RNA–Protein interactions for RNA: ENST00000431120.1

GCSHP3-201, Transcript of glycine cleavage system protein H pseudogene 3, humanhuman

BASIC

Gene GCSHP3, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP3-201ENST00000431120 ABCC11Q96J66 1382 aa20.16■□□□□ 0.82
GCSHP3-201ENST00000431120 CDC42BPGQ6DT37 1551 aa20.16■□□□□ 0.82
GCSHP3-201ENST00000431120 C8orf37Q96NL8 207 aa20.15■□□□□ 0.82
GCSHP3-201ENST00000431120 NPHP3Q7Z494 1330 aa20.15■□□□□ 0.82
GCSHP3-201ENST00000431120 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.81
GCSHP3-201ENST00000431120 UPF1Q92900 1129 aaKnown RBP eCLIP20.14■□□□□ 0.81
GCSHP3-201ENST00000431120 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
GCSHP3-201ENST00000431120 PIK3C2GO75747 1445 aa20.12■□□□□ 0.81
GCSHP3-201ENST00000431120 ESCO1Q5FWF5 840 aa20.12■□□□□ 0.81
GCSHP3-201ENST00000431120 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
GCSHP3-201ENST00000431120 QTRT2Q9H974 415 aaKnown RBP20.12■□□□□ 0.81
GCSHP3-201ENST00000431120 IFT172Q9UG01 1749 aa20.11■□□□□ 0.81
GCSHP3-201ENST00000431120 STK26Q9P289 416 aa20.1■□□□□ 0.81
GCSHP3-201ENST00000431120 ADAMTS2O95450 1211 aa20.09■□□□□ 0.81
GCSHP3-201ENST00000431120 KNDC1Q76NI1 1749 aa20.08■□□□□ 0.81
GCSHP3-201ENST00000431120 WAPLQ7Z5K2 1190 aa20.08■□□□□ 0.81
GCSHP3-201ENST00000431120 FNBP4Q8N3X1 1017 aaPredicted RBP20.08■□□□□ 0.81
GCSHP3-201ENST00000431120 C14orf93Q9H972 538 aaKnown RBP20.08■□□□□ 0.81
GCSHP3-201ENST00000431120 COL22A1Q8NFW1 1626 aaPredicted RBP20.08■□□□□ 0.8
GCSHP3-201ENST00000431120 TMEM132EQ6IEE7 984 aa20.07■□□□□ 0.8
GCSHP3-201ENST00000431120 YTHDC2Q9H6S0 1430 aaKnown RBP20.07■□□□□ 0.8
GCSHP3-201ENST00000431120 PXDNQ92626 1479 aa20.05■□□□□ 0.8
GCSHP3-201ENST00000431120 FOXO3O43524 673 aa20.05■□□□□ 0.8
GCSHP3-201ENST00000431120 USP21Q9UK80 565 aa20.05■□□□□ 0.8
GCSHP3-201ENST00000431120 TRPC5Q9UL62 973 aaPredicted RBP20.05■□□□□ 0.8
GCSHP3-201ENST00000431120 MYOM2P54296 1465 aa20.05■□□□□ 0.8
GCSHP3-201ENST00000431120 NRXN1Q9ULB1 1477 aa20.05■□□□□ 0.8
GCSHP3-201ENST00000431120 RGS12O14924 1447 aa20.04■□□□□ 0.8
GCSHP3-201ENST00000431120 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
GCSHP3-201ENST00000431120 PLEKHH1Q9ULM0 1364 aa20.02■□□□□ 0.8
GCSHP3-201ENST00000431120 RAB3GAP2Q9H2M9 1393 aa19.99■□□□□ 0.79
GCSHP3-201ENST00000431120 STAC3Q96MF2 364 aa19.99■□□□□ 0.79
GCSHP3-201ENST00000431120 KIF1AQ12756 1690 aa19.99■□□□□ 0.79
GCSHP3-201ENST00000431120 ATRNO75882 1429 aa19.99■□□□□ 0.79
GCSHP3-201ENST00000431120 FMN2Q9NZ56 1722 aa19.99■□□□□ 0.79
GCSHP3-201ENST00000431120 NUTM2FA1L443 756 aa19.98■□□□□ 0.79
GCSHP3-201ENST00000431120 CFAP70Q5T0N1 1121 aa19.98■□□□□ 0.79
GCSHP3-201ENST00000431120 SPATA31A3Q5VYP0 1347 aa19.98■□□□□ 0.79
GCSHP3-201ENST00000431120 XPCQ01831 940 aaPredicted RBP19.97■□□□□ 0.79
GCSHP3-201ENST00000431120 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
GCSHP3-201ENST00000431120 HRCP23327 699 aa19.96■□□□□ 0.79
GCSHP3-201ENST00000431120 BCL9LQ86UU0 1499 aa19.95■□□□□ 0.78
GCSHP3-201ENST00000431120 PSME1Q06323 249 aa19.95■□□□□ 0.78
GCSHP3-201ENST00000431120 KRT28Q7Z3Y7 464 aa19.95■□□□□ 0.78
GCSHP3-201ENST00000431120 PHF8Q9UPP1 1060 aa19.95■□□□□ 0.78
GCSHP3-201ENST00000431120 DLC1Q96QB1 1528 aa19.95■□□□□ 0.78
GCSHP3-201ENST00000431120 PRAM1Q96QH2 718 aa19.93■□□□□ 0.78
GCSHP3-201ENST00000431120 MARF1Q9Y4F3 1742 aaKnown RBP19.93■□□□□ 0.78
GCSHP3-201ENST00000431120 POGKQ9P215 609 aa19.92■□□□□ 0.78
GCSHP3-201ENST00000431120 ANKARQ7Z5J8 1434 aa19.92■□□□□ 0.78
GCSHP3-201ENST00000431120 GJD4Q96KN9 370 aaPredicted RBP19.91■□□□□ 0.78
GCSHP3-201ENST00000431120 SBNO1A3KN83 1393 aa19.91■□□□□ 0.78
GCSHP3-201ENST00000431120 UNC5CLQ8IV45 518 aa19.9■□□□□ 0.78
GCSHP3-201ENST00000431120 TNS3Q68CZ2 1445 aa19.9■□□□□ 0.78
GCSHP3-201ENST00000431120 SLIT2O94813 1529 aa19.89■□□□□ 0.77
GCSHP3-201ENST00000431120 EIF3AQ14152 1382 aaKnown RBP19.89■□□□□ 0.77
GCSHP3-201ENST00000431120 CCDC125Q86Z20 511 aa19.89■□□□□ 0.77
GCSHP3-201ENST00000431120 ADGRB1O14514 1584 aa19.88■□□□□ 0.77
GCSHP3-201ENST00000431120 ARHGEF10O15013 1369 aa19.88■□□□□ 0.77
GCSHP3-201ENST00000431120 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.88■□□□□ 0.77
GCSHP3-201ENST00000431120 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
GCSHP3-201ENST00000431120 SAFB2Q14151 953 aaKnown RBP eCLIP19.87■□□□□ 0.77
GCSHP3-201ENST00000431120 USP32Q8NFA0 1604 aa19.85■□□□□ 0.77
GCSHP3-201ENST00000431120 HAP1P54257 671 aaPredicted RBP19.85■□□□□ 0.77
GCSHP3-201ENST00000431120 DCAF11Q8TEB1 546 aa19.85■□□□□ 0.77
GCSHP3-201ENST00000431120 TRAK1Q9UPV9 953 aa19.84■□□□□ 0.77
GCSHP3-201ENST00000431120 RGPD8O14715 1765 aaPredicted RBP19.84■□□□□ 0.77
GCSHP3-201ENST00000431120 KDM2AQ9Y2K7 1162 aa19.82■□□□□ 0.76
GCSHP3-201ENST00000431120 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
GCSHP3-201ENST00000431120 VPS72Q15906 364 aa19.81■□□□□ 0.76
GCSHP3-201ENST00000431120 GPRASP1Q5JY77 1395 aa19.81■□□□□ 0.76
GCSHP3-201ENST00000431120 WASLO00401 505 aaPredicted RBP19.8■□□□□ 0.76
GCSHP3-201ENST00000431120 PMFBP1Q8TBY8 1022 aa19.8■□□□□ 0.76
GCSHP3-201ENST00000431120 LMOD2Q6P5Q4 547 aa19.79■□□□□ 0.76
GCSHP3-201ENST00000431120 CABLES1Q8TDN4 633 aa19.79■□□□□ 0.76
GCSHP3-201ENST00000431120 TULP4Q9NRJ4 1543 aa19.79■□□□□ 0.76
GCSHP3-201ENST00000431120 EP400Q96L91 3159 aa19.79■□□□□ 0.76
GCSHP3-201ENST00000431120 MINK1Q8N4C8 1332 aaPredicted RBP19.78■□□□□ 0.76
GCSHP3-201ENST00000431120 ONECUT3O60422 494 aaPredicted RBP19.78■□□□□ 0.76
GCSHP3-201ENST00000431120 NWD2Q9ULI1 1742 aa19.78■□□□□ 0.76
GCSHP3-201ENST00000431120 GLI3P10071 1580 aa19.78■□□□□ 0.76
GCSHP3-201ENST00000431120 HIRIP3Q9BW71 556 aaPredicted RBP19.77■□□□□ 0.76
GCSHP3-201ENST00000431120 PRR36Q9H6K5 1346 aa19.76■□□□□ 0.75
GCSHP3-201ENST00000431120 ZRANB1Q9UGI0 708 aa19.75■□□□□ 0.75
GCSHP3-201ENST00000431120 FAM83GA6ND36 823 aa19.74■□□□□ 0.75
GCSHP3-201ENST00000431120 NGDNQ8NEJ9 315 aaKnown RBP19.74■□□□□ 0.75
GCSHP3-201ENST00000431120 BLMP54132 1417 aaPredicted RBP19.74■□□□□ 0.75
GCSHP3-201ENST00000431120 ABCA3Q99758 1704 aa19.73■□□□□ 0.75
GCSHP3-201ENST00000431120 SEPT12Q8IYM1 358 aa19.73■□□□□ 0.75
GCSHP3-201ENST00000431120 TRPM3Q9HCF6 1732 aaPredicted RBP19.73■□□□□ 0.75
GCSHP3-201ENST00000431120 CCDC9Q9Y3X0 531 aaKnown RBP19.72■□□□□ 0.75
GCSHP3-201ENST00000431120 PLCH1Q4KWH8 1693 aa19.71■□□□□ 0.75
GCSHP3-201ENST00000431120 ALS2Q96Q42 1657 aa19.71■□□□□ 0.75
GCSHP3-201ENST00000431120 NUDT16Q96DE0 195 aaKnown RBP19.69■□□□□ 0.74
GCSHP3-201ENST00000431120 ARHGEF28Q8N1W1 1705 aaKnown RBP19.68■□□□□ 0.74
GCSHP3-201ENST00000431120 ATP7BP35670 1465 aa19.68■□□□□ 0.74
GCSHP3-201ENST00000431120 SRCAPQ6ZRS2 3230 aa19.68■□□□□ 0.74
GCSHP3-201ENST00000431120 PLEKHG5O94827 1062 aa19.68■□□□□ 0.74
GCSHP3-201ENST00000431120 SF3B2Q13435 895 aaKnown RBP19.68■□□□□ 0.74
GCSHP3-201ENST00000431120 KRT27Q7Z3Y8 459 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms