RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 FMN2Q9NZ56 1722 aa21.41■■□□□ 1.02
SEC13-212ENST00000432213 PXDNQ92626 1479 aa21.4■■□□□ 1.02
SEC13-212ENST00000432213 CDK12Q9NYV4 1490 aaPredicted RBP21.4■■□□□ 1.02
SEC13-212ENST00000432213 SOS2Q07890 1332 aaPredicted RBP21.4■■□□□ 1.02
SEC13-212ENST00000432213 RXRBP28702 533 aa21.39■■□□□ 1.01
SEC13-212ENST00000432213 CCDC144AA2RUR9 1427 aa21.38■■□□□ 1.01
SEC13-212ENST00000432213 RGL3Q3MIN7 710 aa21.38■■□□□ 1.01
SEC13-212ENST00000432213 TECPR2O15040 1411 aa21.38■■□□□ 1.01
SEC13-212ENST00000432213 PIK3C2GO75747 1445 aa21.38■■□□□ 1.01
SEC13-212ENST00000432213 ADAMTS2O95450 1211 aa21.37■■□□□ 1.01
SEC13-212ENST00000432213 WAPLQ7Z5K2 1190 aa21.36■■□□□ 1.01
SEC13-212ENST00000432213 MPHOSPH9Q99550 1183 aa21.36■■□□□ 1.01
SEC13-212ENST00000432213 MYOM2P54296 1465 aa21.35■■□□□ 1.01
SEC13-212ENST00000432213 TMEM132EQ6IEE7 984 aa21.35■■□□□ 1.01
SEC13-212ENST00000432213 XPCQ01831 940 aaPredicted RBP21.34■■□□□ 1.01
SEC13-212ENST00000432213 STK26Q9P289 416 aa21.34■■□□□ 1.01
SEC13-212ENST00000432213 LRPPRCP42704 1394 aaKnown RBP21.33■■□□□ 1
SEC13-212ENST00000432213 NUTM2FA1L443 756 aa21.32■■□□□ 1
SEC13-212ENST00000432213 QTRT2Q9H974 415 aaKnown RBP21.32■■□□□ 1
SEC13-212ENST00000432213 NRXN1Q9ULB1 1477 aa21.3■■□□□ 1
SEC13-212ENST00000432213 ANKRD30BQ9BXX2 1392 aa21.29■■□□□ 1
SEC13-212ENST00000432213 ESCO1Q5FWF5 840 aa21.29■■□□□ 1
SEC13-212ENST00000432213 ABCA3Q99758 1704 aa21.29■■□□□ 1
SEC13-212ENST00000432213 YTHDC2Q9H6S0 1430 aaKnown RBP21.29■■□□□ 1
SEC13-212ENST00000432213 KIF1AQ12756 1690 aa21.28■■□□□ 1
SEC13-212ENST00000432213 NGLY1Q96IV0 654 aa21.28■■□□□ 1
SEC13-212ENST00000432213 USP32Q8NFA0 1604 aa21.28■■□□□ 1
SEC13-212ENST00000432213 ABCC11Q96J66 1382 aa21.27■■□□□ 1
SEC13-212ENST00000432213 ATRNO75882 1429 aa21.27■■□□□ 1
SEC13-212ENST00000432213 FOXO3O43524 673 aa21.26■□□□□ 0.99
SEC13-212ENST00000432213 RBM6P78332 1123 aaKnown RBP21.26■□□□□ 0.99
SEC13-212ENST00000432213 BCL9LQ86UU0 1499 aa21.26■□□□□ 0.99
SEC13-212ENST00000432213 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.25■□□□□ 0.99
SEC13-212ENST00000432213 NPHP3Q7Z494 1330 aa21.24■□□□□ 0.99
SEC13-212ENST00000432213 USP21Q9UK80 565 aa21.23■□□□□ 0.99
SEC13-212ENST00000432213 BRWD3Q6RI45 1802 aa21.22■□□□□ 0.99
SEC13-212ENST00000432213 FNBP4Q8N3X1 1017 aaPredicted RBP21.22■□□□□ 0.99
SEC13-212ENST00000432213 GLI3P10071 1580 aa21.22■□□□□ 0.99
SEC13-212ENST00000432213 CFAP70Q5T0N1 1121 aa21.21■□□□□ 0.99
SEC13-212ENST00000432213 ADGRB1O14514 1584 aa21.21■□□□□ 0.99
SEC13-212ENST00000432213 PLCH1Q4KWH8 1693 aa21.21■□□□□ 0.99
SEC13-212ENST00000432213 RAB3GAP2Q9H2M9 1393 aa21.21■□□□□ 0.99
SEC13-212ENST00000432213 C14orf93Q9H972 538 aaKnown RBP21.19■□□□□ 0.98
SEC13-212ENST00000432213 TRPM3Q9HCF6 1732 aaPredicted RBP21.18■□□□□ 0.98
SEC13-212ENST00000432213 EP400Q96L91 3159 aa21.18■□□□□ 0.98
SEC13-212ENST00000432213 ADGRB2O60241 1585 aa21.17■□□□□ 0.98
SEC13-212ENST00000432213 SPATA31A3Q5VYP0 1347 aa21.16■□□□□ 0.98
SEC13-212ENST00000432213 SAFB2Q14151 953 aaKnown RBP eCLIP21.16■□□□□ 0.98
SEC13-212ENST00000432213 TRPC5Q9UL62 973 aaPredicted RBP21.16■□□□□ 0.98
SEC13-212ENST00000432213 SLIT2O94813 1529 aa21.15■□□□□ 0.98
SEC13-212ENST00000432213 DLC1Q96QB1 1528 aa21.15■□□□□ 0.98
SEC13-212ENST00000432213 TNS3Q68CZ2 1445 aa21.12■□□□□ 0.97
SEC13-212ENST00000432213 CRYBG1Q9Y4K1 1723 aa21.12■□□□□ 0.97
SEC13-212ENST00000432213 ALS2Q96Q42 1657 aa21.12■□□□□ 0.97
SEC13-212ENST00000432213 PRAM1Q96QH2 718 aa21.12■□□□□ 0.97
SEC13-212ENST00000432213 RALGAPBQ86X10 1494 aa21.12■□□□□ 0.97
SEC13-212ENST00000432213 NRAPQ86VF7 1730 aa21.12■□□□□ 0.97
SEC13-212ENST00000432213 ARHGEF28Q8N1W1 1705 aaKnown RBP21.12■□□□□ 0.97
SEC13-212ENST00000432213 ATAD2Q6PL18 1390 aa21.11■□□□□ 0.97
SEC13-212ENST00000432213 CABLES1Q8TDN4 633 aa21.11■□□□□ 0.97
SEC13-212ENST00000432213 NWD2Q9ULI1 1742 aa21.1■□□□□ 0.97
SEC13-212ENST00000432213 PLEKHG5O94827 1062 aa21.1■□□□□ 0.97
SEC13-212ENST00000432213 KRT28Q7Z3Y7 464 aa21.1■□□□□ 0.97
SEC13-212ENST00000432213 SIRT1Q96EB6 747 aa21.1■□□□□ 0.97
SEC13-212ENST00000432213 DHX57Q6P158 1386 aaKnown RBP21.1■□□□□ 0.97
SEC13-212ENST00000432213 PHF8Q9UPP1 1060 aa21.09■□□□□ 0.97
SEC13-212ENST00000432213 GJD4Q96KN9 370 aaPredicted RBP21.07■□□□□ 0.96
SEC13-212ENST00000432213 PRR36Q9H6K5 1346 aa21.06■□□□□ 0.96
SEC13-212ENST00000432213 HIRIP3Q9BW71 556 aaPredicted RBP21.06■□□□□ 0.96
SEC13-212ENST00000432213 PMFBP1Q8TBY8 1022 aa21.04■□□□□ 0.96
SEC13-212ENST00000432213 SBNO1A3KN83 1393 aa21.03■□□□□ 0.96
SEC13-212ENST00000432213 UNC5CLQ8IV45 518 aa21.03■□□□□ 0.96
SEC13-212ENST00000432213 TRAK1Q9UPV9 953 aa21.03■□□□□ 0.96
SEC13-212ENST00000432213 TULP4Q9NRJ4 1543 aa21.03■□□□□ 0.96
SEC13-212ENST00000432213 ANKARQ7Z5J8 1434 aa21.03■□□□□ 0.96
SEC13-212ENST00000432213 KDM2AQ9Y2K7 1162 aa21.02■□□□□ 0.96
SEC13-212ENST00000432213 MINK1Q8N4C8 1332 aaPredicted RBP21.02■□□□□ 0.95
SEC13-212ENST00000432213 TOPAZ1Q8N9V7 1692 aa20.99■□□□□ 0.95
SEC13-212ENST00000432213 ITSN1Q15811 1721 aa20.99■□□□□ 0.95
SEC13-212ENST00000432213 POGKQ9P215 609 aa20.99■□□□□ 0.95
SEC13-212ENST00000432213 DCAF11Q8TEB1 546 aa20.98■□□□□ 0.95
SEC13-212ENST00000432213 COL14A1Q05707 1796 aaKnown RBP20.97■□□□□ 0.95
SEC13-212ENST00000432213 PHRF1Q9P1Y6 1649 aaKnown RBP20.97■□□□□ 0.95
SEC13-212ENST00000432213 ATP7BP35670 1465 aa20.97■□□□□ 0.95
SEC13-212ENST00000432213 LMOD2Q6P5Q4 547 aa20.97■□□□□ 0.95
SEC13-212ENST00000432213 FAM83GA6ND36 823 aa20.96■□□□□ 0.95
SEC13-212ENST00000432213 PSME1Q06323 249 aa20.95■□□□□ 0.94
SEC13-212ENST00000432213 ARHGEF10O15013 1369 aa20.95■□□□□ 0.94
SEC13-212ENST00000432213 SRCAPQ6ZRS2 3230 aa20.93■□□□□ 0.94
SEC13-212ENST00000432213 HAP1P54257 671 aaPredicted RBP20.93■□□□□ 0.94
SEC13-212ENST00000432213 VPS72Q15906 364 aa20.93■□□□□ 0.94
SEC13-212ENST00000432213 SEPT12Q8IYM1 358 aa20.93■□□□□ 0.94
SEC13-212ENST00000432213 ACIN1Q9UKV3 1341 aaKnown RBP20.93■□□□□ 0.94
SEC13-212ENST00000432213 KIAA1210Q9ULL0 1709 aa20.92■□□□□ 0.94
SEC13-212ENST00000432213 WASLO00401 505 aaPredicted RBP20.91■□□□□ 0.94
SEC13-212ENST00000432213 DEFB132Q7Z7B7 95 aa20.91■□□□□ 0.94
SEC13-212ENST00000432213 THSD7AQ9UPZ6 1657 aa20.91■□□□□ 0.94
SEC13-212ENST00000432213 BLMP54132 1417 aaPredicted RBP20.9■□□□□ 0.94
SEC13-212ENST00000432213 TNS1Q9HBL0 1735 aaKnown RBP20.88■□□□□ 0.93
SEC13-212ENST00000432213 ONECUT3O60422 494 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms