RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 FNBP4Q8N3X1 1017 aaPredicted RBP22.4■■□□□ 1.18
PTCD1-204ENST00000430982 CCDC144AA2RUR9 1427 aa22.4■■□□□ 1.18
PTCD1-204ENST00000430982 ADAMTS2O95450 1211 aa22.37■■□□□ 1.17
PTCD1-204ENST00000430982 TRPC5Q9UL62 973 aaPredicted RBP22.37■■□□□ 1.17
PTCD1-204ENST00000430982 USP21Q9UK80 565 aa22.36■■□□□ 1.17
PTCD1-204ENST00000430982 MYOM2P54296 1465 aa22.35■■□□□ 1.17
PTCD1-204ENST00000430982 KIF1BO60333 1816 aa22.35■■□□□ 1.17
PTCD1-204ENST00000430982 TRIM26Q12899 539 aaPredicted RBP22.33■■□□□ 1.17
PTCD1-204ENST00000430982 ZRANB1Q9UGI0 708 aa22.32■■□□□ 1.16
PTCD1-204ENST00000430982 BCL9LQ86UU0 1499 aa22.32■■□□□ 1.16
PTCD1-204ENST00000430982 ROBO2Q9HCK4 1378 aa22.31■■□□□ 1.16
PTCD1-204ENST00000430982 RGL3Q3MIN7 710 aa22.31■■□□□ 1.16
PTCD1-204ENST00000430982 ORAI2Q96SN7 254 aa22.31■■□□□ 1.16
PTCD1-204ENST00000430982 MARF1Q9Y4F3 1742 aaKnown RBP22.31■■□□□ 1.16
PTCD1-204ENST00000430982 CCDC125Q86Z20 511 aa22.3■■□□□ 1.16
PTCD1-204ENST00000430982 RPGRIP1LQ68CZ1 1315 aa22.3■■□□□ 1.16
PTCD1-204ENST00000430982 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.28■■□□□ 1.16
PTCD1-204ENST00000430982 PXDNQ92626 1479 aa22.28■■□□□ 1.16
PTCD1-204ENST00000430982 ANKRD30BQ9BXX2 1392 aa22.27■■□□□ 1.16
PTCD1-204ENST00000430982 VGFO15240 615 aaPredicted RBP22.27■■□□□ 1.16
PTCD1-204ENST00000430982 SPATA31E1Q6ZUB1 1445 aa22.27■■□□□ 1.16
PTCD1-204ENST00000430982 CDC42BPGQ6DT37 1551 aa22.26■■□□□ 1.15
PTCD1-204ENST00000430982 GLI3P10071 1580 aa22.21■■□□□ 1.15
PTCD1-204ENST00000430982 NPHP3Q7Z494 1330 aa22.21■■□□□ 1.15
PTCD1-204ENST00000430982 GJD4Q96KN9 370 aaPredicted RBP22.2■■□□□ 1.14
PTCD1-204ENST00000430982 BLMP54132 1417 aaPredicted RBP22.2■■□□□ 1.14
PTCD1-204ENST00000430982 SLIT2O94813 1529 aa22.19■■□□□ 1.14
PTCD1-204ENST00000430982 PPLO60437 1756 aa22.18■■□□□ 1.14
PTCD1-204ENST00000430982 LRP5O75197 1615 aa22.18■■□□□ 1.14
PTCD1-204ENST00000430982 ADGRF5Q8IZF2 1346 aa22.18■■□□□ 1.14
PTCD1-204ENST00000430982 RALGAPBQ86X10 1494 aa22.16■■□□□ 1.14
PTCD1-204ENST00000430982 BRWD3Q6RI45 1802 aa22.13■■□□□ 1.13
PTCD1-204ENST00000430982 TECPR2O15040 1411 aa22.13■■□□□ 1.13
PTCD1-204ENST00000430982 USP32Q8NFA0 1604 aa22.12■■□□□ 1.13
PTCD1-204ENST00000430982 ESCO1Q5FWF5 840 aa22.11■■□□□ 1.13
PTCD1-204ENST00000430982 UNC5CLQ8IV45 518 aa22.11■■□□□ 1.13
PTCD1-204ENST00000430982 FOXO3O43524 673 aa22.1■■□□□ 1.13
PTCD1-204ENST00000430982 IFT172Q9UG01 1749 aa22.1■■□□□ 1.13
PTCD1-204ENST00000430982 LRPPRCP42704 1394 aaKnown RBP22.1■■□□□ 1.13
PTCD1-204ENST00000430982 KDM2AQ9Y2K7 1162 aa22.09■■□□□ 1.13
PTCD1-204ENST00000430982 KIF1AQ12756 1690 aa22.07■■□□□ 1.12
PTCD1-204ENST00000430982 PIK3C2GO75747 1445 aa22.07■■□□□ 1.12
PTCD1-204ENST00000430982 XPCQ01831 940 aaPredicted RBP22.07■■□□□ 1.12
PTCD1-204ENST00000430982 DCAF11Q8TEB1 546 aa22.07■■□□□ 1.12
PTCD1-204ENST00000430982 DHX57Q6P158 1386 aaKnown RBP22.07■■□□□ 1.12
PTCD1-204ENST00000430982 SPATA31A3Q5VYP0 1347 aa22.06■■□□□ 1.12
PTCD1-204ENST00000430982 KNDC1Q76NI1 1749 aa22.06■■□□□ 1.12
PTCD1-204ENST00000430982 FMN2Q9NZ56 1722 aa22.06■■□□□ 1.12
PTCD1-204ENST00000430982 DEFB132Q7Z7B7 95 aa22.06■■□□□ 1.12
PTCD1-204ENST00000430982 NWD2Q9ULI1 1742 aa22.05■■□□□ 1.12
PTCD1-204ENST00000430982 NRXN1Q9ULB1 1477 aa22.03■■□□□ 1.12
PTCD1-204ENST00000430982 ONECUT3O60422 494 aaPredicted RBP22.03■■□□□ 1.12
PTCD1-204ENST00000430982 CFAP70Q5T0N1 1121 aa22.03■■□□□ 1.12
PTCD1-204ENST00000430982 TMEM132EQ6IEE7 984 aa22.03■■□□□ 1.12
PTCD1-204ENST00000430982 PLCH1Q4KWH8 1693 aa22.03■■□□□ 1.12
PTCD1-204ENST00000430982 SIN3AQ96ST3 1273 aa22.02■■□□□ 1.12
PTCD1-204ENST00000430982 C14orf93Q9H972 538 aaKnown RBP22.02■■□□□ 1.12
PTCD1-204ENST00000430982 STK26Q9P289 416 aa22.02■■□□□ 1.12
PTCD1-204ENST00000430982 ABCA3Q99758 1704 aa22.01■■□□□ 1.11
PTCD1-204ENST00000430982 PCGF6Q9BYE7 350 aa22.01■■□□□ 1.11
PTCD1-204ENST00000430982 ABCC11Q96J66 1382 aa22■■□□□ 1.11
PTCD1-204ENST00000430982 NEUROD1Q13562 356 aa22■■□□□ 1.11
PTCD1-204ENST00000430982 VPS72Q15906 364 aa22■■□□□ 1.11
PTCD1-204ENST00000430982 SEPT12Q8IYM1 358 aa22■■□□□ 1.11
PTCD1-204ENST00000430982 STAC3Q96MF2 364 aa21.99■■□□□ 1.11
PTCD1-204ENST00000430982 TNS3Q68CZ2 1445 aa21.98■■□□□ 1.11
PTCD1-204ENST00000430982 PLEKHH1Q9ULM0 1364 aa21.98■■□□□ 1.11
PTCD1-204ENST00000430982 WAPLQ7Z5K2 1190 aa21.97■■□□□ 1.11
PTCD1-204ENST00000430982 SF3B2Q13435 895 aaKnown RBP21.96■■□□□ 1.11
PTCD1-204ENST00000430982 NUTM2FA1L443 756 aa21.95■■□□□ 1.1
PTCD1-204ENST00000430982 YTHDC2Q9H6S0 1430 aaKnown RBP21.95■■□□□ 1.1
PTCD1-204ENST00000430982 KRT27Q7Z3Y8 459 aa21.94■■□□□ 1.1
PTCD1-204ENST00000430982 NRAPQ86VF7 1730 aa21.94■■□□□ 1.1
PTCD1-204ENST00000430982 KRT28Q7Z3Y7 464 aa21.93■■□□□ 1.1
PTCD1-204ENST00000430982 SBNO1A3KN83 1393 aa21.92■■□□□ 1.1
PTCD1-204ENST00000430982 L3MBTL2Q969R5 705 aa21.92■■□□□ 1.1
PTCD1-204ENST00000430982 RGPD8O14715 1765 aaPredicted RBP21.92■■□□□ 1.1
PTCD1-204ENST00000430982 SIRT1Q96EB6 747 aa21.89■■□□□ 1.09
PTCD1-204ENST00000430982 RGPD1P0DJD0 1748 aa21.89■■□□□ 1.09
PTCD1-204ENST00000430982 DISP2A7MBM2 1401 aa21.89■■□□□ 1.09
PTCD1-204ENST00000430982 ARHGEF10O15013 1369 aa21.88■■□□□ 1.09
PTCD1-204ENST00000430982 BAG6P46379 1132 aa21.88■■□□□ 1.09
PTCD1-204ENST00000430982 CABLES1Q8TDN4 633 aa21.88■■□□□ 1.09
PTCD1-204ENST00000430982 PSDA5PKW4 1024 aaPredicted RBP21.87■■□□□ 1.09
PTCD1-204ENST00000430982 ADGRB1O14514 1584 aa21.87■■□□□ 1.09
PTCD1-204ENST00000430982 PSME1Q06323 249 aa21.86■■□□□ 1.09
PTCD1-204ENST00000430982 PHF8Q9UPP1 1060 aa21.86■■□□□ 1.09
PTCD1-204ENST00000430982 TRAK1Q9UPV9 953 aa21.86■■□□□ 1.09
PTCD1-204ENST00000430982 TNS1Q9HBL0 1735 aaKnown RBP21.86■■□□□ 1.09
PTCD1-204ENST00000430982 TRPM3Q9HCF6 1732 aaPredicted RBP21.84■■□□□ 1.09
PTCD1-204ENST00000430982 FAM83GA6ND36 823 aa21.84■■□□□ 1.09
PTCD1-204ENST00000430982 SAFB2Q14151 953 aaKnown RBP eCLIP21.84■■□□□ 1.09
PTCD1-204ENST00000430982 PRAM1Q96QH2 718 aa21.84■■□□□ 1.09
PTCD1-204ENST00000430982 POGKQ9P215 609 aa21.84■■□□□ 1.09
PTCD1-204ENST00000430982 THSD7AQ9UPZ6 1657 aa21.84■■□□□ 1.09
PTCD1-204ENST00000430982 COL14A1Q05707 1796 aaKnown RBP21.82■■□□□ 1.08
PTCD1-204ENST00000430982 HAP1P54257 671 aaPredicted RBP21.82■■□□□ 1.08
PTCD1-204ENST00000430982 CCDC9Q9Y3X0 531 aaKnown RBP21.82■■□□□ 1.08
PTCD1-204ENST00000430982 ALS2Q96Q42 1657 aa21.82■■□□□ 1.08
PTCD1-204ENST00000430982 TONSLQ96HA7 1378 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms