RNA–Protein interactions for RNA: ENST00000429978.5

GTDC1-210, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 4

Gene GTDC1, Length 586 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-210ENST00000429978 ORAI2Q96SN7 254 aa23.22■■□□□ 1.31
GTDC1-210ENST00000429978 ANKRD30BQ9BXX2 1392 aa23.21■■□□□ 1.31
GTDC1-210ENST00000429978 SPATA31E1Q6ZUB1 1445 aa23.21■■□□□ 1.31
GTDC1-210ENST00000429978 PXDNQ92626 1479 aa23.2■■□□□ 1.3
GTDC1-210ENST00000429978 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.3
GTDC1-210ENST00000429978 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
GTDC1-210ENST00000429978 KNDC1Q76NI1 1749 aa23.19■■□□□ 1.3
GTDC1-210ENST00000429978 CCDC144AA2RUR9 1427 aa23.17■■□□□ 1.3
GTDC1-210ENST00000429978 ABCC11Q96J66 1382 aa23.17■■□□□ 1.3
GTDC1-210ENST00000429978 ACIN1Q9UKV3 1341 aaKnown RBP23.17■■□□□ 1.3
GTDC1-210ENST00000429978 TRPC5Q9UL62 973 aaPredicted RBP23.17■■□□□ 1.3
GTDC1-210ENST00000429978 ATRNO75882 1429 aa23.16■■□□□ 1.3
GTDC1-210ENST00000429978 LRPPRCP42704 1394 aaKnown RBP23.16■■□□□ 1.3
GTDC1-210ENST00000429978 PIK3C2GO75747 1445 aa23.15■■□□□ 1.3
GTDC1-210ENST00000429978 ATAD2Q6PL18 1390 aa23.14■■□□□ 1.3
GTDC1-210ENST00000429978 USP21Q9UK80 565 aa23.14■■□□□ 1.29
GTDC1-210ENST00000429978 ADAMTS2O95450 1211 aa23.13■■□□□ 1.29
GTDC1-210ENST00000429978 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
GTDC1-210ENST00000429978 ADGRF5Q8IZF2 1346 aa23.12■■□□□ 1.29
GTDC1-210ENST00000429978 SIRT1Q96EB6 747 aa23.11■■□□□ 1.29
GTDC1-210ENST00000429978 BCL9LQ86UU0 1499 aa23.11■■□□□ 1.29
GTDC1-210ENST00000429978 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.11■■□□□ 1.29
GTDC1-210ENST00000429978 KIF1AQ12756 1690 aa23.1■■□□□ 1.29
GTDC1-210ENST00000429978 ESCO1Q5FWF5 840 aa23.09■■□□□ 1.29
GTDC1-210ENST00000429978 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.29
GTDC1-210ENST00000429978 NRXN1Q9ULB1 1477 aa23.08■■□□□ 1.29
GTDC1-210ENST00000429978 YTHDC2Q9H6S0 1430 aaKnown RBP23.06■■□□□ 1.28
GTDC1-210ENST00000429978 MPHOSPH9Q99550 1183 aa23.05■■□□□ 1.28
GTDC1-210ENST00000429978 SLIT2O94813 1529 aa23.04■■□□□ 1.28
GTDC1-210ENST00000429978 FOXO3O43524 673 aa23.04■■□□□ 1.28
GTDC1-210ENST00000429978 CCDC125Q86Z20 511 aa23.04■■□□□ 1.28
GTDC1-210ENST00000429978 FOXD1Q16676 465 aa23.03■■□□□ 1.28
GTDC1-210ENST00000429978 SPATA31A3Q5VYP0 1347 aa23.03■■□□□ 1.28
GTDC1-210ENST00000429978 WAPLQ7Z5K2 1190 aa23.01■■□□□ 1.27
GTDC1-210ENST00000429978 PLEKHH1Q9ULM0 1364 aa23.01■■□□□ 1.27
GTDC1-210ENST00000429978 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
GTDC1-210ENST00000429978 GJD4Q96KN9 370 aaPredicted RBP22.99■■□□□ 1.27
GTDC1-210ENST00000429978 C14orf93Q9H972 538 aaKnown RBP22.99■■□□□ 1.27
GTDC1-210ENST00000429978 USP32Q8NFA0 1604 aa22.99■■□□□ 1.27
GTDC1-210ENST00000429978 EP400Q96L91 3159 aa22.99■■□□□ 1.27
GTDC1-210ENST00000429978 DLC1Q96QB1 1528 aa22.98■■□□□ 1.27
GTDC1-210ENST00000429978 TMEM132EQ6IEE7 984 aa22.96■■□□□ 1.27
GTDC1-210ENST00000429978 STK26Q9P289 416 aa22.96■■□□□ 1.27
GTDC1-210ENST00000429978 SBNO1A3KN83 1393 aa22.96■■□□□ 1.27
GTDC1-210ENST00000429978 TNS3Q68CZ2 1445 aa22.96■■□□□ 1.27
GTDC1-210ENST00000429978 GLI3P10071 1580 aa22.95■■□□□ 1.26
GTDC1-210ENST00000429978 DHX57Q6P158 1386 aaKnown RBP22.95■■□□□ 1.26
GTDC1-210ENST00000429978 UNC5CLQ8IV45 518 aa22.95■■□□□ 1.26
GTDC1-210ENST00000429978 ADGRB2O60241 1585 aa22.94■■□□□ 1.26
GTDC1-210ENST00000429978 RALGAPBQ86X10 1494 aa22.94■■□□□ 1.26
GTDC1-210ENST00000429978 ANKARQ7Z5J8 1434 aa22.93■■□□□ 1.26
GTDC1-210ENST00000429978 XPCQ01831 940 aaPredicted RBP22.93■■□□□ 1.26
GTDC1-210ENST00000429978 NWD2Q9ULI1 1742 aa22.93■■□□□ 1.26
GTDC1-210ENST00000429978 ARHGEF10O15013 1369 aa22.91■■□□□ 1.26
GTDC1-210ENST00000429978 PSME1Q06323 249 aa22.91■■□□□ 1.26
GTDC1-210ENST00000429978 KRT28Q7Z3Y7 464 aa22.91■■□□□ 1.26
GTDC1-210ENST00000429978 PHF8Q9UPP1 1060 aa22.9■■□□□ 1.26
GTDC1-210ENST00000429978 BLMP54132 1417 aaPredicted RBP22.9■■□□□ 1.26
GTDC1-210ENST00000429978 ABCA3Q99758 1704 aa22.89■■□□□ 1.26
GTDC1-210ENST00000429978 SRCAPQ6ZRS2 3230 aa22.89■■□□□ 1.25
GTDC1-210ENST00000429978 ZRANB1Q9UGI0 708 aa22.89■■□□□ 1.25
GTDC1-210ENST00000429978 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
GTDC1-210ENST00000429978 NUTM2FA1L443 756 aa22.88■■□□□ 1.25
GTDC1-210ENST00000429978 ONECUT3O60422 494 aaPredicted RBP22.88■■□□□ 1.25
GTDC1-210ENST00000429978 VPS72Q15906 364 aa22.87■■□□□ 1.25
GTDC1-210ENST00000429978 RGPD8O14715 1765 aaPredicted RBP22.86■■□□□ 1.25
GTDC1-210ENST00000429978 PLCH1Q4KWH8 1693 aa22.85■■□□□ 1.25
GTDC1-210ENST00000429978 CFAP70Q5T0N1 1121 aa22.85■■□□□ 1.25
GTDC1-210ENST00000429978 STAC3Q96MF2 364 aa22.85■■□□□ 1.25
GTDC1-210ENST00000429978 EIF3AQ14152 1382 aaKnown RBP22.84■■□□□ 1.25
GTDC1-210ENST00000429978 PRAM1Q96QH2 718 aa22.83■■□□□ 1.25
GTDC1-210ENST00000429978 TRPM3Q9HCF6 1732 aaPredicted RBP22.82■■□□□ 1.24
GTDC1-210ENST00000429978 ALS2Q96Q42 1657 aa22.8■■□□□ 1.24
GTDC1-210ENST00000429978 BRWD3Q6RI45 1802 aa22.8■■□□□ 1.24
GTDC1-210ENST00000429978 TULP4Q9NRJ4 1543 aa22.79■■□□□ 1.24
GTDC1-210ENST00000429978 NRAPQ86VF7 1730 aa22.78■■□□□ 1.24
GTDC1-210ENST00000429978 SEPT12Q8IYM1 358 aa22.77■■□□□ 1.24
GTDC1-210ENST00000429978 RAB3GAP2Q9H2M9 1393 aa22.76■■□□□ 1.23
GTDC1-210ENST00000429978 HAP1P54257 671 aaPredicted RBP22.76■■□□□ 1.23
GTDC1-210ENST00000429978 POGKQ9P215 609 aa22.75■■□□□ 1.23
GTDC1-210ENST00000429978 COL14A1Q05707 1796 aaKnown RBP22.75■■□□□ 1.23
GTDC1-210ENST00000429978 CABLES1Q8TDN4 633 aa22.74■■□□□ 1.23
GTDC1-210ENST00000429978 GPRASP1Q5JY77 1395 aa22.74■■□□□ 1.23
GTDC1-210ENST00000429978 CRYBG1Q9Y4K1 1723 aa22.74■■□□□ 1.23
GTDC1-210ENST00000429978 FAM83GA6ND36 823 aa22.73■■□□□ 1.23
GTDC1-210ENST00000429978 HRCP23327 699 aa22.73■■□□□ 1.23
GTDC1-210ENST00000429978 KRT27Q7Z3Y8 459 aa22.72■■□□□ 1.23
GTDC1-210ENST00000429978 WASLO00401 505 aaPredicted RBP22.7■■□□□ 1.22
GTDC1-210ENST00000429978 SF3B2Q13435 895 aaKnown RBP22.7■■□□□ 1.22
GTDC1-210ENST00000429978 SAFB2Q14151 953 aaKnown RBP eCLIP22.7■■□□□ 1.22
GTDC1-210ENST00000429978 PRR36Q9H6K5 1346 aa22.7■■□□□ 1.22
GTDC1-210ENST00000429978 LRP5O75197 1615 aa22.7■■□□□ 1.22
GTDC1-210ENST00000429978 PMFBP1Q8TBY8 1022 aa22.69■■□□□ 1.22
GTDC1-210ENST00000429978 ITSN1Q15811 1721 aa22.68■■□□□ 1.22
GTDC1-210ENST00000429978 TRAK1Q9UPV9 953 aa22.67■■□□□ 1.22
GTDC1-210ENST00000429978 ATP7BP35670 1465 aa22.66■■□□□ 1.22
GTDC1-210ENST00000429978 DISP2A7MBM2 1401 aa22.66■■□□□ 1.22
GTDC1-210ENST00000429978 ARHGEF28Q8N1W1 1705 aaKnown RBP22.66■■□□□ 1.22
GTDC1-210ENST00000429978 THSD7AQ9UPZ6 1657 aa22.66■■□□□ 1.22
GTDC1-210ENST00000429978 LMOD2Q6P5Q4 547 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms