RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RCAN3Q9UKA8 241 aa18.58■□□□□ 0.57
HOXC4-202ENST00000430889 SLC12A5Q9H2X9 1139 aa18.57■□□□□ 0.56
HOXC4-202ENST00000430889 EVC2Q86UK5 1308 aa18.57■□□□□ 0.56
HOXC4-202ENST00000430889 YTHDC2Q9H6S0 1430 aaKnown RBP18.57■□□□□ 0.56
HOXC4-202ENST00000430889 WDR43Q15061 677 aaKnown RBP eCLIP18.57■□□□□ 0.56
HOXC4-202ENST00000430889 SALL2Q9Y467 1007 aaPredicted RBP18.57■□□□□ 0.56
HOXC4-202ENST00000430889 ANKRD36BQ8N2N9 1353 aa18.56■□□□□ 0.56
HOXC4-202ENST00000430889 DLC1Q96QB1 1528 aa18.55■□□□□ 0.56
HOXC4-202ENST00000430889 RBM19Q9Y4C8 960 aaKnown RBP18.55■□□□□ 0.56
HOXC4-202ENST00000430889 NINLQ9Y2I6 1382 aa18.54■□□□□ 0.56
HOXC4-202ENST00000430889 NRXN3Q9Y4C0 1643 aa18.54■□□□□ 0.56
HOXC4-202ENST00000430889 ANKRD26Q9UPS8 1709 aa18.53■□□□□ 0.56
HOXC4-202ENST00000430889 NSD2O96028 1365 aa18.53■□□□□ 0.56
HOXC4-202ENST00000430889 RIMS2Q9UQ26 1411 aa18.5■□□□□ 0.55
HOXC4-202ENST00000430889 DUSP27Q5VZP5 1158 aa18.5■□□□□ 0.55
HOXC4-202ENST00000430889 CD163L1Q9NR16 1453 aa18.5■□□□□ 0.55
HOXC4-202ENST00000430889 TRMT2AQ8IZ69 625 aaKnown RBP18.49■□□□□ 0.55
HOXC4-202ENST00000430889 CGNL1Q0VF96 1302 aa18.49■□□□□ 0.55
HOXC4-202ENST00000430889 ABCC11Q96J66 1382 aa18.48■□□□□ 0.55
HOXC4-202ENST00000430889 IQSEC2Q5JU85 1478 aa18.48■□□□□ 0.55
HOXC4-202ENST00000430889 ATAD2Q6PL18 1390 aa18.47■□□□□ 0.55
HOXC4-202ENST00000430889 MORC1Q86VD1 984 aa18.47■□□□□ 0.55
HOXC4-202ENST00000430889 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
HOXC4-202ENST00000430889 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
HOXC4-202ENST00000430889 KNDC1Q76NI1 1749 aa18.47■□□□□ 0.55
HOXC4-202ENST00000430889 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
HOXC4-202ENST00000430889 MED14O60244 1454 aa18.46■□□□□ 0.55
HOXC4-202ENST00000430889 NLRP1Q9C000 1473 aa18.46■□□□□ 0.55
HOXC4-202ENST00000430889 SLFN5Q08AF3 891 aa18.45■□□□□ 0.54
HOXC4-202ENST00000430889 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
HOXC4-202ENST00000430889 EXOC6Q8TAG9 804 aa18.44■□□□□ 0.54
HOXC4-202ENST00000430889 CCDC136Q96JN2 1154 aa18.44■□□□□ 0.54
HOXC4-202ENST00000430889 PRAM1Q96QH2 718 aa18.44■□□□□ 0.54
HOXC4-202ENST00000430889 STK26Q9P289 416 aa18.44■□□□□ 0.54
HOXC4-202ENST00000430889 ZMYM3Q14202 1370 aa18.44■□□□□ 0.54
HOXC4-202ENST00000430889 UBR1Q8IWV7 1749 aa18.44■□□□□ 0.54
HOXC4-202ENST00000430889 CCDC146Q8IYE0 955 aa18.44■□□□□ 0.54
HOXC4-202ENST00000430889 KIF20BQ96Q89 1820 aa18.43■□□□□ 0.54
HOXC4-202ENST00000430889 APAF1O14727 1248 aa18.42■□□□□ 0.54
HOXC4-202ENST00000430889 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
HOXC4-202ENST00000430889 SAFB2Q14151 953 aaKnown RBP eCLIP18.41■□□□□ 0.54
HOXC4-202ENST00000430889 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
HOXC4-202ENST00000430889 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
HOXC4-202ENST00000430889 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
HOXC4-202ENST00000430889 MINK1Q8N4C8 1332 aaPredicted RBP18.4■□□□□ 0.54
HOXC4-202ENST00000430889 MLECQ14165 292 aa18.4■□□□□ 0.54
HOXC4-202ENST00000430889 NKTRP30414 1462 aaKnown RBP18.38■□□□□ 0.53
HOXC4-202ENST00000430889 MTHFSP49914 203 aa18.38■□□□□ 0.53
HOXC4-202ENST00000430889 SPINK5Q9NQ38 1064 aaPredicted RBP18.38■□□□□ 0.53
HOXC4-202ENST00000430889 TECPR2O15040 1411 aa18.38■□□□□ 0.53
HOXC4-202ENST00000430889 CPS1P31327 1500 aa18.38■□□□□ 0.53
HOXC4-202ENST00000430889 SRPK2P78362 688 aaKnown RBP18.38■□□□□ 0.53
HOXC4-202ENST00000430889 POGKQ9P215 609 aa18.38■□□□□ 0.53
HOXC4-202ENST00000430889 TNRQ92752 1358 aa18.37■□□□□ 0.53
HOXC4-202ENST00000430889 ATP7BP35670 1465 aa18.37■□□□□ 0.53
HOXC4-202ENST00000430889 FANCIQ9NVI1 1328 aa18.37■□□□□ 0.53
HOXC4-202ENST00000430889 PLIN1O60240 522 aa18.36■□□□□ 0.53
HOXC4-202ENST00000430889 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
HOXC4-202ENST00000430889 E9PSI1 815 aa18.35■□□□□ 0.53
HOXC4-202ENST00000430889 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
HOXC4-202ENST00000430889 CDK19Q9BWU1 502 aa18.35■□□□□ 0.53
HOXC4-202ENST00000430889 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
HOXC4-202ENST00000430889 TNNT2P45379 298 aaPredicted RBP18.34■□□□□ 0.53
HOXC4-202ENST00000430889 RUNDC1Q96C34 613 aa18.34■□□□□ 0.53
HOXC4-202ENST00000430889 TERF2IPQ9NYB0 399 aa18.34■□□□□ 0.53
HOXC4-202ENST00000430889 METP08581 1390 aa18.34■□□□□ 0.53
HOXC4-202ENST00000430889 FAM135BQ49AJ0 1406 aa18.34■□□□□ 0.53
HOXC4-202ENST00000430889 FYB1O15117 783 aa18.33■□□□□ 0.52
HOXC4-202ENST00000430889 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
HOXC4-202ENST00000430889 CRBNQ96SW2 442 aa18.33■□□□□ 0.52
HOXC4-202ENST00000430889 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
HOXC4-202ENST00000430889 CFAP53Q96M91 514 aa18.32■□□□□ 0.52
HOXC4-202ENST00000430889 TMEM2Q9UHN6 1383 aa18.32■□□□□ 0.52
HOXC4-202ENST00000430889 C20orf194Q5TEA3 1177 aa18.31■□□□□ 0.52
HOXC4-202ENST00000430889 CDC42BPGQ6DT37 1551 aa18.31■□□□□ 0.52
HOXC4-202ENST00000430889 MON2Q7Z3U7 1717 aa18.31■□□□□ 0.52
HOXC4-202ENST00000430889 CCDC27Q2M243 656 aa18.31■□□□□ 0.52
HOXC4-202ENST00000430889 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
HOXC4-202ENST00000430889 AKAP12Q02952 1782 aa18.3■□□□□ 0.52
HOXC4-202ENST00000430889 CPSF1Q10570 1443 aaKnown RBP18.3■□□□□ 0.52
HOXC4-202ENST00000430889 WAPLQ7Z5K2 1190 aa18.3■□□□□ 0.52
HOXC4-202ENST00000430889 ADAMTS13Q76LX8 1427 aa18.29■□□□□ 0.52
HOXC4-202ENST00000430889 C3P01024 1663 aa18.29■□□□□ 0.52
HOXC4-202ENST00000430889 TCP11L2Q8N4U5 519 aa18.28■□□□□ 0.52
HOXC4-202ENST00000430889 GGNBP2Q9H3C7 697 aa18.28■□□□□ 0.52
HOXC4-202ENST00000430889 ESF1Q9H501 851 aaKnown RBP18.28■□□□□ 0.52
HOXC4-202ENST00000430889 HDGFL2Q7Z4V5 671 aaPredicted RBP18.28■□□□□ 0.52
HOXC4-202ENST00000430889 CABP1Q9NZU7 370 aa18.28■□□□□ 0.52
HOXC4-202ENST00000430889 WDR63Q8IWG1 891 aa18.26■□□□□ 0.51
HOXC4-202ENST00000430889 TOPAZ1Q8N9V7 1692 aa18.25■□□□□ 0.51
HOXC4-202ENST00000430889 FER1L4A9Z1Z3 1794 aa18.25■□□□□ 0.51
HOXC4-202ENST00000430889 WASLO00401 505 aaPredicted RBP18.25■□□□□ 0.51
HOXC4-202ENST00000430889 MSH5O43196 834 aa18.25■□□□□ 0.51
HOXC4-202ENST00000430889 MAP2P11137 1827 aaKnown RBP18.25■□□□□ 0.51
HOXC4-202ENST00000430889 HDGFP51858 240 aaKnown RBP18.25■□□□□ 0.51
HOXC4-202ENST00000430889 ITSN1Q15811 1721 aa18.25■□□□□ 0.51
HOXC4-202ENST00000430889 EDC4Q6P2E9 1401 aaKnown RBP18.25■□□□□ 0.51
HOXC4-202ENST00000430889 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.25■□□□□ 0.51
HOXC4-202ENST00000430889 KDM2BQ8NHM5 1336 aa18.25■□□□□ 0.51
HOXC4-202ENST00000430889 PLEKHF1Q96S99 279 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms