RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 SBNO2Q9Y2G9 1366 aa23.91■■□□□ 1.42
LINC00887-203ENST00000429578 PRAM1Q96QH2 718 aa23.9■■□□□ 1.42
LINC00887-203ENST00000429578 ROBO2Q9HCK4 1378 aa23.89■■□□□ 1.42
LINC00887-203ENST00000429578 HSPA1LP34931 641 aa23.89■■□□□ 1.41
LINC00887-203ENST00000429578 POGKQ9P215 609 aa23.88■■□□□ 1.41
LINC00887-203ENST00000429578 SLC24A1O60721 1099 aa23.87■■□□□ 1.41
LINC00887-203ENST00000429578 KCNA6P17658 529 aa23.87■■□□□ 1.41
LINC00887-203ENST00000429578 WAPLQ7Z5K2 1190 aa23.86■■□□□ 1.41
LINC00887-203ENST00000429578 PLEKHH1Q9ULM0 1364 aa23.85■■□□□ 1.41
LINC00887-203ENST00000429578 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.85■■□□□ 1.41
LINC00887-203ENST00000429578 NKTRP30414 1462 aaKnown RBP23.84■■□□□ 1.41
LINC00887-203ENST00000429578 SAFB2Q14151 953 aaKnown RBP eCLIP23.84■■□□□ 1.41
LINC00887-203ENST00000429578 C11orf95C9JLR9 678 aaPredicted RBP23.82■■□□□ 1.4
LINC00887-203ENST00000429578 TMF1P82094 1093 aa23.82■■□□□ 1.4
LINC00887-203ENST00000429578 XIRP1Q702N8 1843 aaKnown RBP23.82■■□□□ 1.4
LINC00887-203ENST00000429578 PROSER2Q86WR7 435 aaPredicted RBP23.81■■□□□ 1.4
LINC00887-203ENST00000429578 TMEM94Q12767 1356 aa23.81■■□□□ 1.4
LINC00887-203ENST00000429578 ADGRB2O60241 1585 aa23.8■■□□□ 1.4
LINC00887-203ENST00000429578 TULP4Q9NRJ4 1543 aa23.79■■□□□ 1.4
LINC00887-203ENST00000429578 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
LINC00887-203ENST00000429578 WASHC2AQ641Q2 1341 aa23.78■■□□□ 1.4
LINC00887-203ENST00000429578 MINK1Q8N4C8 1332 aaPredicted RBP23.78■■□□□ 1.4
LINC00887-203ENST00000429578 KIF7Q2M1P5 1343 aa23.78■■□□□ 1.4
LINC00887-203ENST00000429578 CCDC7Q96M83 1385 aa23.78■■□□□ 1.4
LINC00887-203ENST00000429578 RBM33Q96EV2 1170 aaKnown RBP23.77■■□□□ 1.4
LINC00887-203ENST00000429578 CDCA8Q53HL2 280 aa23.76■■□□□ 1.39
LINC00887-203ENST00000429578 ILDR2Q71H61 639 aa23.76■■□□□ 1.39
LINC00887-203ENST00000429578 EVC2Q86UK5 1308 aa23.76■■□□□ 1.39
LINC00887-203ENST00000429578 MYOM1P52179 1685 aa23.71■■□□□ 1.39
LINC00887-203ENST00000429578 PUS7Q96PZ0 661 aaKnown RBP23.7■■□□□ 1.39
LINC00887-203ENST00000429578 ADGRL3Q9HAR2 1447 aa23.7■■□□□ 1.38
LINC00887-203ENST00000429578 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
LINC00887-203ENST00000429578 CDC42BPGQ6DT37 1551 aa23.69■■□□□ 1.38
LINC00887-203ENST00000429578 MSH6P52701 1360 aa23.69■■□□□ 1.38
LINC00887-203ENST00000429578 WASLO00401 505 aaPredicted RBP23.69■■□□□ 1.38
LINC00887-203ENST00000429578 POLR3GLQ9BT43 218 aa23.69■■□□□ 1.38
LINC00887-203ENST00000429578 FMN2Q9NZ56 1722 aa23.68■■□□□ 1.38
LINC00887-203ENST00000429578 CDK19Q9BWU1 502 aa23.68■■□□□ 1.38
LINC00887-203ENST00000429578 RGPD8O14715 1765 aaPredicted RBP23.67■■□□□ 1.38
LINC00887-203ENST00000429578 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
LINC00887-203ENST00000429578 SRPK2P78362 688 aaKnown RBP23.67■■□□□ 1.38
LINC00887-203ENST00000429578 CABP2Q9NPB3 220 aa23.65■■□□□ 1.38
LINC00887-203ENST00000429578 ITSN1Q15811 1721 aa23.64■■□□□ 1.38
LINC00887-203ENST00000429578 C14orf37Q86TY3 774 aa23.64■■□□□ 1.37
LINC00887-203ENST00000429578 USP32Q8NFA0 1604 aa23.63■■□□□ 1.37
LINC00887-203ENST00000429578 ATAD2Q6PL18 1390 aa23.63■■□□□ 1.37
LINC00887-203ENST00000429578 DDX10Q13206 875 aaKnown RBP23.63■■□□□ 1.37
LINC00887-203ENST00000429578 TOPAZ1Q8N9V7 1692 aa23.62■■□□□ 1.37
LINC00887-203ENST00000429578 C19orf44Q9H6X5 657 aa23.61■■□□□ 1.37
LINC00887-203ENST00000429578 ATP7BP35670 1465 aa23.61■■□□□ 1.37
LINC00887-203ENST00000429578 ROBO1Q9Y6N7 1651 aa23.6■■□□□ 1.37
LINC00887-203ENST00000429578 SLAIN2Q9P270 581 aa23.59■■□□□ 1.37
LINC00887-203ENST00000429578 DCCP43146 1447 aa23.59■■□□□ 1.37
LINC00887-203ENST00000429578 NINLQ9Y2I6 1382 aa23.58■■□□□ 1.37
LINC00887-203ENST00000429578 ANKARQ7Z5J8 1434 aa23.58■■□□□ 1.36
LINC00887-203ENST00000429578 SOCS7O14512 581 aa23.57■■□□□ 1.36
LINC00887-203ENST00000429578 NUDT16Q96DE0 195 aaKnown RBP23.57■■□□□ 1.36
LINC00887-203ENST00000429578 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
LINC00887-203ENST00000429578 PRR36Q9H6K5 1346 aa23.56■■□□□ 1.36
LINC00887-203ENST00000429578 TMC1Q8TDI8 760 aa23.55■■□□□ 1.36
LINC00887-203ENST00000429578 CCDC61Q9Y6R9 512 aa23.55■■□□□ 1.36
LINC00887-203ENST00000429578 SLC12A5Q9H2X9 1139 aa23.54■■□□□ 1.36
LINC00887-203ENST00000429578 PPIP5K1Q6PFW1 1433 aa23.54■■□□□ 1.36
LINC00887-203ENST00000429578 AKAP12Q02952 1782 aa23.54■■□□□ 1.36
LINC00887-203ENST00000429578 NUTM2FA1L443 756 aa23.53■■□□□ 1.36
LINC00887-203ENST00000429578 ATF3P18847 181 aa23.53■■□□□ 1.36
LINC00887-203ENST00000429578 CADPS2Q86UW7 1296 aa23.53■■□□□ 1.36
LINC00887-203ENST00000429578 CABP1Q9NZU7 370 aa23.51■■□□□ 1.35
LINC00887-203ENST00000429578 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
LINC00887-203ENST00000429578 PANK3Q9H999 370 aa23.5■■□□□ 1.35
LINC00887-203ENST00000429578 CD163L1Q9NR16 1453 aa23.49■■□□□ 1.35
LINC00887-203ENST00000429578 MON2Q7Z3U7 1717 aa23.49■■□□□ 1.35
LINC00887-203ENST00000429578 ANKRD36BQ8N2N9 1353 aa23.49■■□□□ 1.35
LINC00887-203ENST00000429578 MST1RQ04912 1400 aa23.48■■□□□ 1.35
LINC00887-203ENST00000429578 TERF2IPQ9NYB0 399 aa23.47■■□□□ 1.35
LINC00887-203ENST00000429578 PHLPP1O60346 1717 aa23.46■■□□□ 1.35
LINC00887-203ENST00000429578 C1orf167Q5SNV9 1468 aa23.46■■□□□ 1.35
LINC00887-203ENST00000429578 PLEKHG3A1L390 1219 aa23.46■■□□□ 1.35
LINC00887-203ENST00000429578 KIF1AQ12756 1690 aa23.46■■□□□ 1.35
LINC00887-203ENST00000429578 A0A1W2PP64 1363 aa23.45■■□□□ 1.35
LINC00887-203ENST00000429578 CPSF1Q10570 1443 aaKnown RBP23.45■■□□□ 1.34
LINC00887-203ENST00000429578 PER1O15534 1290 aaPredicted RBP23.44■■□□□ 1.34
LINC00887-203ENST00000429578 HDGFL2Q7Z4V5 671 aaPredicted RBP23.43■■□□□ 1.34
LINC00887-203ENST00000429578 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
LINC00887-203ENST00000429578 ESCO1Q5FWF5 840 aa23.42■■□□□ 1.34
LINC00887-203ENST00000429578 CARD14Q9BXL6 1004 aa23.42■■□□□ 1.34
LINC00887-203ENST00000429578 ACEP12821 1306 aa23.41■■□□□ 1.34
LINC00887-203ENST00000429578 PMFBP1Q8TBY8 1022 aa23.41■■□□□ 1.34
LINC00887-203ENST00000429578 ZNF692Q9BU19 519 aaPredicted RBP23.4■■□□□ 1.34
LINC00887-203ENST00000429578 PHF8Q9UPP1 1060 aa23.4■■□□□ 1.34
LINC00887-203ENST00000429578 JCADQ9P266 1359 aa23.4■■□□□ 1.34
LINC00887-203ENST00000429578 NRKQ7Z2Y5 1582 aa23.4■■□□□ 1.34
LINC00887-203ENST00000429578 ORAI2Q96SN7 254 aa23.39■■□□□ 1.34
LINC00887-203ENST00000429578 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.34
LINC00887-203ENST00000429578 KIF20BQ96Q89 1820 aa23.39■■□□□ 1.34
LINC00887-203ENST00000429578 KTN1Q86UP2 1357 aaKnown RBP23.39■■□□□ 1.34
LINC00887-203ENST00000429578 NSD3Q9BZ95 1437 aa23.39■■□□□ 1.34
LINC00887-203ENST00000429578 COL16A1Q07092 1604 aaPredicted RBP23.38■■□□□ 1.33
LINC00887-203ENST00000429578 BRINP3Q76B58 766 aa23.38■■□□□ 1.33
LINC00887-203ENST00000429578 NGDNQ8NEJ9 315 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms