RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 AGLP35573 1532 aa11.09□□□□□ -0.63
HDAC9-212ENST00000432645 CDCA7LQ96GN5 454 aa11.08□□□□□ -0.64
HDAC9-212ENST00000432645 RBM19Q9Y4C8 960 aaKnown RBP11.08□□□□□ -0.64
HDAC9-212ENST00000432645 EVC2Q86UK5 1308 aa11.08□□□□□ -0.64
HDAC9-212ENST00000432645 MINK1Q8N4C8 1332 aaPredicted RBP11.08□□□□□ -0.64
HDAC9-212ENST00000432645 PRAM1Q96QH2 718 aa11.08□□□□□ -0.64
HDAC9-212ENST00000432645 QRICH2Q9H0J4 1663 aa11.08□□□□□ -0.64
HDAC9-212ENST00000432645 SRPK2P78362 688 aaKnown RBP11.07□□□□□ -0.64
HDAC9-212ENST00000432645 POGKQ9P215 609 aa11.07□□□□□ -0.64
HDAC9-212ENST00000432645 MYO3AQ8NEV4 1616 aa11.07□□□□□ -0.64
HDAC9-212ENST00000432645 REREQ9P2R6 1566 aa11.07□□□□□ -0.64
HDAC9-212ENST00000432645 ZMYM3Q14202 1370 aa11.07□□□□□ -0.64
HDAC9-212ENST00000432645 NSD3Q9BZ95 1437 aa11.07□□□□□ -0.64
HDAC9-212ENST00000432645 ZFYVE9O95405 1425 aa11.06□□□□□ -0.64
HDAC9-212ENST00000432645 ARHGEF40Q8TER5 1519 aa11.06□□□□□ -0.64
HDAC9-212ENST00000432645 TRHP20396 242 aaPredicted RBP11.05□□□□□ -0.64
HDAC9-212ENST00000432645 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
HDAC9-212ENST00000432645 NPC1L1Q9UHC9 1359 aa11.05□□□□□ -0.64
HDAC9-212ENST00000432645 MORC1Q86VD1 984 aa11.05□□□□□ -0.64
HDAC9-212ENST00000432645 A2ML1A8K2U0 1454 aa11.04□□□□□ -0.64
HDAC9-212ENST00000432645 B4GALNT3Q6L9W6 998 aa11.04□□□□□ -0.64
HDAC9-212ENST00000432645 WAPLQ7Z5K2 1190 aa11.04□□□□□ -0.64
HDAC9-212ENST00000432645 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
HDAC9-212ENST00000432645 YTHDC2Q9H6S0 1430 aaKnown RBP11.04□□□□□ -0.64
HDAC9-212ENST00000432645 TULP4Q9NRJ4 1543 aa11.03□□□□□ -0.64
HDAC9-212ENST00000432645 CEBPAP49715 358 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-212ENST00000432645 ARHGEF28Q8N1W1 1705 aaKnown RBP11.03□□□□□ -0.64
HDAC9-212ENST00000432645 BLMP54132 1417 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-212ENST00000432645 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
HDAC9-212ENST00000432645 PPP4R2Q9NY27 417 aa11.03□□□□□ -0.64
HDAC9-212ENST00000432645 SPATA31D1Q6ZQQ2 1576 aa11.02□□□□□ -0.64
HDAC9-212ENST00000432645 ALKQ9UM73 1620 aa11.02□□□□□ -0.65
HDAC9-212ENST00000432645 CGNL1Q0VF96 1302 aa11.01□□□□□ -0.65
HDAC9-212ENST00000432645 PTPRMP28827 1452 aa11.01□□□□□ -0.65
HDAC9-212ENST00000432645 MSH5O43196 834 aa11.01□□□□□ -0.65
HDAC9-212ENST00000432645 RCAN3Q9UKA8 241 aa11.01□□□□□ -0.65
HDAC9-212ENST00000432645 PDE3BQ13370 1112 aa11□□□□□ -0.65
HDAC9-212ENST00000432645 CDK19Q9BWU1 502 aa11□□□□□ -0.65
HDAC9-212ENST00000432645 FGD1P98174 961 aa11□□□□□ -0.65
HDAC9-212ENST00000432645 ANKRD36BQ8N2N9 1353 aa10.99□□□□□ -0.65
HDAC9-212ENST00000432645 PLEKHH1Q9ULM0 1364 aa10.99□□□□□ -0.65
HDAC9-212ENST00000432645 APAF1O14727 1248 aa10.99□□□□□ -0.65
HDAC9-212ENST00000432645 TNRQ92752 1358 aa10.99□□□□□ -0.65
HDAC9-212ENST00000432645 RNF123Q5XPI4 1314 aa10.99□□□□□ -0.65
HDAC9-212ENST00000432645 MTHFSP49914 203 aa10.99□□□□□ -0.65
HDAC9-212ENST00000432645 TXNDC2Q86VQ3 553 aa10.99□□□□□ -0.65
HDAC9-212ENST00000432645 A0A1W2PP64 1363 aa10.98□□□□□ -0.65
HDAC9-212ENST00000432645 GGNBP2Q9H3C7 697 aa10.98□□□□□ -0.65
HDAC9-212ENST00000432645 CABP1Q9NZU7 370 aa10.98□□□□□ -0.65
HDAC9-212ENST00000432645 PUS7Q96PZ0 661 aaKnown RBP10.98□□□□□ -0.65
HDAC9-212ENST00000432645 METP08581 1390 aa10.98□□□□□ -0.65
HDAC9-212ENST00000432645 INSRP06213 1382 aa10.97□□□□□ -0.65
HDAC9-212ENST00000432645 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.97□□□□□ -0.65
HDAC9-212ENST00000432645 PLIN1O60240 522 aa10.97□□□□□ -0.65
HDAC9-212ENST00000432645 RRP1P56182 461 aaKnown RBP10.97□□□□□ -0.65
HDAC9-212ENST00000432645 NEUROD2Q15784 382 aa10.96□□□□□ -0.65
HDAC9-212ENST00000432645 TERF2IPQ9NYB0 399 aa10.96□□□□□ -0.66
HDAC9-212ENST00000432645 ATAD2Q6PL18 1390 aa10.95□□□□□ -0.66
HDAC9-212ENST00000432645 GOLGA2Q08379 1002 aa10.95□□□□□ -0.66
HDAC9-212ENST00000432645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.95□□□□□ -0.66
HDAC9-212ENST00000432645 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
HDAC9-212ENST00000432645 POLR3AO14802 1390 aaPredicted RBP10.95□□□□□ -0.66
HDAC9-212ENST00000432645 FYB1O15117 783 aa10.94□□□□□ -0.66
HDAC9-212ENST00000432645 LTKP29376 864 aa10.94□□□□□ -0.66
HDAC9-212ENST00000432645 RRP7AQ9Y3A4 280 aaKnown RBP10.94□□□□□ -0.66
HDAC9-212ENST00000432645 TMEM2Q9UHN6 1383 aa10.94□□□□□ -0.66
HDAC9-212ENST00000432645 HDGFL2Q7Z4V5 671 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-212ENST00000432645 SPINK5Q9NQ38 1064 aaPredicted RBP10.94□□□□□ -0.66
HDAC9-212ENST00000432645 NCKAP5LQ9HCH0 1330 aa10.94□□□□□ -0.66
HDAC9-212ENST00000432645 EXOC6Q8TAG9 804 aa10.93□□□□□ -0.66
HDAC9-212ENST00000432645 SLC26A8Q96RN1 970 aa10.93□□□□□ -0.66
HDAC9-212ENST00000432645 DUSP27Q5VZP5 1158 aa10.93□□□□□ -0.66
HDAC9-212ENST00000432645 ZNF521Q96K83 1311 aa10.93□□□□□ -0.66
HDAC9-212ENST00000432645 ABCC11Q96J66 1382 aa10.93□□□□□ -0.66
HDAC9-212ENST00000432645 FBLN1P23142 703 aa10.93□□□□□ -0.66
HDAC9-212ENST00000432645 CFAP53Q96M91 514 aa10.93□□□□□ -0.66
HDAC9-212ENST00000432645 DMRT2Q9Y5R5 561 aa10.93□□□□□ -0.66
HDAC9-212ENST00000432645 NINLQ9Y2I6 1382 aa10.92□□□□□ -0.66
HDAC9-212ENST00000432645 CD163L1Q9NR16 1453 aa10.92□□□□□ -0.66
HDAC9-212ENST00000432645 NUTM2FA1L443 756 aa10.91□□□□□ -0.66
HDAC9-212ENST00000432645 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-212ENST00000432645 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
HDAC9-212ENST00000432645 WASLO00401 505 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-212ENST00000432645 BCL11BQ9C0K0 894 aaPredicted RBP10.91□□□□□ -0.66
HDAC9-212ENST00000432645 NRXN3Q9Y4C0 1643 aa10.91□□□□□ -0.66
HDAC9-212ENST00000432645 U2SURPO15042 1029 aaKnown RBP10.9□□□□□ -0.66
HDAC9-212ENST00000432645 PPM1GO15355 546 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-212ENST00000432645 SLFN5Q08AF3 891 aa10.9□□□□□ -0.66
HDAC9-212ENST00000432645 NSD2O96028 1365 aa10.9□□□□□ -0.66
HDAC9-212ENST00000432645 DEKP35659 375 aaKnown RBP10.9□□□□□ -0.66
HDAC9-212ENST00000432645 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.67
HDAC9-212ENST00000432645 TCP11L2Q8N4U5 519 aa10.9□□□□□ -0.67
HDAC9-212ENST00000432645 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.9□□□□□ -0.67
HDAC9-212ENST00000432645 RUNDC1Q96C34 613 aa10.89□□□□□ -0.67
HDAC9-212ENST00000432645 SETD1AO15047 1707 aaKnown RBP10.89□□□□□ -0.67
HDAC9-212ENST00000432645 C20orf194Q5TEA3 1177 aa10.89□□□□□ -0.67
HDAC9-212ENST00000432645 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
HDAC9-212ENST00000432645 NUDT16Q96DE0 195 aaKnown RBP10.89□□□□□ -0.67
HDAC9-212ENST00000432645 EID1Q9Y6B2 187 aa10.89□□□□□ -0.67
HDAC9-212ENST00000432645 USP32Q8NFA0 1604 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms