RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 RALYLQ86SE5 291 aaKnown RBP19.67■□□□□ 0.74
RIF1-204ENST00000430328 C9orf78Q9NZ63 289 aaPredicted RBP19.67■□□□□ 0.74
RIF1-204ENST00000430328 CFAP45Q9UL16 551 aa19.67■□□□□ 0.74
RIF1-204ENST00000430328 INTS3Q68E01 1043 aaKnown RBP19.66■□□□□ 0.74
RIF1-204ENST00000430328 RNF214Q8ND24 703 aa19.66■□□□□ 0.74
RIF1-204ENST00000430328 FANCIQ9NVI1 1328 aa19.66■□□□□ 0.74
RIF1-204ENST00000430328 EEA1Q15075 1411 aa19.66■□□□□ 0.74
RIF1-204ENST00000430328 CDK5RAP3Q96JB5 506 aa19.66■□□□□ 0.74
RIF1-204ENST00000430328 HSPA5P11021 654 aaKnown RBP19.66■□□□□ 0.74
RIF1-204ENST00000430328 TSPY26PQ9H489 355 aa19.65■□□□□ 0.74
RIF1-204ENST00000430328 LRRFIP2Q9Y608 721 aaKnown RBP19.65■□□□□ 0.74
RIF1-204ENST00000430328 FEZ1Q99689 392 aa19.65■□□□□ 0.74
RIF1-204ENST00000430328 TERF2IPQ9NYB0 399 aa19.65■□□□□ 0.74
RIF1-204ENST00000430328 SHTN1A0MZ66 631 aa19.65■□□□□ 0.74
RIF1-204ENST00000430328 KIF3BO15066 747 aa19.64■□□□□ 0.74
RIF1-204ENST00000430328 DDX23Q9BUQ8 820 aaKnown RBP19.64■□□□□ 0.73
RIF1-204ENST00000430328 GOLGA3Q08378 1498 aa19.64■□□□□ 0.73
RIF1-204ENST00000430328 GPATCH11Q8N954 259 aa19.64■□□□□ 0.73
RIF1-204ENST00000430328 AMPHP49418 695 aa19.64■□□□□ 0.73
RIF1-204ENST00000430328 PPFIBP1Q86W92 1011 aa19.64■□□□□ 0.73
RIF1-204ENST00000430328 CCDC102AQ96A19 550 aa19.64■□□□□ 0.73
RIF1-204ENST00000430328 PDCL3Q9H2J4 239 aa19.63■□□□□ 0.73
RIF1-204ENST00000430328 HSP90AB4PQ58FF6 505 aa19.63■□□□□ 0.73
RIF1-204ENST00000430328 AEBP1Q8IUX7 1158 aa19.63■□□□□ 0.73
RIF1-204ENST00000430328 MBD3O95983 291 aa19.63■□□□□ 0.73
RIF1-204ENST00000430328 SPC24Q8NBT2 197 aa19.62■□□□□ 0.73
RIF1-204ENST00000430328 ROCK1Q13464 1354 aa19.62■□□□□ 0.73
RIF1-204ENST00000430328 DESP17661 470 aa19.62■□□□□ 0.73
RIF1-204ENST00000430328 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
RIF1-204ENST00000430328 FMNL2Q96PY5 1086 aa19.61■□□□□ 0.73
RIF1-204ENST00000430328 SAMD1Q6SPF0 538 aaPredicted RBP19.61■□□□□ 0.73
RIF1-204ENST00000430328 SERPINC1P01008 464 aa19.6■□□□□ 0.73
RIF1-204ENST00000430328 TMCO3Q6UWJ1 677 aa19.6■□□□□ 0.73
RIF1-204ENST00000430328 UQCRHLA0A096LP55 91 aa19.6■□□□□ 0.73
RIF1-204ENST00000430328 UQCRHP07919 91 aa19.6■□□□□ 0.73
RIF1-204ENST00000430328 FAM107BQ9H098 131 aa19.6■□□□□ 0.73
RIF1-204ENST00000430328 STIM1Q13586 685 aa19.6■□□□□ 0.73
RIF1-204ENST00000430328 CEP162Q5TB80 1403 aa19.59■□□□□ 0.73
RIF1-204ENST00000430328 RBM25P49756 843 aaKnown RBP19.59■□□□□ 0.73
RIF1-204ENST00000430328 PDCL2Q8N4E4 241 aa19.58■□□□□ 0.72
RIF1-204ENST00000430328 CCDC175P0C221 793 aa19.58■□□□□ 0.72
RIF1-204ENST00000430328 PSMA5P28066 241 aa19.58■□□□□ 0.72
RIF1-204ENST00000430328 IPO4Q8TEX9 1081 aaKnown RBP19.58■□□□□ 0.72
RIF1-204ENST00000430328 NFKBIBQ15653 356 aa19.58■□□□□ 0.72
RIF1-204ENST00000430328 CRACR2AQ9BSW2 395 aa19.58■□□□□ 0.72
RIF1-204ENST00000430328 TRAK2O60296 914 aa19.58■□□□□ 0.72
RIF1-204ENST00000430328 NLRP13Q86W25 1043 aa19.58■□□□□ 0.72
RIF1-204ENST00000430328 GRIPAP1Q4V328 841 aa19.57■□□□□ 0.72
RIF1-204ENST00000430328 KRT18P05783 430 aaKnown RBP19.57■□□□□ 0.72
RIF1-204ENST00000430328 PDCP20941 246 aa19.57■□□□□ 0.72
RIF1-204ENST00000430328 ERC2O15083 957 aa19.57■□□□□ 0.72
RIF1-204ENST00000430328 C1orf141Q5JVX7 400 aa19.57■□□□□ 0.72
RIF1-204ENST00000430328 FAM177A1Q8N128 213 aaPredicted RBP19.57■□□□□ 0.72
RIF1-204ENST00000430328 CALCOCO1Q9P1Z2 691 aa19.56■□□□□ 0.72
RIF1-204ENST00000430328 DACH1Q9UI36 760 aa19.56■□□□□ 0.72
RIF1-204ENST00000430328 NEBLO76041 1014 aa19.56■□□□□ 0.72
RIF1-204ENST00000430328 MICALCLQ6ZW33 695 aa19.56■□□□□ 0.72
RIF1-204ENST00000430328 DDX19BQ9UMR2 479 aa19.56■□□□□ 0.72
RIF1-204ENST00000430328 G3BP1Q13283 466 aaKnown RBP eCLIP19.56■□□□□ 0.728e-6■■■■□ 20.2
RIF1-204ENST00000430328 IKQ13123 557 aaPredicted RBP19.55■□□□□ 0.72
RIF1-204ENST00000430328 JAKMIP3Q5VZ66 844 aa19.54■□□□□ 0.72
RIF1-204ENST00000430328 SART3Q15020 963 aaKnown RBP19.54■□□□□ 0.72
RIF1-204ENST00000430328 C22orf23Q9BZE7 217 aa19.54■□□□□ 0.72
RIF1-204ENST00000430328 MAP9Q49MG5 647 aa19.54■□□□□ 0.72
RIF1-204ENST00000430328 DAAM2Q86T65 1068 aa19.54■□□□□ 0.72
RIF1-204ENST00000430328 ANKRD18BA2A2Z9 1011 aa19.54■□□□□ 0.72
RIF1-204ENST00000430328 GBP3Q9H0R5 595 aa19.54■□□□□ 0.72
RIF1-204ENST00000430328 NINLQ9Y2I6 1382 aa19.53■□□□□ 0.72
RIF1-204ENST00000430328 ZNF396Q96N95 335 aaPredicted RBP19.53■□□□□ 0.72
RIF1-204ENST00000430328 CCDC192P0DO97 292 aa19.53■□□□□ 0.72
RIF1-204ENST00000430328 LTV1Q96GA3 475 aaPredicted RBP19.53■□□□□ 0.72
RIF1-204ENST00000430328 E9PSI1 815 aa19.52■□□□□ 0.72
RIF1-204ENST00000430328 BCL2L13Q9BXK5 485 aa19.52■□□□□ 0.72
RIF1-204ENST00000430328 CCNB3Q8WWL7 1395 aa19.52■□□□□ 0.71
RIF1-204ENST00000430328 IBSPP21815 317 aaPredicted RBP19.52■□□□□ 0.71
RIF1-204ENST00000430328 BMS1Q14692 1282 aaKnown RBP19.52■□□□□ 0.71
RIF1-204ENST00000430328 CBFA2T2O43439 604 aa19.51■□□□□ 0.71
RIF1-204ENST00000430328 ANAPC15P60006 121 aa19.51■□□□□ 0.71
RIF1-204ENST00000430328 CCDC27Q2M243 656 aa19.51■□□□□ 0.71
RIF1-204ENST00000430328 CRBNQ96SW2 442 aa19.51■□□□□ 0.71
RIF1-204ENST00000430328 JMYQ8N9B5 988 aa19.51■□□□□ 0.71
RIF1-204ENST00000430328 MLECQ14165 292 aa19.51■□□□□ 0.71
RIF1-204ENST00000430328 DDX58O95786 925 aaKnown RBP19.51■□□□□ 0.71
RIF1-204ENST00000430328 NGDNQ8NEJ9 315 aaKnown RBP19.51■□□□□ 0.71
RIF1-204ENST00000430328 RRP1P56182 461 aaKnown RBP19.5■□□□□ 0.71
RIF1-204ENST00000430328 CCDC113Q9H0I3 377 aa19.5■□□□□ 0.71
RIF1-204ENST00000430328 MCM3P25205 808 aa19.5■□□□□ 0.71
RIF1-204ENST00000430328 CCDC148Q8NFR7 591 aa19.5■□□□□ 0.71
RIF1-204ENST00000430328 TANGO6Q9C0B7 1094 aa19.5■□□□□ 0.71
RIF1-204ENST00000430328 ZWINTO95229 277 aa19.49■□□□□ 0.71
RIF1-204ENST00000430328 NGEFQ8N5V2 710 aa19.49■□□□□ 0.71
RIF1-204ENST00000430328 MSH5O43196 834 aa19.49■□□□□ 0.71
RIF1-204ENST00000430328 KIAA1328Q86T90 577 aa19.49■□□□□ 0.71
RIF1-204ENST00000430328 UBXN4Q92575 508 aa19.48■□□□□ 0.71
RIF1-204ENST00000430328 TEFQ10587 303 aa19.48■□□□□ 0.71
RIF1-204ENST00000430328 LUZP1Q86V48 1076 aa19.48■□□□□ 0.71
RIF1-204ENST00000430328 TTC5Q8N0Z6 440 aa19.48■□□□□ 0.71
RIF1-204ENST00000430328 CETN2P41208 172 aa19.47■□□□□ 0.71
RIF1-204ENST00000430328 MCM2P49736 904 aa19.47■□□□□ 0.71
RIF1-204ENST00000430328 GCOM1H8Y6P7 765 aaPredicted RBP19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms