RNA–Protein interactions for RNA: ENST00000430945.5

LINC00475-205, long intergenic non-protein coding RNA 475, humanhuman

TSL 2

Gene LINC00475, Length 476 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-205ENST00000430945 FAM181BA6NEQ2 426 aa12.82□□□□□ -0.36
LINC00475-205ENST00000430945 DDX11L8A8MPP1 907 aa12.81□□□□□ -0.36
LINC00475-205ENST00000430945 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
LINC00475-205ENST00000430945 TRIM47Q96LD4 638 aa12.8□□□□□ -0.36
LINC00475-205ENST00000430945 SENP2Q9HC62 589 aa12.8□□□□□ -0.36
LINC00475-205ENST00000430945 ATP6V1AP38606 617 aa12.78□□□□□ -0.36
LINC00475-205ENST00000430945 VSIG10Q8N0Z9 540 aa12.78□□□□□ -0.36
LINC00475-205ENST00000430945 MORN1Q5T089 497 aa12.77□□□□□ -0.37
LINC00475-205ENST00000430945 SMPD1P17405 629 aa12.76□□□□□ -0.37
LINC00475-205ENST00000430945 GCGRP47871 477 aa12.76□□□□□ -0.37
LINC00475-205ENST00000430945 FUT2Q10981 343 aa12.76□□□□□ -0.37
LINC00475-205ENST00000430945 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
LINC00475-205ENST00000430945 MAP2K5Q13163 448 aa12.74□□□□□ -0.37
LINC00475-205ENST00000430945 GRIPAP1Q4V328 841 aa12.74□□□□□ -0.37
LINC00475-205ENST00000430945 PHOX2BQ99453 314 aa12.74□□□□□ -0.37
LINC00475-205ENST00000430945 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
LINC00475-205ENST00000430945 SNIP1Q8TAD8 396 aaKnown RBP12.73□□□□□ -0.37
LINC00475-205ENST00000430945 NLRP7Q8WX94 980 aa12.73□□□□□ -0.37
LINC00475-205ENST00000430945 ZBTB24O43167 697 aaPredicted RBP12.72□□□□□ -0.37
LINC00475-205ENST00000430945 KIFC2Q96AC6 838 aa12.72□□□□□ -0.37
LINC00475-205ENST00000430945 SLC16A10Q8TF71 515 aa12.71□□□□□ -0.37
LINC00475-205ENST00000430945 THAP11Q96EK4 314 aa12.71□□□□□ -0.37
LINC00475-205ENST00000430945 WNT7AO00755 349 aa12.7□□□□□ -0.38
LINC00475-205ENST00000430945 FAM160A2Q8N612 972 aaPredicted RBP12.7□□□□□ -0.38
LINC00475-205ENST00000430945 ZSCAN1Q8NBB4 408 aa12.69□□□□□ -0.38
LINC00475-205ENST00000430945 SLC27A5Q9Y2P5 690 aa12.69□□□□□ -0.38
LINC00475-205ENST00000430945 J3QL48 77 aa12.67□□□□□ -0.38
LINC00475-205ENST00000430945 PRDM9Q9NQV7 894 aa12.67□□□□□ -0.38
LINC00475-205ENST00000430945 MINK1Q8N4C8 1332 aaPredicted RBP12.65□□□□□ -0.38
LINC00475-205ENST00000430945 IRF6O14896 467 aa12.65□□□□□ -0.38
LINC00475-205ENST00000430945 CD46P15529 392 aa12.65□□□□□ -0.38
LINC00475-205ENST00000430945 LORP23490 312 aaPredicted RBP12.65□□□□□ -0.38
LINC00475-205ENST00000430945 GMPRP36959 345 aa12.65□□□□□ -0.38
LINC00475-205ENST00000430945 MSS51Q4VC12 460 aa12.65□□□□□ -0.38
LINC00475-205ENST00000430945 BRICD5Q6PL45 260 aa12.65□□□□□ -0.38
LINC00475-205ENST00000430945 Q3C1V9 767 aa12.64□□□□□ -0.39
LINC00475-205ENST00000430945 MRGPRX2Q96LB1 330 aa12.64□□□□□ -0.39
LINC00475-205ENST00000430945 HPS1Q92902 700 aa12.63□□□□□ -0.39
LINC00475-205ENST00000430945 NXF1Q9UBU9 619 aaKnown RBP12.63□□□□□ -0.39
LINC00475-205ENST00000430945 USP46P62068 366 aa12.6□□□□□ -0.39
LINC00475-205ENST00000430945 TRIM32Q13049 653 aa12.6□□□□□ -0.39
LINC00475-205ENST00000430945 SUZ12Q15022 739 aaKnown RBP12.6□□□□□ -0.39
LINC00475-205ENST00000430945 IRF7Q92985 503 aa12.6□□□□□ -0.39
LINC00475-205ENST00000430945 KDM4AO75164 1064 aa12.59□□□□□ -0.39
LINC00475-205ENST00000430945 RNF19BQ6ZMZ0 732 aa12.58□□□□□ -0.4
LINC00475-205ENST00000430945 MDM2Q00987 491 aaPredicted RBP12.57□□□□□ -0.4
LINC00475-205ENST00000430945 CCDC102AQ96A19 550 aa12.57□□□□□ -0.4
LINC00475-205ENST00000430945 REPIN1Q9BWE0 567 aaKnown RBP12.57□□□□□ -0.4
LINC00475-205ENST00000430945 CLCN1P35523 988 aa12.55□□□□□ -0.4
LINC00475-205ENST00000430945 NPAS3Q8IXF0 933 aa12.55□□□□□ -0.4
LINC00475-205ENST00000430945 GPCPD1Q9NPB8 672 aa12.55□□□□□ -0.4
LINC00475-205ENST00000430945 MMP16P51512 607 aa12.54□□□□□ -0.4
LINC00475-205ENST00000430945 ABCC9O60706 1549 aa12.53□□□□□ -0.4
LINC00475-205ENST00000430945 USB1Q9BQ65 265 aaKnown RBP12.52□□□□□ -0.41
LINC00475-205ENST00000430945 VEGFBP49765 207 aa12.51□□□□□ -0.41
LINC00475-205ENST00000430945 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
LINC00475-205ENST00000430945 HOXA2O43364 376 aa12.5□□□□□ -0.41
LINC00475-205ENST00000430945 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.5□□□□□ -0.41
LINC00475-205ENST00000430945 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
LINC00475-205ENST00000430945 H3BM21 787 aa12.48□□□□□ -0.41
LINC00475-205ENST00000430945 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
LINC00475-205ENST00000430945 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
LINC00475-205ENST00000430945 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
LINC00475-205ENST00000430945 BMP1P13497 986 aa12.45□□□□□ -0.42
LINC00475-205ENST00000430945 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
LINC00475-205ENST00000430945 TRIM46Q7Z4K8 759 aa12.44□□□□□ -0.42
LINC00475-205ENST00000430945 ALDH1A1P00352 501 aa12.43□□□□□ -0.42
LINC00475-205ENST00000430945 SKOR1P84550 965 aa12.42□□□□□ -0.42
LINC00475-205ENST00000430945 WNT7BP56706 349 aa12.41□□□□□ -0.42
LINC00475-205ENST00000430945 HLA-CQ95604 372 aa12.41□□□□□ -0.42
LINC00475-205ENST00000430945 JUNDP17535 347 aa12.4□□□□□ -0.42
LINC00475-205ENST00000430945 RETREG3Q86VR2 466 aa12.39□□□□□ -0.43
LINC00475-205ENST00000430945 CAPN5O15484 640 aaPredicted RBP12.38□□□□□ -0.43
LINC00475-205ENST00000430945 BARGINQ6ZT62 677 aa12.38□□□□□ -0.43
LINC00475-205ENST00000430945 CCDC24Q8N4L8 307 aa12.38□□□□□ -0.43
LINC00475-205ENST00000430945 GUCA2AQ02747 115 aa12.37□□□□□ -0.43
LINC00475-205ENST00000430945 KCTD17Q8N5Z5 321 aa12.37□□□□□ -0.43
LINC00475-205ENST00000430945 ZMYND10O75800 440 aa12.35□□□□□ -0.43
LINC00475-205ENST00000430945 FDX1P10109 184 aa12.35□□□□□ -0.43
LINC00475-205ENST00000430945 SSTR3P32745 418 aaPredicted RBP12.35□□□□□ -0.43
LINC00475-205ENST00000430945 KCNMA1Q12791 1236 aa12.34□□□□□ -0.43
LINC00475-205ENST00000430945 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
LINC00475-205ENST00000430945 AMHR2Q16671 573 aa12.34□□□□□ -0.43
LINC00475-205ENST00000430945 SYMPKQ92797 1274 aaKnown RBP12.32□□□□□ -0.44
LINC00475-205ENST00000430945 NUDT12Q9BQG2 462 aa12.32□□□□□ -0.44
LINC00475-205ENST00000430945 WASF2Q9Y6W5 498 aa12.32□□□□□ -0.44
LINC00475-205ENST00000430945 C6orf229H3BNL8 230 aa12.3□□□□□ -0.44
LINC00475-205ENST00000430945 SIAH2O43255 324 aa12.3□□□□□ -0.44
LINC00475-205ENST00000430945 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
LINC00475-205ENST00000430945 SPIRE2Q8WWL2 714 aa12.3□□□□□ -0.44
LINC00475-205ENST00000430945 ZFP42Q96MM3 310 aa12.3□□□□□ -0.44
LINC00475-205ENST00000430945 GSK3AP49840 483 aa12.28□□□□□ -0.44
LINC00475-205ENST00000430945 DIXDC1Q155Q3 683 aa12.28□□□□□ -0.44
LINC00475-205ENST00000430945 PCDHGC3Q9UN70 934 aa12.28□□□□□ -0.44
LINC00475-205ENST00000430945 SPDYE5A6NIY4 337 aa12.27□□□□□ -0.45
LINC00475-205ENST00000430945 MS4A1P11836 297 aa12.27□□□□□ -0.45
LINC00475-205ENST00000430945 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
LINC00475-205ENST00000430945 EHBP1Q8NDI1 1231 aa12.27□□□□□ -0.45
LINC00475-205ENST00000430945 CCNYL3P0C7X3 344 aa12.26□□□□□ -0.45
LINC00475-205ENST00000430945 VSIG8P0DPA2 414 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms