RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 SAMD9Q5K651 1589 aa15.65■□□□□ 0.1
CPNE4-201ENST00000429747 MCM4P33991 863 aa15.65■□□□□ 0.1
CPNE4-201ENST00000429747 HSP90AA2PQ14568 343 aaPredicted RBP15.65■□□□□ 0.1
CPNE4-201ENST00000429747 STK31Q9BXU1 1019 aa15.65■□□□□ 0.1
CPNE4-201ENST00000429747 ATP10BO94823 1461 aa15.65■□□□□ 0.1
CPNE4-201ENST00000429747 PRKAR2BP31323 418 aa15.65■□□□□ 0.1
CPNE4-201ENST00000429747 MRE11P49959 708 aa15.64■□□□□ 0.09
CPNE4-201ENST00000429747 FAM43AQ8N2R8 423 aa15.64■□□□□ 0.09
CPNE4-201ENST00000429747 SPINK5Q9NQ38 1064 aaPredicted RBP15.64■□□□□ 0.09
CPNE4-201ENST00000429747 DNMT1P26358 1616 aaKnown RBP15.63■□□□□ 0.09
CPNE4-201ENST00000429747 COG3Q96JB2 828 aa15.63■□□□□ 0.09
CPNE4-201ENST00000429747 TBC1D2Q9BYX2 928 aa15.63■□□□□ 0.09
CPNE4-201ENST00000429747 API5Q9BZZ5 524 aaKnown RBP15.63■□□□□ 0.09
CPNE4-201ENST00000429747 LMOD2Q6P5Q4 547 aa15.63■□□□□ 0.09
CPNE4-201ENST00000429747 UHRF1BP1Q6BDS2 1440 aa15.62■□□□□ 0.09
CPNE4-201ENST00000429747 GNAI1P63096 354 aa15.61■□□□□ 0.09
CPNE4-201ENST00000429747 RILPL2Q969X0 211 aa15.61■□□□□ 0.09
CPNE4-201ENST00000429747 HDGFP51858 240 aaKnown RBP15.61■□□□□ 0.09
CPNE4-201ENST00000429747 KIAA1211Q6ZU35 1233 aa15.61■□□□□ 0.09
CPNE4-201ENST00000429747 TMEM57Q8N5G2 664 aa15.61■□□□□ 0.09
CPNE4-201ENST00000429747 SSH1Q8WYL5 1049 aa15.61■□□□□ 0.09
CPNE4-201ENST00000429747 PCDHB15Q9Y5E8 787 aa15.61■□□□□ 0.09
CPNE4-201ENST00000429747 SCAF11Q99590 1463 aaKnown RBP15.6■□□□□ 0.09
CPNE4-201ENST00000429747 MCTP1Q6DN14 999 aa15.6■□□□□ 0.09
CPNE4-201ENST00000429747 TMPOP42166 694 aaKnown RBP15.6■□□□□ 0.09
CPNE4-201ENST00000429747 PRAM1Q96QH2 718 aa15.6■□□□□ 0.09
CPNE4-201ENST00000429747 TNNQ9UQP3 1299 aa15.6■□□□□ 0.09
CPNE4-201ENST00000429747 FAM135AQ9P2D6 1515 aa15.59■□□□□ 0.09
CPNE4-201ENST00000429747 KIAA0556O60303 1618 aa15.59■□□□□ 0.09
CPNE4-201ENST00000429747 GOLGA6L4A6NEF3 574 aa15.59■□□□□ 0.09
CPNE4-201ENST00000429747 ARHGEF12Q9NZN5 1544 aa15.58■□□□□ 0.09
CPNE4-201ENST00000429747 GCC2Q8IWJ2 1684 aa15.58■□□□□ 0.08
CPNE4-201ENST00000429747 CDC45O75419 566 aa15.58■□□□□ 0.08
CPNE4-201ENST00000429747 SEC24BO95487 1268 aa15.58■□□□□ 0.08
CPNE4-201ENST00000429747 DISP1Q96F81 1524 aa15.58■□□□□ 0.08
CPNE4-201ENST00000429747 FGD1P98174 961 aa15.57■□□□□ 0.08
CPNE4-201ENST00000429747 SYAP1Q96A49 352 aaPredicted RBP15.57■□□□□ 0.08
CPNE4-201ENST00000429747 ADAMTS12P58397 1594 aa15.57■□□□□ 0.08
CPNE4-201ENST00000429747 CHD1LQ86WJ1 897 aa15.57■□□□□ 0.08
CPNE4-201ENST00000429747 LTV1Q96GA3 475 aaPredicted RBP15.57■□□□□ 0.08
CPNE4-201ENST00000429747 REC8O95072 547 aa15.57■□□□□ 0.08
CPNE4-201ENST00000429747 NECTIN2Q92692 538 aa15.57■□□□□ 0.08
CPNE4-201ENST00000429747 CABP1Q9NZU7 370 aa15.57■□□□□ 0.08
CPNE4-201ENST00000429747 CT47B1P0C2W7 299 aaPredicted RBP15.56■□□□□ 0.08
CPNE4-201ENST00000429747 THUMPD2Q9BTF0 503 aaKnown RBP15.56■□□□□ 0.08
CPNE4-201ENST00000429747 VSIG10Q8N0Z9 540 aa15.56■□□□□ 0.08
CPNE4-201ENST00000429747 KIAA2012Q0VF49 1180 aa15.56■□□□□ 0.08
CPNE4-201ENST00000429747 TAOK2Q9UL54 1235 aa15.56■□□□□ 0.08
CPNE4-201ENST00000429747 AMPHP49418 695 aa15.55■□□□□ 0.08
CPNE4-201ENST00000429747 KDM2BQ8NHM5 1336 aa15.55■□□□□ 0.08
CPNE4-201ENST00000429747 ABCA5Q8WWZ7 1642 aa15.55■□□□□ 0.08
CPNE4-201ENST00000429747 TRIM27P14373 513 aa15.55■□□□□ 0.08
CPNE4-201ENST00000429747 TWISTNBQ3B726 338 aaPredicted RBP15.55■□□□□ 0.08
CPNE4-201ENST00000429747 INTS3Q68E01 1043 aaKnown RBP15.55■□□□□ 0.08
CPNE4-201ENST00000429747 TBC1D32Q96NH3 1257 aa15.55■□□□□ 0.08
CPNE4-201ENST00000429747 RLBP1P12271 317 aa15.55■□□□□ 0.08
CPNE4-201ENST00000429747 ITSN2Q9NZM3 1697 aa15.54■□□□□ 0.08
CPNE4-201ENST00000429747 NASPP49321 788 aaPredicted RBP15.54■□□□□ 0.08
CPNE4-201ENST00000429747 DMRT2Q9Y5R5 561 aa15.54■□□□□ 0.08
CPNE4-201ENST00000429747 GRPEL1Q9HAV7 217 aa15.54■□□□□ 0.08
CPNE4-201ENST00000429747 NAP1L2Q9ULW6 460 aaPredicted RBP15.54■□□□□ 0.08
CPNE4-201ENST00000429747 NUCB2P80303 420 aa15.54■□□□□ 0.08
CPNE4-201ENST00000429747 CARD14Q9BXL6 1004 aa15.54■□□□□ 0.08
CPNE4-201ENST00000429747 COL17A1Q9UMD9 1497 aaPredicted RBP15.54■□□□□ 0.08
CPNE4-201ENST00000429747 NGDNQ8NEJ9 315 aaKnown RBP15.53■□□□□ 0.08
CPNE4-201ENST00000429747 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
CPNE4-201ENST00000429747 ANO2Q9NQ90 1003 aa15.53■□□□□ 0.08
CPNE4-201ENST00000429747 DENND4BO75064 1496 aaPredicted RBP15.53■□□□□ 0.08
CPNE4-201ENST00000429747 ADGRL2O95490 1459 aa15.53■□□□□ 0.08
CPNE4-201ENST00000429747 CAVIN1Q6NZI2 390 aaKnown RBP15.53■□□□□ 0.08
CPNE4-201ENST00000429747 GPRASP1Q5JY77 1395 aa15.52■□□□□ 0.08
CPNE4-201ENST00000429747 ZRSR1Q15695 479 aaKnown RBP15.52■□□□□ 0.08
CPNE4-201ENST00000429747 A2MP01023 1474 aa15.52■□□□□ 0.07
CPNE4-201ENST00000429747 ASXL1Q8IXJ9 1541 aa15.52■□□□□ 0.07
CPNE4-201ENST00000429747 DRC7Q8IY82 874 aa15.52■□□□□ 0.07
CPNE4-201ENST00000429747 SYCP2Q9BX26 1530 aa15.51■□□□□ 0.07
CPNE4-201ENST00000429747 CDK19Q9BWU1 502 aa15.51■□□□□ 0.07
CPNE4-201ENST00000429747 CHAF1AQ13111 956 aaPredicted RBP15.51■□□□□ 0.07
CPNE4-201ENST00000429747 K7ELQ4 463 aaPredicted RBP15.5■□□□□ 0.07
CPNE4-201ENST00000429747 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.5■□□□□ 0.07
CPNE4-201ENST00000429747 NUP160Q12769 1436 aa15.5■□□□□ 0.07
CPNE4-201ENST00000429747 RNF214Q8ND24 703 aa15.5■□□□□ 0.07
CPNE4-201ENST00000429747 RAPGEF3O95398 923 aa15.49■□□□□ 0.07
CPNE4-201ENST00000429747 FKBP5Q13451 457 aaPredicted RBP15.49■□□□□ 0.07
CPNE4-201ENST00000429747 SHANK2Q9UPX8 1470 aa15.48■□□□□ 0.07
CPNE4-201ENST00000429747 PRPF40AO75400 957 aaKnown RBP15.48■□□□□ 0.07
CPNE4-201ENST00000429747 KDM5BQ9UGL1 1544 aa15.48■□□□□ 0.07
CPNE4-201ENST00000429747 ESPNB1AK53 854 aa15.47■□□□□ 0.07
CPNE4-201ENST00000429747 RABEP1Q15276 862 aa15.47■□□□□ 0.07
CPNE4-201ENST00000429747 TSPYL4Q9UJ04 414 aa15.47■□□□□ 0.07
CPNE4-201ENST00000429747 NOS1P29475 1434 aa15.47■□□□□ 0.07
CPNE4-201ENST00000429747 PRKCSHP14314 528 aaPredicted RBP15.47■□□□□ 0.07
CPNE4-201ENST00000429747 FAM13BQ9NYF5 915 aa15.47■□□□□ 0.07
CPNE4-201ENST00000429747 NEK4P51957 841 aa15.47■□□□□ 0.07
CPNE4-201ENST00000429747 BLMP54132 1417 aaPredicted RBP15.47■□□□□ 0.07
CPNE4-201ENST00000429747 FCHSD2O94868 740 aa15.46■□□□□ 0.07
CPNE4-201ENST00000429747 PIK3C2GO75747 1445 aa15.46■□□□□ 0.07
CPNE4-201ENST00000429747 PHF14O94880 888 aa15.46■□□□□ 0.07
CPNE4-201ENST00000429747 CIZ1Q9ULV3 898 aaPredicted RBP15.45■□□□□ 0.06
CPNE4-201ENST00000429747 RPGRIP1LQ68CZ1 1315 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms