RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 NOL10Q9BSC4 688 aaKnown RBP13.39□□□□□ -0.27
CCDC171-202ENST00000432954 PAXBP1Q9Y5B6 917 aa13.39□□□□□ -0.27
CCDC171-202ENST00000432954 UVSSAQ2YD98 709 aa13.38□□□□□ -0.27
CCDC171-202ENST00000432954 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.38□□□□□ -0.27
CCDC171-202ENST00000432954 IPO7O95373 1038 aaKnown RBP13.38□□□□□ -0.27
CCDC171-202ENST00000432954 POLD1P28340 1107 aa13.38□□□□□ -0.27
CCDC171-202ENST00000432954 MSL3Q8N5Y2 521 aaKnown RBP13.38□□□□□ -0.27
CCDC171-202ENST00000432954 GZF1Q9H116 711 aaPredicted RBP13.38□□□□□ -0.27
CCDC171-202ENST00000432954 ZKSCAN5Q9Y2L8 839 aa13.38□□□□□ -0.27
CCDC171-202ENST00000432954 IBTKQ9P2D0 1353 aaPredicted RBP13.37□□□□□ -0.27
CCDC171-202ENST00000432954 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
CCDC171-202ENST00000432954 CCDC91Q7Z6B0 441 aa13.37□□□□□ -0.27
CCDC171-202ENST00000432954 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
CCDC171-202ENST00000432954 SDR16C5Q8N3Y7 309 aa13.37□□□□□ -0.27
CCDC171-202ENST00000432954 ANKRD33BA6NCL7 494 aa13.36□□□□□ -0.27
CCDC171-202ENST00000432954 FOXD4L6Q3SYB3 417 aaPredicted RBP13.36□□□□□ -0.27
CCDC171-202ENST00000432954 SPTY2D1Q68D10 685 aaPredicted RBP13.36□□□□□ -0.27
CCDC171-202ENST00000432954 FOXD4L3Q6VB84 417 aaPredicted RBP13.36□□□□□ -0.27
CCDC171-202ENST00000432954 ANKRD7Q92527 254 aa13.36□□□□□ -0.27
CCDC171-202ENST00000432954 TNPO1Q92973 898 aaKnown RBP13.36□□□□□ -0.27
CCDC171-202ENST00000432954 WDR97A6NE52 1622 aa13.36□□□□□ -0.27
CCDC171-202ENST00000432954 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
CCDC171-202ENST00000432954 SCP2P22307 547 aa13.35□□□□□ -0.27
CCDC171-202ENST00000432954 CASQ1P31415 396 aa13.35□□□□□ -0.27
CCDC171-202ENST00000432954 SCAPERQ9BY12 1400 aa13.35□□□□□ -0.27
CCDC171-202ENST00000432954 ANAPC4Q9UJX5 808 aa13.35□□□□□ -0.27
CCDC171-202ENST00000432954 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
CCDC171-202ENST00000432954 DDX46Q7L014 1031 aaKnown RBP13.34□□□□□ -0.27
CCDC171-202ENST00000432954 RPAINQ86UA6 219 aa13.34□□□□□ -0.27
CCDC171-202ENST00000432954 NUCKS1Q9H1E3 243 aaKnown RBP13.34□□□□□ -0.27
CCDC171-202ENST00000432954 NEFHP12036 1026 aa13.34□□□□□ -0.27
CCDC171-202ENST00000432954 TBC1D22AQ8WUA7 517 aa13.34□□□□□ -0.27
CCDC171-202ENST00000432954 SMC3Q9UQE7 1217 aa13.34□□□□□ -0.27
CCDC171-202ENST00000432954 CCDC196A0A1B0GTZ2 297 aa13.33□□□□□ -0.28
CCDC171-202ENST00000432954 U2AF2P26368 475 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCDC171-202ENST00000432954 NUB1Q9Y5A7 615 aa13.33□□□□□ -0.28
CCDC171-202ENST00000432954 CUX2O14529 1486 aa13.33□□□□□ -0.28
CCDC171-202ENST00000432954 ZNF428Q96B54 188 aa13.32□□□□□ -0.28
CCDC171-202ENST00000432954 CCT2P78371 535 aaKnown RBP13.32□□□□□ -0.28
CCDC171-202ENST00000432954 PDLIM2Q96JY6 352 aa13.32□□□□□ -0.28
CCDC171-202ENST00000432954 JRKLQ9Y4A0 524 aa13.32□□□□□ -0.28
CCDC171-202ENST00000432954 PAX7P23759 505 aa13.31□□□□□ -0.28
CCDC171-202ENST00000432954 NASPP49321 788 aaPredicted RBP13.31□□□□□ -0.28
CCDC171-202ENST00000432954 C8orf34Q49A92 452 aa13.31□□□□□ -0.28
CCDC171-202ENST00000432954 MAP9Q49MG5 647 aa13.31□□□□□ -0.28
CCDC171-202ENST00000432954 GAS2L3Q86XJ1 694 aa13.31□□□□□ -0.28
CCDC171-202ENST00000432954 GOLGA6L6A8MZA4 724 aa13.31□□□□□ -0.28
CCDC171-202ENST00000432954 TPM3P06753 285 aa13.31□□□□□ -0.28
CCDC171-202ENST00000432954 KDM4CQ9H3R0 1056 aa13.31□□□□□ -0.28
CCDC171-202ENST00000432954 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
CCDC171-202ENST00000432954 MORC2Q9Y6X9 1032 aaPredicted RBP13.31□□□□□ -0.28
CCDC171-202ENST00000432954 H0YHG0 523 aa13.3□□□□□ -0.28
CCDC171-202ENST00000432954 ATP2B1P20020 1258 aa13.3□□□□□ -0.28
CCDC171-202ENST00000432954 SARNPP82979 210 aaKnown RBP13.3□□□□□ -0.28
CCDC171-202ENST00000432954 CCDC97Q96F63 343 aaPredicted RBP13.3□□□□□ -0.28
CCDC171-202ENST00000432954 DDX49Q9Y6V7 483 aaKnown RBP13.3□□□□□ -0.28
CCDC171-202ENST00000432954 GOLGA6CA6NDK9 693 aa13.3□□□□□ -0.28
CCDC171-202ENST00000432954 GOLGA6BA6NDN3 693 aa13.3□□□□□ -0.28
CCDC171-202ENST00000432954 GOLGA6DP0CG33 693 aa13.3□□□□□ -0.28
CCDC171-202ENST00000432954 TNNT1P13805 278 aa13.3□□□□□ -0.28
CCDC171-202ENST00000432954 ZRSR2Q15696 482 aaKnown RBP13.3□□□□□ -0.28
CCDC171-202ENST00000432954 MUM1L1Q5H9M0 696 aa13.3□□□□□ -0.28
CCDC171-202ENST00000432954 ERCC4Q92889 916 aaPredicted RBP13.3□□□□□ -0.28
CCDC171-202ENST00000432954 GOLGA6AQ9NYA3 693 aa13.3□□□□□ -0.28
CCDC171-202ENST00000432954 ATP6V1AP38606 617 aa13.29□□□□□ -0.28
CCDC171-202ENST00000432954 CHAF1AQ13111 956 aaPredicted RBP13.29□□□□□ -0.28
CCDC171-202ENST00000432954 FAM184AQ8NB25 1140 aa13.29□□□□□ -0.28
CCDC171-202ENST00000432954 SUDS3Q9H7L9 328 aaPredicted RBP13.29□□□□□ -0.28
CCDC171-202ENST00000432954 REC8O95072 547 aa13.28□□□□□ -0.28
CCDC171-202ENST00000432954 HNRNPH2P55795 449 aaKnown RBP13.28□□□□□ -0.28
CCDC171-202ENST00000432954 TMX1Q9H3N1 280 aa13.28□□□□□ -0.28
CCDC171-202ENST00000432954 DDX41Q9UJV9 622 aaKnown RBP13.28□□□□□ -0.28
CCDC171-202ENST00000432954 BAZ1AQ9NRL2 1556 aaPredicted RBP13.28□□□□□ -0.28
CCDC171-202ENST00000432954 CD151P48509 253 aa13.28□□□□□ -0.28
CCDC171-202ENST00000432954 TSGA10IPQ3SY00 556 aa13.28□□□□□ -0.28
CCDC171-202ENST00000432954 TOMM22Q9NS69 142 aa13.28□□□□□ -0.28
CCDC171-202ENST00000432954 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.28
CCDC171-202ENST00000432954 INHBEP58166 350 aa13.27□□□□□ -0.28
CCDC171-202ENST00000432954 PPP2R5AQ15172 486 aa13.27□□□□□ -0.28
CCDC171-202ENST00000432954 GOLGA6L1Q8N7Z2 621 aa13.27□□□□□ -0.28
CCDC171-202ENST00000432954 TEX13AQ9BXU3 409 aaPredicted RBP13.27□□□□□ -0.28
CCDC171-202ENST00000432954 ZSCAN26Q16670 478 aa13.27□□□□□ -0.29
CCDC171-202ENST00000432954 PIK3R5Q8WYR1 880 aa13.27□□□□□ -0.29
CCDC171-202ENST00000432954 DEF6Q9H4E7 631 aa13.27□□□□□ -0.29
CCDC171-202ENST00000432954 CYP2C19P33261 490 aa13.26□□□□□ -0.29
CCDC171-202ENST00000432954 RBM5P52756 815 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC171-202ENST00000432954 SKOR2Q2VWA4 1001 aaPredicted RBP13.26□□□□□ -0.29
CCDC171-202ENST00000432954 KTN1Q86UP2 1357 aaKnown RBP13.26□□□□□ -0.29
CCDC171-202ENST00000432954 GOLGA6L22H0YM25 854 aa13.25□□□□□ -0.29
CCDC171-202ENST00000432954 FBLN2P98095 1184 aa13.25□□□□□ -0.29
CCDC171-202ENST00000432954 SYCP1Q15431 976 aa13.25□□□□□ -0.29
CCDC171-202ENST00000432954 RAD54L2Q9Y4B4 1467 aa13.25□□□□□ -0.29
CCDC171-202ENST00000432954 SLKQ9H2G2 1235 aaPredicted RBP13.25□□□□□ -0.29
CCDC171-202ENST00000432954 ANKRD18BA2A2Z9 1011 aa13.24□□□□□ -0.29
CCDC171-202ENST00000432954 SUGP1Q8IWZ8 645 aaKnown RBP13.24□□□□□ -0.29
CCDC171-202ENST00000432954 FAM212AQ96EL1 285 aa13.24□□□□□ -0.29
CCDC171-202ENST00000432954 TRERF1Q96PN7 1200 aa13.24□□□□□ -0.29
CCDC171-202ENST00000432954 CTNNA3Q9UI47 895 aa13.24□□□□□ -0.29
CCDC171-202ENST00000432954 DRC1Q96MC2 740 aa13.24□□□□□ -0.29
CCDC171-202ENST00000432954 CCDC39Q9UFE4 941 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms