2.73
SMARCAL1-208	ENST00000434435	MST1R	Q04912	1400 aa		32.12	■■■□□ 2.73
SMARCAL1-208	ENST00000434435	PPIP5K1	Q6PFW1	1433 aa		32.12	■■■□□ 2.73
SMARCAL1-208	ENST00000434435	CCDC61	Q9Y6R9	512 aa		32.11	■■■□□ 2.73
SMARCAL1-208	ENST00000434435	KIF1A	Q12756	1690 aa		32.11	■■■□□ 2.73
SMARCAL1-208	ENST00000434435	TMC1	Q8TDI8	760 aa		32.1	■■■□□ 2.73
SMARCAL1-208	ENST00000434435	C1orf167	Q5SNV9	1468 aa		32.09	■■■□□ 2.73
SMARCAL1-208	ENST00000434435	MON2	Q7Z3U7	1717 aa		32.06	■■■□□ 2.72
SMARCAL1-208	ENST00000434435	DDX10	Q13206	875 aa	Known RBP	32.04	■■■□□ 2.72
SMARCAL1-208	ENST00000434435	SLC12A5	Q9H2X9	1139 aa		32.04	■■■□□ 2.72
SMARCAL1-208	ENST00000434435	CABP1	Q9NZU7	370 aa		32.03	■■■□□ 2.72
SMARCAL1-208	ENST00000434435	ANKRD36B	Q8N2N9	1353 aa		32.02	■■■□□ 2.72
SMARCAL1-208	ENST00000434435	CD163L1	Q9NR16	1453 aa		32	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	PLEKHG3	A1L390	1219 aa		32	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	ESCO1	Q5FWF5	840 aa		31.98	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	TERF2IP	Q9NYB0	399 aa		31.98	■■■□□ 2.71
SMARCAL1-208	ENST00000434435		A0A1W2PP64	1363 aa		31.97	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.97	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	CERK	Q8TCT0	537 aa		31.97	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	PHF8	Q9UPP1	1060 aa		31.97	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	CPSF1	Q10570	1443 aa	Known RBP	31.96	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	PANK3	Q9H999	370 aa		31.96	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	SLAIN2	Q9P270	581 aa		31.96	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	POLR3A	O14802	1390 aa	Predicted RBP	31.95	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	NRK	Q7Z2Y5	1582 aa		31.95	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	PMFBP1	Q8TBY8	1022 aa		31.95	■■■□□ 2.71
SMARCAL1-208	ENST00000434435	ORAI2	Q96SN7	254 aa		31.94	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	ROBO1	Q9Y6N7	1651 aa		31.93	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	ACE	P12821	1306 aa		31.93	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	KIF20B	Q96Q89	1820 aa		31.92	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	NGDN	Q8NEJ9	315 aa	Known RBP	31.92	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	KTN1	Q86UP2	1357 aa	Known RBP	31.91	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	NHSL1	Q5SYE7	1610 aa		31.9	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	NSD3	Q9BZ95	1437 aa		31.9	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	TOM1	O60784	492 aa		31.89	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	ZNF692	Q9BU19	519 aa	Predicted RBP	31.89	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	USP6	P35125	1406 aa		31.89	■■■□□ 2.7
SMARCAL1-208	ENST00000434435	EDC4	Q6P2E9	1401 aa	Known RBP	31.87	■■■□□ 2.69
SMARCAL1-208	ENST00000434435	BRINP3	Q76B58	766 aa		31.86	■■■□□ 2.69
SMARCAL1-208	ENST00000434435	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.85	■■■□□ 2.69
SMARCAL1-208	ENST00000434435	ANKRD26	Q9UPS8	1709 aa		31.84	■■■□□ 2.69
SMARCAL1-208	ENST00000434435	CARD14	Q9BXL6	1004 aa		31.84	■■■□□ 2.69
SMARCAL1-208	ENST00000434435	UBAP1L	F5GYI3	381 aa		31.83	■■■□□ 2.69
SMARCAL1-208	ENST00000434435	KNSTRN	Q9Y448	316 aa		31.83	■■■□□ 2.69
SMARCAL1-208	ENST00000434435	BRD4	O60885	1362 aa	Predicted RBP	31.81	■■■□□ 2.68
SMARCAL1-208	ENST00000434435	NPHP3	Q7Z494	1330 aa		31.81	■■■□□ 2.68
SMARCAL1-208	ENST00000434435	PER1	O15534	1290 aa	Predicted RBP	31.81	■■■□□ 2.68
SMARCAL1-208	ENST00000434435	FOXO3	O43524	673 aa		31.81	■■■□□ 2.68
SMARCAL1-208	ENST00000434435	PSME1	Q06323	249 aa		31.79	■■■□□ 2.68
SMARCAL1-208	ENST00000434435	SSH2	Q76I76	1423 aa		31.79	■■■□□ 2.68
SMARCAL1-208	ENST00000434435	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.78	■■■□□ 2.68
SMARCAL1-208	ENST00000434435	DIEXF	Q68CQ4	756 aa	Known RBP	31.78	■■■□□ 2.68
SMARCAL1-208	ENST00000434435	PXDN	Q92626	1479 aa		31.77	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms