RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 SLAIN2Q9P270 581 aa27.39■■□□□ 1.98
RPUSD3-207ENST00000433555 ATF3P18847 181 aa27.38■■□□□ 1.97
RPUSD3-207ENST00000433555 COL16A1Q07092 1604 aaPredicted RBP27.37■■□□□ 1.97
RPUSD3-207ENST00000433555 NHSL1Q5SYE7 1610 aa27.37■■□□□ 1.97
RPUSD3-207ENST00000433555 ADGRB2O60241 1585 aa27.36■■□□□ 1.97
RPUSD3-207ENST00000433555 AHDC1Q5TGY3 1603 aaPredicted RBP27.36■■□□□ 1.97
RPUSD3-207ENST00000433555 C1orf167Q5SNV9 1468 aa27.32■■□□□ 1.96
RPUSD3-207ENST00000433555 RGPD8O14715 1765 aaPredicted RBP27.32■■□□□ 1.96
RPUSD3-207ENST00000433555 PRAM1Q96QH2 718 aa27.31■■□□□ 1.96
RPUSD3-207ENST00000433555 TRAK1Q9UPV9 953 aa27.31■■□□□ 1.96
RPUSD3-207ENST00000433555 NBPF1Q3BBV0 1214 aa27.3■■□□□ 1.96
RPUSD3-207ENST00000433555 SIRT1Q96EB6 747 aa27.3■■□□□ 1.96
RPUSD3-207ENST00000433555 TONSLQ96HA7 1378 aa27.29■■□□□ 1.96
RPUSD3-207ENST00000433555 USP32Q8NFA0 1604 aa27.29■■□□□ 1.96
RPUSD3-207ENST00000433555 BRINP3Q76B58 766 aa27.28■■□□□ 1.96
RPUSD3-207ENST00000433555 SAFB2Q14151 953 aaKnown RBP eCLIP27.27■■□□□ 1.96
RPUSD3-207ENST00000433555 QRICH2Q9H0J4 1663 aa27.25■■□□□ 1.95
RPUSD3-207ENST00000433555 NBPF8Q3BBV2 869 aa27.25■■□□□ 1.95
RPUSD3-207ENST00000433555 MED1Q15648 1581 aaPredicted RBP27.24■■□□□ 1.95
RPUSD3-207ENST00000433555 RALGAPBQ86X10 1494 aa27.21■■□□□ 1.95
RPUSD3-207ENST00000433555 POGKQ9P215 609 aa27.21■■□□□ 1.95
RPUSD3-207ENST00000433555 KIF1AQ12756 1690 aa27.2■■□□□ 1.94
RPUSD3-207ENST00000433555 SHPRHQ149N8 1683 aa27.2■■□□□ 1.94
RPUSD3-207ENST00000433555 ORAI2Q96SN7 254 aa27.19■■□□□ 1.94
RPUSD3-207ENST00000433555 NUTM2FA1L443 756 aa27.18■■□□□ 1.94
RPUSD3-207ENST00000433555 MINK1Q8N4C8 1332 aaPredicted RBP27.17■■□□□ 1.94
RPUSD3-207ENST00000433555 DDX17Q92841 729 aaKnown RBP27.17■■□□□ 1.94
RPUSD3-207ENST00000433555 ROCK2O75116 1388 aaKnown RBP27.17■■□□□ 1.94
RPUSD3-207ENST00000433555 HIRIP3Q9BW71 556 aaPredicted RBP27.16■■□□□ 1.94
RPUSD3-207ENST00000433555 GPRASP1Q5JY77 1395 aa27.16■■□□□ 1.94
RPUSD3-207ENST00000433555 TULP4Q9NRJ4 1543 aa27.16■■□□□ 1.94
RPUSD3-207ENST00000433555 CLSPNQ9HAW4 1339 aa27.15■■□□□ 1.94
RPUSD3-207ENST00000433555 TOPAZ1Q8N9V7 1692 aa27.14■■□□□ 1.93
RPUSD3-207ENST00000433555 ITSN1Q15811 1721 aa27.13■■□□□ 1.93
RPUSD3-207ENST00000433555 ANKARQ7Z5J8 1434 aa27.11■■□□□ 1.93
RPUSD3-207ENST00000433555 PXDNQ92626 1479 aa27.11■■□□□ 1.93
RPUSD3-207ENST00000433555 ATP7BP35670 1465 aa27.1■■□□□ 1.93
RPUSD3-207ENST00000433555 PRR36Q9H6K5 1346 aa27.09■■□□□ 1.93
RPUSD3-207ENST00000433555 JCADQ9P266 1359 aa27.09■■□□□ 1.93
RPUSD3-207ENST00000433555 ESCO1Q5FWF5 840 aa27.08■■□□□ 1.93
RPUSD3-207ENST00000433555 CCER1Q8TC90 406 aaPredicted RBP27.07■■□□□ 1.92
RPUSD3-207ENST00000433555 CENPJQ9HC77 1338 aaPredicted RBP27.07■■□□□ 1.92
RPUSD3-207ENST00000433555 LRP6O75581 1613 aa27.06■■□□□ 1.92
RPUSD3-207ENST00000433555 WASLO00401 505 aaPredicted RBP27.05■■□□□ 1.92
RPUSD3-207ENST00000433555 SOS2Q07890 1332 aaPredicted RBP27.04■■□□□ 1.92
RPUSD3-207ENST00000433555 COL22A1Q8NFW1 1626 aaPredicted RBP27.03■■□□□ 1.92
RPUSD3-207ENST00000433555 TRPM3Q9HCF6 1732 aaPredicted RBP27.02■■□□□ 1.92
RPUSD3-207ENST00000433555 EIF3AQ14152 1382 aaKnown RBP27.02■■□□□ 1.92
RPUSD3-207ENST00000433555 PNPLA6Q8IY17 1366 aa27.01■■□□□ 1.91
RPUSD3-207ENST00000433555 DISP3Q9P2K9 1392 aa27■■□□□ 1.91
RPUSD3-207ENST00000433555 XPCQ01831 940 aaPredicted RBP27■■□□□ 1.91
RPUSD3-207ENST00000433555 NPHP3Q7Z494 1330 aa26.99■■□□□ 1.91
RPUSD3-207ENST00000433555 FOXO3O43524 673 aa26.98■■□□□ 1.91
RPUSD3-207ENST00000433555 CARD11Q9BXL7 1154 aa26.98■■□□□ 1.91
RPUSD3-207ENST00000433555 PHF8Q9UPP1 1060 aa26.98■■□□□ 1.91
RPUSD3-207ENST00000433555 CDK19Q9BWU1 502 aa26.97■■□□□ 1.91
RPUSD3-207ENST00000433555 ABCA3Q99758 1704 aa26.95■■□□□ 1.9
RPUSD3-207ENST00000433555 PMFBP1Q8TBY8 1022 aa26.94■■□□□ 1.9
RPUSD3-207ENST00000433555 ALS2Q96Q42 1657 aa26.94■■□□□ 1.9
RPUSD3-207ENST00000433555 LRRC59Q96AG4 307 aaKnown RBP26.93■■□□□ 1.9
RPUSD3-207ENST00000433555 NUDT16Q96DE0 195 aaKnown RBP26.92■■□□□ 1.9
RPUSD3-207ENST00000433555 TIMELESSQ9UNS1 1208 aa26.92■■□□□ 1.9
RPUSD3-207ENST00000433555 SPATA31A6Q5VVP1 1343 aa26.91■■□□□ 1.9
RPUSD3-207ENST00000433555 SBNO2Q9Y2G9 1366 aa26.91■■□□□ 1.9
RPUSD3-207ENST00000433555 MARF1Q9Y4F3 1742 aaKnown RBP26.9■■□□□ 1.9
RPUSD3-207ENST00000433555 TNS3Q68CZ2 1445 aa26.9■■□□□ 1.9
RPUSD3-207ENST00000433555 CRYBG1Q9Y4K1 1723 aa26.88■■□□□ 1.89
RPUSD3-207ENST00000433555 CABP2Q9NPB3 220 aa26.88■■□□□ 1.89
RPUSD3-207ENST00000433555 KRT28Q7Z3Y7 464 aa26.87■■□□□ 1.89
RPUSD3-207ENST00000433555 SRPK2P78362 688 aaKnown RBP26.86■■□□□ 1.89
RPUSD3-207ENST00000433555 PPIP5K1Q6PFW1 1433 aa26.86■■□□□ 1.89
RPUSD3-207ENST00000433555 AKAP12Q02952 1782 aa26.86■■□□□ 1.89
RPUSD3-207ENST00000433555 SPATA31A3Q5VYP0 1347 aa26.86■■□□□ 1.89
RPUSD3-207ENST00000433555 SBNO1A3KN83 1393 aa26.84■■□□□ 1.89
RPUSD3-207ENST00000433555 POLR3AO14802 1390 aaPredicted RBP26.84■■□□□ 1.89
RPUSD3-207ENST00000433555 USP47Q96K76 1375 aa26.84■■□□□ 1.89
RPUSD3-207ENST00000433555 NUTM2BA6NNL0 878 aaPredicted RBP26.84■■□□□ 1.89
RPUSD3-207ENST00000433555 NUTM2EB1AL46 878 aaPredicted RBP26.84■■□□□ 1.89
RPUSD3-207ENST00000433555 NUTM2AQ8IVF1 878 aaPredicted RBP26.84■■□□□ 1.89
RPUSD3-207ENST00000433555 EVC2Q86UK5 1308 aa26.84■■□□□ 1.89
RPUSD3-207ENST00000433555 RGS17Q9UGC6 210 aaPredicted RBP26.82■■□□□ 1.88
RPUSD3-207ENST00000433555 PHF23Q9BUL5 403 aaPredicted RBP26.81■■□□□ 1.88
RPUSD3-207ENST00000433555 CCDC61Q9Y6R9 512 aa26.81■■□□□ 1.88
RPUSD3-207ENST00000433555 NRKQ7Z2Y5 1582 aa26.8■■□□□ 1.88
RPUSD3-207ENST00000433555 PSME1Q06323 249 aa26.79■■□□□ 1.88
RPUSD3-207ENST00000433555 NGDNQ8NEJ9 315 aaKnown RBP26.79■■□□□ 1.88
RPUSD3-207ENST00000433555 TESK2Q96S53 571 aa26.79■■□□□ 1.88
RPUSD3-207ENST00000433555 ST20-MTHFSA0A0A6YYL1 179 aa26.78■■□□□ 1.88
RPUSD3-207ENST00000433555 PLEKHG3A1L390 1219 aa26.78■■□□□ 1.88
RPUSD3-207ENST00000433555 ACEP12821 1306 aa26.78■■□□□ 1.88
RPUSD3-207ENST00000433555 PHRF1Q9P1Y6 1649 aaKnown RBP26.78■■□□□ 1.88
RPUSD3-207ENST00000433555 MON2Q7Z3U7 1717 aa26.78■■□□□ 1.88
RPUSD3-207ENST00000433555 ILDR2Q71H61 639 aa26.76■■□□□ 1.87
RPUSD3-207ENST00000433555 MEX3CQ5U5Q3 659 aaKnown RBP26.75■■□□□ 1.87
RPUSD3-207ENST00000433555 ARHGEF10O15013 1369 aa26.74■■□□□ 1.87
RPUSD3-207ENST00000433555 ATAD2Q6PL18 1390 aa26.73■■□□□ 1.87
RPUSD3-207ENST00000433555 CABP1Q9NZU7 370 aa26.72■■□□□ 1.87
RPUSD3-207ENST00000433555 PIK3C2AO00443 1686 aa26.72■■□□□ 1.87
RPUSD3-207ENST00000433555 PLCH1Q4KWH8 1693 aa26.72■■□□□ 1.87
RPUSD3-207ENST00000433555 USP6P35125 1406 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 188.9 ms