RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 Q3C1V9 767 aa10.46□□□□□ -0.73
PTPN4-205ENST00000433888 BARGINQ6ZT62 677 aa10.46□□□□□ -0.73
PTPN4-205ENST00000433888 MYT1Q01538 1121 aa10.45□□□□□ -0.74
PTPN4-205ENST00000433888 HOXA2O43364 376 aa10.44□□□□□ -0.74
PTPN4-205ENST00000433888 USB1Q9BQ65 265 aaKnown RBP10.43□□□□□ -0.74
PTPN4-205ENST00000433888 CD2BP2O95400 341 aaKnown RBP10.42□□□□□ -0.74
PTPN4-205ENST00000433888 PKDCCQ504Y2 493 aa10.42□□□□□ -0.74
PTPN4-205ENST00000433888 ZC3H15Q8WU90 426 aaKnown RBP10.42□□□□□ -0.74
PTPN4-205ENST00000433888 DXOO77932 396 aaKnown RBP10.41□□□□□ -0.74
PTPN4-205ENST00000433888 GUCA2AQ02747 115 aa10.4□□□□□ -0.74
PTPN4-205ENST00000433888 FOXC1Q12948 553 aa10.4□□□□□ -0.74
PTPN4-205ENST00000433888 KRI1Q8N9T8 703 aaKnown RBP10.39□□□□□ -0.75
PTPN4-205ENST00000433888 TOR4AQ9NXH8 423 aa10.39□□□□□ -0.75
PTPN4-205ENST00000433888 FAM187AA6NFU0 413 aa10.38□□□□□ -0.75
PTPN4-205ENST00000433888 SSTR3P32745 418 aaPredicted RBP10.38□□□□□ -0.75
PTPN4-205ENST00000433888 AMHR2Q16671 573 aa10.38□□□□□ -0.75
PTPN4-205ENST00000433888 ZNF787Q6DD87 383 aa10.38□□□□□ -0.75
PTPN4-205ENST00000433888 SYMPKQ92797 1274 aaKnown RBP10.37□□□□□ -0.75
PTPN4-205ENST00000433888 ZBTB24O43167 697 aaPredicted RBP10.35□□□□□ -0.75
PTPN4-205ENST00000433888 NUTM1Q86Y26 1132 aa10.35□□□□□ -0.75
PTPN4-205ENST00000433888 PCDHGC3Q9UN70 934 aa10.35□□□□□ -0.75
PTPN4-205ENST00000433888 TRIM32Q13049 653 aa10.33□□□□□ -0.76
PTPN4-205ENST00000433888 SPIRE2Q8WWL2 714 aa10.33□□□□□ -0.76
PTPN4-205ENST00000433888 AAASQ9NRG9 546 aa10.33□□□□□ -0.76
PTPN4-205ENST00000433888 POTECB2RU33 542 aa10.32□□□□□ -0.76
PTPN4-205ENST00000433888 WNT7AO00755 349 aa10.32□□□□□ -0.76
PTPN4-205ENST00000433888 AVPP01185 164 aa10.32□□□□□ -0.76
PTPN4-205ENST00000433888 ST8SIA5O15466 376 aa10.31□□□□□ -0.76
PTPN4-205ENST00000433888 FDX1P10109 184 aa10.31□□□□□ -0.76
PTPN4-205ENST00000433888 JUNDP17535 347 aa10.31□□□□□ -0.76
PTPN4-205ENST00000433888 GIGYF2Q6Y7W6 1299 aaKnown RBP10.31□□□□□ -0.76
PTPN4-205ENST00000433888 RETREG3Q86VR2 466 aa10.31□□□□□ -0.76
PTPN4-205ENST00000433888 CRIPAKQ8N1N5 446 aa10.31□□□□□ -0.76
PTPN4-205ENST00000433888 CYP4X1Q8N118 509 aa10.3□□□□□ -0.76
PTPN4-205ENST00000433888 MOXD2PA6NHM9 499 aa10.29□□□□□ -0.76
PTPN4-205ENST00000433888 NDUFV2P19404 249 aa10.29□□□□□ -0.76
PTPN4-205ENST00000433888 TTLL12Q14166 644 aaPredicted RBP10.29□□□□□ -0.76
PTPN4-205ENST00000433888 CCDC24Q8N4L8 307 aa10.29□□□□□ -0.76
PTPN4-205ENST00000433888 TRIM66O15016 1216 aa10.28□□□□□ -0.76
PTPN4-205ENST00000433888 SKOR1P84550 965 aa10.28□□□□□ -0.76
PTPN4-205ENST00000433888 PTCRAQ6ISU1 281 aaPredicted RBP10.27□□□□□ -0.77
PTPN4-205ENST00000433888 PARP9Q8IXQ6 854 aa10.27□□□□□ -0.77
PTPN4-205ENST00000433888 ZNF775Q96BV0 537 aaPredicted RBP10.27□□□□□ -0.77
PTPN4-205ENST00000433888 MRGPRX2Q96LB1 330 aa10.27□□□□□ -0.77
PTPN4-205ENST00000433888 DACH1Q9UI36 760 aa10.27□□□□□ -0.77
PTPN4-205ENST00000433888 SMPD1P17405 629 aa10.26□□□□□ -0.77
PTPN4-205ENST00000433888 SNIP1Q8TAD8 396 aaKnown RBP10.26□□□□□ -0.77
PTPN4-205ENST00000433888 SMCPP49901 116 aaPredicted RBP10.25□□□□□ -0.77
PTPN4-205ENST00000433888 AK7Q96M32 723 aa10.25□□□□□ -0.77
PTPN4-205ENST00000433888 BEGAINQ9BUH8 593 aa10.25□□□□□ -0.77
PTPN4-205ENST00000433888 C6orf229H3BNL8 230 aa10.24□□□□□ -0.77
PTPN4-205ENST00000433888 MS4A1P11836 297 aa10.24□□□□□ -0.77
PTPN4-205ENST00000433888 WNT7BP56706 349 aa10.24□□□□□ -0.77
PTPN4-205ENST00000433888 NUDT12Q9BQG2 462 aa10.24□□□□□ -0.77
PTPN4-205ENST00000433888 TTC24A2A3L6 582 aaPredicted RBP10.23□□□□□ -0.77
PTPN4-205ENST00000433888 RC3H1Q5TC82 1133 aaKnown RBP10.23□□□□□ -0.77
PTPN4-205ENST00000433888 GJA5P36382 358 aa10.22□□□□□ -0.77
PTPN4-205ENST00000433888 CTC1Q2NKJ3 1217 aa10.22□□□□□ -0.77
PTPN4-205ENST00000433888 J3QL48 77 aa10.21□□□□□ -0.77
PTPN4-205ENST00000433888 TBC1D2Q9BYX2 928 aa10.21□□□□□ -0.77
PTPN4-205ENST00000433888 AXIN1O15169 862 aa10.2□□□□□ -0.78
PTPN4-205ENST00000433888 SIAH2O43255 324 aa10.19□□□□□ -0.78
PTPN4-205ENST00000433888 PTPRNQ16849 979 aa10.19□□□□□ -0.78
PTPN4-205ENST00000433888 DESI1Q6ICB0 168 aa10.19□□□□□ -0.78
PTPN4-205ENST00000433888 RSBN1LQ6PCB5 846 aaPredicted RBP10.19□□□□□ -0.78
PTPN4-205ENST00000433888 PRR7Q8TB68 274 aa10.19□□□□□ -0.78
PTPN4-205ENST00000433888 EVA1BQ9NVM1 165 aa10.19□□□□□ -0.78
PTPN4-205ENST00000433888 CCNYL3P0C7X3 344 aa10.18□□□□□ -0.78
PTPN4-205ENST00000433888 MTMR2Q13614 643 aa10.18□□□□□ -0.78
PTPN4-205ENST00000433888 PCDHB15Q9Y5E8 787 aa10.18□□□□□ -0.78
PTPN4-205ENST00000433888 SPDYE5A6NIY4 337 aa10.17□□□□□ -0.78
PTPN4-205ENST00000433888 SPTLC1O15269 473 aa10.17□□□□□ -0.78
PTPN4-205ENST00000433888 DIXDC1Q155Q3 683 aa10.17□□□□□ -0.78
PTPN4-205ENST00000433888 PDE4DQ08499 809 aa10.16□□□□□ -0.78
PTPN4-205ENST00000433888 HPS1Q92902 700 aa10.16□□□□□ -0.78
PTPN4-205ENST00000433888 GMPR2Q9P2T1 348 aaKnown RBP10.16□□□□□ -0.78
PTPN4-205ENST00000433888 SH3BP2P78314 561 aa10.15□□□□□ -0.78
PTPN4-205ENST00000433888 KCNH2Q12809 1159 aa10.15□□□□□ -0.78
PTPN4-205ENST00000433888 HRCP23327 699 aa10.14□□□□□ -0.79
PTPN4-205ENST00000433888 SLC24A3Q9HC58 644 aa10.14□□□□□ -0.79
PTPN4-205ENST00000433888 LYPD8Q6UX82 237 aa10.13□□□□□ -0.79
PTPN4-205ENST00000433888 RIC3Q7Z5B4 369 aa10.13□□□□□ -0.79
PTPN4-205ENST00000433888 UNC93B1Q9H1C4 597 aa10.13□□□□□ -0.79
PTPN4-205ENST00000433888 CFAP99D6REC4 459 aa10.12□□□□□ -0.79
PTPN4-205ENST00000433888 LCE2AQ5TA79 106 aaPredicted RBP10.12□□□□□ -0.79
PTPN4-205ENST00000433888 PRPF38BQ5VTL8 546 aaKnown RBP10.11□□□□□ -0.79
PTPN4-205ENST00000433888 EHBP1Q8NDI1 1231 aa10.11□□□□□ -0.79
PTPN4-205ENST00000433888 BAP1Q92560 729 aa10.11□□□□□ -0.79
PTPN4-205ENST00000433888 ALDH1A1P00352 501 aa10.1□□□□□ -0.79
PTPN4-205ENST00000433888 ATP13A2Q9NQ11 1180 aa10.1□□□□□ -0.79
PTPN4-205ENST00000433888 MYSM1Q5VVJ2 828 aa10.09□□□□□ -0.79
PTPN4-205ENST00000433888 ZBTB3Q9H5J0 574 aa10.09□□□□□ -0.79
PTPN4-205ENST00000433888 LIMD1Q9UGP4 676 aa10.09□□□□□ -0.79
PTPN4-205ENST00000433888 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
PTPN4-205ENST00000433888 TUSC1Q2TAM9 212 aa10.08□□□□□ -0.8
PTPN4-205ENST00000433888 LINC01559Q495D7 138 aa10.08□□□□□ -0.8
PTPN4-205ENST00000433888 CABLES1Q8TDN4 633 aa10.08□□□□□ -0.8
PTPN4-205ENST00000433888 F12P00748 615 aaPredicted RBP10.07□□□□□ -0.8
PTPN4-205ENST00000433888 TREML4Q6UXN2 200 aa10.07□□□□□ -0.8
PTPN4-205ENST00000433888 ZNF511Q8NB15 262 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms