RNA–Protein interactions for RNA: ENST00000429040.5

SLC39A1-207, Transcript of solute carrier family 39 member 1, humanhuman

TSL 2

Gene SLC39A1, Length 1,141 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-207ENST00000429040 NUTM2AQ8IVF1 878 aaPredicted RBP24.51■■□□□ 1.51
SLC39A1-207ENST00000429040 TMEM132EQ6IEE7 984 aa24.5■■□□□ 1.51
SLC39A1-207ENST00000429040 ORAI2Q96SN7 254 aa24.5■■□□□ 1.51
SLC39A1-207ENST00000429040 LRPPRCP42704 1394 aaKnown RBP24.5■■□□□ 1.51
SLC39A1-207ENST00000429040 TECPR2O15040 1411 aa24.49■■□□□ 1.51
SLC39A1-207ENST00000429040 ZNF772Q68DY9 489 aaPredicted RBP24.48■■□□□ 1.51
SLC39A1-207ENST00000429040 ABCC11Q96J66 1382 aa24.48■■□□□ 1.51
SLC39A1-207ENST00000429040 WAPLQ7Z5K2 1190 aa24.47■■□□□ 1.51
SLC39A1-207ENST00000429040 NEUROD1Q13562 356 aa24.46■■□□□ 1.51
SLC39A1-207ENST00000429040 TIMELESSQ9UNS1 1208 aa24.46■■□□□ 1.51
SLC39A1-207ENST00000429040 LAMC1P11047 1609 aa24.46■■□□□ 1.51
SLC39A1-207ENST00000429040 CDC42BPGQ6DT37 1551 aa24.46■■□□□ 1.51
SLC39A1-207ENST00000429040 PNPLA6Q8IY17 1366 aa24.45■■□□□ 1.5
SLC39A1-207ENST00000429040 C14orf93Q9H972 538 aaKnown RBP24.45■■□□□ 1.5
SLC39A1-207ENST00000429040 KNDC1Q76NI1 1749 aa24.44■■□□□ 1.5
SLC39A1-207ENST00000429040 SIN3AQ96ST3 1273 aa24.44■■□□□ 1.5
SLC39A1-207ENST00000429040 YTHDC2Q9H6S0 1430 aaKnown RBP24.44■■□□□ 1.5
SLC39A1-207ENST00000429040 TONSLQ96HA7 1378 aa24.43■■□□□ 1.5
SLC39A1-207ENST00000429040 SOS2Q07890 1332 aaPredicted RBP24.43■■□□□ 1.5
SLC39A1-207ENST00000429040 MYOM2P54296 1465 aa24.43■■□□□ 1.5
SLC39A1-207ENST00000429040 NRXN1Q9ULB1 1477 aa24.43■■□□□ 1.5
SLC39A1-207ENST00000429040 ESCO1Q5FWF5 840 aa24.42■■□□□ 1.5
SLC39A1-207ENST00000429040 PLEKHH1Q9ULM0 1364 aa24.42■■□□□ 1.5
SLC39A1-207ENST00000429040 CFAP70Q5T0N1 1121 aa24.41■■□□□ 1.5
SLC39A1-207ENST00000429040 SIRT1Q96EB6 747 aa24.4■■□□□ 1.5
SLC39A1-207ENST00000429040 AFF2P51816 1311 aa24.38■■□□□ 1.49
SLC39A1-207ENST00000429040 NPHP3Q7Z494 1330 aa24.37■■□□□ 1.49
SLC39A1-207ENST00000429040 NUTM2FA1L443 756 aa24.37■■□□□ 1.49
SLC39A1-207ENST00000429040 C8orf37Q96NL8 207 aa24.36■■□□□ 1.49
SLC39A1-207ENST00000429040 RXRBP28702 533 aa24.34■■□□□ 1.49
SLC39A1-207ENST00000429040 FOXO3O43524 673 aa24.33■■□□□ 1.49
SLC39A1-207ENST00000429040 ADAMTS2O95450 1211 aa24.33■■□□□ 1.49
SLC39A1-207ENST00000429040 FMN2Q9NZ56 1722 aa24.32■■□□□ 1.48
SLC39A1-207ENST00000429040 DCAF11Q8TEB1 546 aa24.31■■□□□ 1.48
SLC39A1-207ENST00000429040 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
SLC39A1-207ENST00000429040 XPCQ01831 940 aaPredicted RBP24.3■■□□□ 1.48
SLC39A1-207ENST00000429040 NGLY1Q96IV0 654 aa24.3■■□□□ 1.48
SLC39A1-207ENST00000429040 PRAM1Q96QH2 718 aa24.3■■□□□ 1.48
SLC39A1-207ENST00000429040 PXDNQ92626 1479 aa24.3■■□□□ 1.48
SLC39A1-207ENST00000429040 COL22A1Q8NFW1 1626 aaPredicted RBP24.28■■□□□ 1.48
SLC39A1-207ENST00000429040 SAFB2Q14151 953 aaKnown RBP eCLIP24.28■■□□□ 1.48
SLC39A1-207ENST00000429040 STAC3Q96MF2 364 aa24.28■■□□□ 1.48
SLC39A1-207ENST00000429040 POGKQ9P215 609 aa24.28■■□□□ 1.48
SLC39A1-207ENST00000429040 DLC1Q96QB1 1528 aa24.27■■□□□ 1.48
SLC39A1-207ENST00000429040 QTRT2Q9H974 415 aaKnown RBP24.27■■□□□ 1.48
SLC39A1-207ENST00000429040 CDK12Q9NYV4 1490 aaPredicted RBP24.26■■□□□ 1.47
SLC39A1-207ENST00000429040 ADGRB1O14514 1584 aa24.25■■□□□ 1.47
SLC39A1-207ENST00000429040 KIF1AQ12756 1690 aa24.25■■□□□ 1.47
SLC39A1-207ENST00000429040 RBM6P78332 1123 aaKnown RBP24.23■■□□□ 1.47
SLC39A1-207ENST00000429040 L3MBTL2Q969R5 705 aa24.23■■□□□ 1.47
SLC39A1-207ENST00000429040 TRAK1Q9UPV9 953 aa24.23■■□□□ 1.47
SLC39A1-207ENST00000429040 KRT28Q7Z3Y7 464 aa24.22■■□□□ 1.47
SLC39A1-207ENST00000429040 PHF8Q9UPP1 1060 aa24.22■■□□□ 1.47
SLC39A1-207ENST00000429040 RGPD8O14715 1765 aaPredicted RBP24.21■■□□□ 1.47
SLC39A1-207ENST00000429040 USP21Q9UK80 565 aa24.21■■□□□ 1.47
SLC39A1-207ENST00000429040 FNBP4Q8N3X1 1017 aaPredicted RBP24.2■■□□□ 1.46
SLC39A1-207ENST00000429040 SPATA31A3Q5VYP0 1347 aa24.19■■□□□ 1.46
SLC39A1-207ENST00000429040 PSME1Q06323 249 aa24.17■■□□□ 1.46
SLC39A1-207ENST00000429040 UPF1Q92900 1129 aaKnown RBP eCLIP24.17■■□□□ 1.46
SLC39A1-207ENST00000429040 TRPC5Q9UL62 973 aaPredicted RBP24.17■■□□□ 1.46
SLC39A1-207ENST00000429040 ADGRB2O60241 1585 aa24.16■■□□□ 1.46
SLC39A1-207ENST00000429040 ANKARQ7Z5J8 1434 aa24.16■■□□□ 1.46
SLC39A1-207ENST00000429040 MARF1Q9Y4F3 1742 aaKnown RBP24.15■■□□□ 1.46
SLC39A1-207ENST00000429040 HIRIP3Q9BW71 556 aaPredicted RBP24.15■■□□□ 1.46
SLC39A1-207ENST00000429040 RGS12O14924 1447 aa24.15■■□□□ 1.46
SLC39A1-207ENST00000429040 MINK1Q8N4C8 1332 aaPredicted RBP24.14■■□□□ 1.46
SLC39A1-207ENST00000429040 USP32Q8NFA0 1604 aa24.13■■□□□ 1.45
SLC39A1-207ENST00000429040 TNS3Q68CZ2 1445 aa24.12■■□□□ 1.45
SLC39A1-207ENST00000429040 PMFBP1Q8TBY8 1022 aa24.12■■□□□ 1.45
SLC39A1-207ENST00000429040 EIF3AQ14152 1382 aaKnown RBP24.12■■□□□ 1.45
SLC39A1-207ENST00000429040 ATRNO75882 1429 aa24.11■■□□□ 1.45
SLC39A1-207ENST00000429040 SBNO1A3KN83 1393 aa24.11■■□□□ 1.45
SLC39A1-207ENST00000429040 WASLO00401 505 aaPredicted RBP24.1■■□□□ 1.45
SLC39A1-207ENST00000429040 BCL9LQ86UU0 1499 aa24.09■■□□□ 1.45
SLC39A1-207ENST00000429040 HAP1P54257 671 aaPredicted RBP24.08■■□□□ 1.45
SLC39A1-207ENST00000429040 LMOD2Q6P5Q4 547 aa24.08■■□□□ 1.45
SLC39A1-207ENST00000429040 PRR36Q9H6K5 1346 aa24.08■■□□□ 1.44
SLC39A1-207ENST00000429040 ARHGEF28Q8N1W1 1705 aaKnown RBP24.07■■□□□ 1.44
SLC39A1-207ENST00000429040 TULP4Q9NRJ4 1543 aa24.07■■□□□ 1.44
SLC39A1-207ENST00000429040 ARHGEF10O15013 1369 aa24.06■■□□□ 1.44
SLC39A1-207ENST00000429040 PLEKHG5O94827 1062 aa24.05■■□□□ 1.44
SLC39A1-207ENST00000429040 CABLES1Q8TDN4 633 aa24.05■■□□□ 1.44
SLC39A1-207ENST00000429040 KIAA1210Q9ULL0 1709 aa24.04■■□□□ 1.44
SLC39A1-207ENST00000429040 GPRASP1Q5JY77 1395 aa24.03■■□□□ 1.44
SLC39A1-207ENST00000429040 UNC5CLQ8IV45 518 aa24.03■■□□□ 1.44
SLC39A1-207ENST00000429040 GJD4Q96KN9 370 aaPredicted RBP24.03■■□□□ 1.44
SLC39A1-207ENST00000429040 SLIT2O94813 1529 aa24.03■■□□□ 1.44
SLC39A1-207ENST00000429040 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.01■■□□□ 1.43
SLC39A1-207ENST00000429040 NBPF1Q3BBV0 1214 aa24■■□□□ 1.43
SLC39A1-207ENST00000429040 NGDNQ8NEJ9 315 aaKnown RBP24■■□□□ 1.43
SLC39A1-207ENST00000429040 TRPM3Q9HCF6 1732 aaPredicted RBP24■■□□□ 1.43
SLC39A1-207ENST00000429040 RALGAPBQ86X10 1494 aa24■■□□□ 1.43
SLC39A1-207ENST00000429040 NUDT16Q96DE0 195 aaKnown RBP23.99■■□□□ 1.43
SLC39A1-207ENST00000429040 ATAD2Q6PL18 1390 aa23.99■■□□□ 1.43
SLC39A1-207ENST00000429040 CDK19Q9BWU1 502 aa23.98■■□□□ 1.43
SLC39A1-207ENST00000429040 ABCA3Q99758 1704 aa23.98■■□□□ 1.43
SLC39A1-207ENST00000429040 NBPF8Q3BBV2 869 aa23.97■■□□□ 1.43
SLC39A1-207ENST00000429040 ITSN1Q15811 1721 aa23.96■■□□□ 1.43
SLC39A1-207ENST00000429040 ATP7BP35670 1465 aa23.96■■□□□ 1.43
SLC39A1-207ENST00000429040 ALS2Q96Q42 1657 aa23.95■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms