RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 PSDA5PKW4 1024 aaPredicted RBP24.39■■□□□ 1.49
NUP50-209ENST00000432340 ESCO1Q5FWF5 840 aa24.39■■□□□ 1.49
NUP50-209ENST00000432340 KRT27Q7Z3Y8 459 aa24.37■■□□□ 1.49
NUP50-209ENST00000432340 NRXN3Q9Y4C0 1643 aa24.36■■□□□ 1.49
NUP50-209ENST00000432340 YY1P25490 414 aa24.36■■□□□ 1.49
NUP50-209ENST00000432340 NUP155O75694 1391 aa24.35■■□□□ 1.49
NUP50-209ENST00000432340 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
NUP50-209ENST00000432340 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
NUP50-209ENST00000432340 SLIT2O94813 1529 aa24.34■■□□□ 1.49
NUP50-209ENST00000432340 HFM1A2PYH4 1435 aa24.34■■□□□ 1.49
NUP50-209ENST00000432340 E9PCH4 1651 aa24.33■■□□□ 1.49
NUP50-209ENST00000432340 SPHKAPQ2M3C7 1700 aa24.32■■□□□ 1.48
NUP50-209ENST00000432340 FOXO3O43524 673 aa24.32■■□□□ 1.48
NUP50-209ENST00000432340 VPS72Q15906 364 aa24.32■■□□□ 1.48
NUP50-209ENST00000432340 ROBO2Q9HCK4 1378 aa24.31■■□□□ 1.48
NUP50-209ENST00000432340 VGFO15240 615 aaPredicted RBP24.31■■□□□ 1.48
NUP50-209ENST00000432340 ONECUT3O60422 494 aaPredicted RBP24.31■■□□□ 1.48
NUP50-209ENST00000432340 HAP1P54257 671 aaPredicted RBP24.31■■□□□ 1.48
NUP50-209ENST00000432340 CCDC9Q9Y3X0 531 aaKnown RBP24.31■■□□□ 1.48
NUP50-209ENST00000432340 DCAF8L1A6NGE4 600 aa24.3■■□□□ 1.48
NUP50-209ENST00000432340 PRAG1Q86YV5 1406 aa24.28■■□□□ 1.48
NUP50-209ENST00000432340 PXDNQ92626 1479 aa24.28■■□□□ 1.48
NUP50-209ENST00000432340 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.27■■□□□ 1.48
NUP50-209ENST00000432340 A0A0G2JS52 829 aa24.27■■□□□ 1.48
NUP50-209ENST00000432340 MYT1Q01538 1121 aa24.27■■□□□ 1.48
NUP50-209ENST00000432340 GLI3P10071 1580 aa24.27■■□□□ 1.48
NUP50-209ENST00000432340 XPCQ01831 940 aaPredicted RBP24.26■■□□□ 1.47
NUP50-209ENST00000432340 ROCK1Q13464 1354 aa24.26■■□□□ 1.47
NUP50-209ENST00000432340 R3HDM1Q15032 1099 aaKnown RBP24.24■■□□□ 1.47
NUP50-209ENST00000432340 SPATA31A3Q5VYP0 1347 aa24.23■■□□□ 1.47
NUP50-209ENST00000432340 CCDC144AA2RUR9 1427 aa24.2■■□□□ 1.46
NUP50-209ENST00000432340 EN1Q05925 392 aaPredicted RBP24.2■■□□□ 1.46
NUP50-209ENST00000432340 MARF1Q9Y4F3 1742 aaKnown RBP24.18■■□□□ 1.46
NUP50-209ENST00000432340 CDC42BPGQ6DT37 1551 aa24.18■■□□□ 1.46
NUP50-209ENST00000432340 PSME1Q06323 249 aa24.18■■□□□ 1.46
NUP50-209ENST00000432340 NEXMIFQ5QGS0 1516 aa24.18■■□□□ 1.46
NUP50-209ENST00000432340 RPGRIP1LQ68CZ1 1315 aa24.17■■□□□ 1.46
NUP50-209ENST00000432340 DISP2A7MBM2 1401 aa24.15■■□□□ 1.46
NUP50-209ENST00000432340 KRT28Q7Z3Y7 464 aa24.13■■□□□ 1.45
NUP50-209ENST00000432340 USP32Q8NFA0 1604 aa24.12■■□□□ 1.45
NUP50-209ENST00000432340 FAM98CQ17RN3 349 aaKnown RBP24.11■■□□□ 1.45
NUP50-209ENST00000432340 PARD3Q8TEW0 1356 aa24.11■■□□□ 1.45
NUP50-209ENST00000432340 NAIPQ13075 1403 aa24.1■■□□□ 1.45
NUP50-209ENST00000432340 ARHGEF10O15013 1369 aa24.09■■□□□ 1.45
NUP50-209ENST00000432340 PPP1R1BQ9UD71 204 aaPredicted RBP24.09■■□□□ 1.45
NUP50-209ENST00000432340 LOC105371045A0A1W2PR82 267 aa24.08■■□□□ 1.45
NUP50-209ENST00000432340 NUTM2FA1L443 756 aa24.08■■□□□ 1.45
NUP50-209ENST00000432340 TNS3Q68CZ2 1445 aa24.08■■□□□ 1.44
NUP50-209ENST00000432340 BRWD3Q6RI45 1802 aa24.07■■□□□ 1.44
NUP50-209ENST00000432340 NBPF8Q3BBV2 869 aa24.06■■□□□ 1.44
NUP50-209ENST00000432340 NBPF14Q5TI25 921 aa24.06■■□□□ 1.44
NUP50-209ENST00000432340 LMOD2Q6P5Q4 547 aa24.05■■□□□ 1.44
NUP50-209ENST00000432340 EZH2Q15910 746 aaKnown RBP24.04■■□□□ 1.44
NUP50-209ENST00000432340 CABLES1Q8TDN4 633 aa24.04■■□□□ 1.44
NUP50-209ENST00000432340 SBNO1A3KN83 1393 aa24.03■■□□□ 1.44
NUP50-209ENST00000432340 FAM196AQ6ZSG2 479 aa24.03■■□□□ 1.44
NUP50-209ENST00000432340 NINLQ9Y2I6 1382 aa24.03■■□□□ 1.44
NUP50-209ENST00000432340 NWD2Q9ULI1 1742 aa24.02■■□□□ 1.44
NUP50-209ENST00000432340 FAM83GA6ND36 823 aa24.02■■□□□ 1.44
NUP50-209ENST00000432340 SPON1Q9HCB6 807 aa24.02■■□□□ 1.44
NUP50-209ENST00000432340 CAMKK2Q96RR4 588 aa24.01■■□□□ 1.43
NUP50-209ENST00000432340 PHF8Q9UPP1 1060 aa24.01■■□□□ 1.43
NUP50-209ENST00000432340 ADGRB2O60241 1585 aa24■■□□□ 1.43
NUP50-209ENST00000432340 KIF1AQ12756 1690 aa24■■□□□ 1.43
NUP50-209ENST00000432340 BTG4Q9NY30 223 aa24■■□□□ 1.43
NUP50-209ENST00000432340 RGPD1P0DJD0 1748 aa23.99■■□□□ 1.43
NUP50-209ENST00000432340 TECPR2O15040 1411 aa23.99■■□□□ 1.43
NUP50-209ENST00000432340 PLEKHG5O94827 1062 aa23.98■■□□□ 1.43
NUP50-209ENST00000432340 IFFO2Q5TF58 517 aa23.98■■□□□ 1.43
NUP50-209ENST00000432340 WAPLQ7Z5K2 1190 aa23.98■■□□□ 1.43
NUP50-209ENST00000432340 STK26Q9P289 416 aa23.98■■□□□ 1.43
NUP50-209ENST00000432340 CLTCL1P53675 1640 aa23.98■■□□□ 1.43
NUP50-209ENST00000432340 APBA3O96018 575 aa23.97■■□□□ 1.43
NUP50-209ENST00000432340 ABCC11Q96J66 1382 aa23.97■■□□□ 1.43
NUP50-209ENST00000432340 SPATA31A5Q5VU36 1347 aa23.96■■□□□ 1.43
NUP50-209ENST00000432340 SPATA31A7Q8IWB4 1347 aa23.96■■□□□ 1.43
NUP50-209ENST00000432340 TRIM37O94972 964 aa23.94■■□□□ 1.42
NUP50-209ENST00000432340 FAM182BQ5T319 152 aa23.94■■□□□ 1.42
NUP50-209ENST00000432340 KCNQ2O43526 872 aa23.93■■□□□ 1.42
NUP50-209ENST00000432340 ITGAEP38570 1179 aa23.93■■□□□ 1.42
NUP50-209ENST00000432340 PLCH1Q4KWH8 1693 aa23.92■■□□□ 1.42
NUP50-209ENST00000432340 SENP3-EIF4A1A0A087X0R7 540 aa23.92■■□□□ 1.42
NUP50-209ENST00000432340 SIRT1Q96EB6 747 aa23.91■■□□□ 1.42
NUP50-209ENST00000432340 KIF1BO60333 1816 aa23.9■■□□□ 1.42
NUP50-209ENST00000432340 RRBP1Q9P2E9 1410 aaKnown RBP23.9■■□□□ 1.42
NUP50-209ENST00000432340 ZNF784Q8NCA9 323 aaPredicted RBP23.87■■□□□ 1.41
NUP50-209ENST00000432340 NRXN1Q9ULB1 1477 aa23.87■■□□□ 1.41
NUP50-209ENST00000432340 PDE3BQ13370 1112 aa23.86■■□□□ 1.41
NUP50-209ENST00000432340 C11orf95C9JLR9 678 aaPredicted RBP23.85■■□□□ 1.41
NUP50-209ENST00000432340 PRDM11Q9NQV5 511 aa23.85■■□□□ 1.41
NUP50-209ENST00000432340 PLEKHH1Q9ULM0 1364 aa23.85■■□□□ 1.41
NUP50-209ENST00000432340 GPRASP1Q5JY77 1395 aa23.84■■□□□ 1.41
NUP50-209ENST00000432340 ANKRD30BQ9BXX2 1392 aa23.84■■□□□ 1.41
NUP50-209ENST00000432340 FMN2Q9NZ56 1722 aa23.82■■□□□ 1.4
NUP50-209ENST00000432340 SPATA31A1Q5TZJ5 1347 aa23.82■■□□□ 1.4
NUP50-209ENST00000432340 ADGRF5Q8IZF2 1346 aa23.82■■□□□ 1.4
NUP50-209ENST00000432340 C1QTNF8P60827 252 aa23.81■■□□□ 1.4
NUP50-209ENST00000432340 TMEM132EQ6IEE7 984 aa23.8■■□□□ 1.4
NUP50-209ENST00000432340 COL14A1Q05707 1796 aaKnown RBP23.8■■□□□ 1.4
NUP50-209ENST00000432340 TNS1Q9HBL0 1735 aaKnown RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms