RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 CABP2Q9NPB3 220 aa21.52■■□□□ 1.04
MBD4-203ENST00000429544 YTHDC2Q9H6S0 1430 aaKnown RBP21.52■■□□□ 1.03
MBD4-203ENST00000429544 MORC1Q86VD1 984 aa21.51■■□□□ 1.03
MBD4-203ENST00000429544 A2ML1A8K2U0 1454 aa21.5■■□□□ 1.03
MBD4-203ENST00000429544 CCDC146Q8IYE0 955 aa21.5■■□□□ 1.03
MBD4-203ENST00000429544 RBM19Q9Y4C8 960 aaKnown RBP21.49■■□□□ 1.03
MBD4-203ENST00000429544 ANKRD36BQ8N2N9 1353 aa21.49■■□□□ 1.03
MBD4-203ENST00000429544 TNNT2P45379 298 aaPredicted RBP21.48■■□□□ 1.03
MBD4-203ENST00000429544 CCDC136Q96JN2 1154 aa21.47■■□□□ 1.03
MBD4-203ENST00000429544 PRAM1Q96QH2 718 aa21.47■■□□□ 1.03
MBD4-203ENST00000429544 CGNL1Q0VF96 1302 aa21.47■■□□□ 1.03
MBD4-203ENST00000429544 POLR3AO14802 1390 aaPredicted RBP21.47■■□□□ 1.03
MBD4-203ENST00000429544 RIMS2Q9UQ26 1411 aa21.47■■□□□ 1.03
MBD4-203ENST00000429544 MINK1Q8N4C8 1332 aaPredicted RBP21.46■■□□□ 1.03
MBD4-203ENST00000429544 SHPRHQ149N8 1683 aa21.46■■□□□ 1.03
MBD4-203ENST00000429544 POGKQ9P215 609 aa21.46■■□□□ 1.03
MBD4-203ENST00000429544 SRPK2P78362 688 aaKnown RBP21.46■■□□□ 1.03
MBD4-203ENST00000429544 ZNF521Q96K83 1311 aa21.45■■□□□ 1.02
MBD4-203ENST00000429544 ESF1Q9H501 851 aaKnown RBP21.44■■□□□ 1.02
MBD4-203ENST00000429544 SETD1AO15047 1707 aaKnown RBP21.44■■□□□ 1.02
MBD4-203ENST00000429544 APAF1O14727 1248 aa21.42■■□□□ 1.02
MBD4-203ENST00000429544 EXOC6Q8TAG9 804 aa21.42■■□□□ 1.02
MBD4-203ENST00000429544 GOLGA2Q08379 1002 aa21.41■■□□□ 1.02
MBD4-203ENST00000429544 ZMYM3Q14202 1370 aa21.41■■□□□ 1.02
MBD4-203ENST00000429544 NINLQ9Y2I6 1382 aa21.41■■□□□ 1.02
MBD4-203ENST00000429544 A0A1W2PP64 1363 aa21.41■■□□□ 1.02
MBD4-203ENST00000429544 NSD2O96028 1365 aa21.41■■□□□ 1.02
MBD4-203ENST00000429544 ATAD2Q6PL18 1390 aa21.4■■□□□ 1.02
MBD4-203ENST00000429544 DUSP27Q5VZP5 1158 aa21.4■■□□□ 1.02
MBD4-203ENST00000429544 PLIN1O60240 522 aa21.38■■□□□ 1.01
MBD4-203ENST00000429544 NRXN3Q9Y4C0 1643 aa21.38■■□□□ 1.01
MBD4-203ENST00000429544 DLC1Q96QB1 1528 aa21.37■■□□□ 1.01
MBD4-203ENST00000429544 ABCC11Q96J66 1382 aa21.37■■□□□ 1.01
MBD4-203ENST00000429544 MTHFSP49914 203 aa21.36■■□□□ 1.01
MBD4-203ENST00000429544 SLFN5Q08AF3 891 aa21.35■■□□□ 1.01
MBD4-203ENST00000429544 CDK19Q9BWU1 502 aa21.35■■□□□ 1.01
MBD4-203ENST00000429544 ANKRD26Q9UPS8 1709 aa21.35■■□□□ 1.01
MBD4-203ENST00000429544 CD163L1Q9NR16 1453 aa21.34■■□□□ 1.01
MBD4-203ENST00000429544 TNRQ92752 1358 aa21.34■■□□□ 1.01
MBD4-203ENST00000429544 CFAP53Q96M91 514 aa21.34■■□□□ 1.01
MBD4-203ENST00000429544 TERF2IPQ9NYB0 399 aa21.33■■□□□ 1.01
MBD4-203ENST00000429544 WAPLQ7Z5K2 1190 aa21.32■■□□□ 1
MBD4-203ENST00000429544 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.32■■□□□ 1
MBD4-203ENST00000429544 SPINK5Q9NQ38 1064 aaPredicted RBP21.32■■□□□ 1
MBD4-203ENST00000429544 TRMT2AQ8IZ69 625 aaKnown RBP21.31■■□□□ 1
MBD4-203ENST00000429544 NGEFQ8N5V2 710 aa21.31■■□□□ 1
MBD4-203ENST00000429544 GGNBP2Q9H3C7 697 aa21.31■■□□□ 1
MBD4-203ENST00000429544 UBR1Q8IWV7 1749 aa21.3■■□□□ 1
MBD4-203ENST00000429544 CRBNQ96SW2 442 aa21.3■■□□□ 1
MBD4-203ENST00000429544 KIF20BQ96Q89 1820 aa21.3■■□□□ 1
MBD4-203ENST00000429544 IQSEC2Q5JU85 1478 aa21.29■■□□□ 1
MBD4-203ENST00000429544 HDGFL2Q7Z4V5 671 aaPredicted RBP21.29■■□□□ 1
MBD4-203ENST00000429544 RUNDC1Q96C34 613 aa21.29■■□□□ 1
MBD4-203ENST00000429544 DMRT2Q9Y5R5 561 aa21.29■■□□□ 1
MBD4-203ENST00000429544 METP08581 1390 aa21.28■■□□□ 1
MBD4-203ENST00000429544 NKTRP30414 1462 aaKnown RBP21.28■■□□□ 1
MBD4-203ENST00000429544 E9PSI1 815 aa21.28■■□□□ 1
MBD4-203ENST00000429544 CABP1Q9NZU7 370 aa21.28■■□□□ 1
MBD4-203ENST00000429544 NLRP1Q9C000 1473 aa21.27■■□□□ 1
MBD4-203ENST00000429544 KNDC1Q76NI1 1749 aa21.27■□□□□ 0.99
MBD4-203ENST00000429544 FYB1O15117 783 aa21.26■□□□□ 0.99
MBD4-203ENST00000429544 C20orf194Q5TEA3 1177 aa21.26■□□□□ 0.99
MBD4-203ENST00000429544 MED14O60244 1454 aa21.26■□□□□ 0.99
MBD4-203ENST00000429544 WWC1Q8IX03 1113 aa21.26■□□□□ 0.99
MBD4-203ENST00000429544 RRP7AQ9Y3A4 280 aaKnown RBP21.25■□□□□ 0.99
MBD4-203ENST00000429544 NEUROD2Q15784 382 aa21.24■□□□□ 0.99
MBD4-203ENST00000429544 TCP11L2Q8N4U5 519 aa21.24■□□□□ 0.99
MBD4-203ENST00000429544 HDGFP51858 240 aaKnown RBP21.23■□□□□ 0.99
MBD4-203ENST00000429544 TMEM2Q9UHN6 1383 aa21.23■□□□□ 0.99
MBD4-203ENST00000429544 TXNDC2Q86VQ3 553 aa21.22■□□□□ 0.99
MBD4-203ENST00000429544 ATP7BP35670 1465 aa21.22■□□□□ 0.99
MBD4-203ENST00000429544 U2AF1L5P0DN76 240 aaPredicted RBP21.22■□□□□ 0.99
MBD4-203ENST00000429544 U2AF1Q01081 240 aaKnown RBP eCLIP21.22■□□□□ 0.99
MBD4-203ENST00000429544 COL3A1P02461 1466 aaPredicted RBP21.21■□□□□ 0.99
MBD4-203ENST00000429544 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.21■□□□□ 0.99
MBD4-203ENST00000429544 CPS1P31327 1500 aa21.2■□□□□ 0.98
MBD4-203ENST00000429544 AEBP2Q6ZN18 517 aaPredicted RBP21.19■□□□□ 0.98
MBD4-203ENST00000429544 WASLO00401 505 aaPredicted RBP21.19■□□□□ 0.98
MBD4-203ENST00000429544 ADGRB2O60241 1585 aa21.19■□□□□ 0.98
MBD4-203ENST00000429544 TECPR2O15040 1411 aa21.18■□□□□ 0.98
MBD4-203ENST00000429544 FANCIQ9NVI1 1328 aa21.18■□□□□ 0.98
MBD4-203ENST00000429544 FAM135BQ49AJ0 1406 aa21.18■□□□□ 0.98
MBD4-203ENST00000429544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.18■□□□□ 0.98
MBD4-203ENST00000429544 CEBPAP49715 358 aaPredicted RBP21.17■□□□□ 0.98
MBD4-203ENST00000429544 PPIP5K1Q6PFW1 1433 aa21.17■□□□□ 0.98
MBD4-203ENST00000429544 U2SURPO15042 1029 aaKnown RBP21.17■□□□□ 0.98
MBD4-203ENST00000429544 PHF23Q9BUL5 403 aaPredicted RBP21.17■□□□□ 0.98
MBD4-203ENST00000429544 C3P01024 1663 aa21.17■□□□□ 0.98
MBD4-203ENST00000429544 BCAR3O75815 825 aa21.16■□□□□ 0.98
MBD4-203ENST00000429544 FER1L4A9Z1Z3 1794 aa21.15■□□□□ 0.98
MBD4-203ENST00000429544 ADAMTS13Q76LX8 1427 aa21.15■□□□□ 0.98
MBD4-203ENST00000429544 WDR63Q8IWG1 891 aa21.14■□□□□ 0.97
MBD4-203ENST00000429544 SIRT1Q96EB6 747 aa21.14■□□□□ 0.97
MBD4-203ENST00000429544 CCDC27Q2M243 656 aa21.13■□□□□ 0.97
MBD4-203ENST00000429544 LTKP29376 864 aa21.13■□□□□ 0.97
MBD4-203ENST00000429544 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
MBD4-203ENST00000429544 CPSF1Q10570 1443 aaKnown RBP21.12■□□□□ 0.97
MBD4-203ENST00000429544 CDC42BPGQ6DT37 1551 aa21.12■□□□□ 0.97
MBD4-203ENST00000429544 NUDT16Q96DE0 195 aaKnown RBP21.12■□□□□ 0.97
MBD4-203ENST00000429544 PLEKHG1Q9ULL1 1385 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms