RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PRAM1Q96QH2 718 aa12.37□□□□□ -0.43
SMC6-204ENST00000428868 ABCC11Q96J66 1382 aa12.37□□□□□ -0.43
SMC6-204ENST00000428868 ROBO2Q9HCK4 1378 aa12.37□□□□□ -0.43
SMC6-204ENST00000428868 ADGRB2O60241 1585 aa12.37□□□□□ -0.43
SMC6-204ENST00000428868 NWD1Q149M9 1564 aa12.37□□□□□ -0.43
SMC6-204ENST00000428868 XIRP1Q702N8 1843 aaKnown RBP12.37□□□□□ -0.43
SMC6-204ENST00000428868 TOPAZ1Q8N9V7 1692 aa12.36□□□□□ -0.43
SMC6-204ENST00000428868 TMF1P82094 1093 aa12.36□□□□□ -0.43
SMC6-204ENST00000428868 WAPLQ7Z5K2 1190 aa12.36□□□□□ -0.43
SMC6-204ENST00000428868 ITSN1Q15811 1721 aa12.35□□□□□ -0.43
SMC6-204ENST00000428868 ANKLE2Q86XL3 938 aa12.35□□□□□ -0.43
SMC6-204ENST00000428868 USP32Q8NFA0 1604 aa12.35□□□□□ -0.43
SMC6-204ENST00000428868 AKAP12Q02952 1782 aa12.35□□□□□ -0.43
SMC6-204ENST00000428868 MINK1Q8N4C8 1332 aaPredicted RBP12.35□□□□□ -0.43
SMC6-204ENST00000428868 TBX22Q9Y458 520 aa12.34□□□□□ -0.43
SMC6-204ENST00000428868 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
SMC6-204ENST00000428868 PTCH1Q13635 1447 aa12.33□□□□□ -0.44
SMC6-204ENST00000428868 FAM135BQ49AJ0 1406 aa12.33□□□□□ -0.44
SMC6-204ENST00000428868 POGKQ9P215 609 aa12.32□□□□□ -0.44
SMC6-204ENST00000428868 KIF20BQ96Q89 1820 aa12.32□□□□□ -0.44
SMC6-204ENST00000428868 MON2Q7Z3U7 1717 aa12.31□□□□□ -0.44
SMC6-204ENST00000428868 AMOTL2Q9Y2J4 779 aa12.3□□□□□ -0.44
SMC6-204ENST00000428868 ANKRD26Q9UPS8 1709 aa12.3□□□□□ -0.44
SMC6-204ENST00000428868 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
SMC6-204ENST00000428868 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
SMC6-204ENST00000428868 KCNA6P17658 529 aa12.28□□□□□ -0.44
SMC6-204ENST00000428868 EVC2Q86UK5 1308 aa12.28□□□□□ -0.44
SMC6-204ENST00000428868 ATP7BP35670 1465 aa12.27□□□□□ -0.44
SMC6-204ENST00000428868 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.44
SMC6-204ENST00000428868 SIRT1Q96EB6 747 aa12.27□□□□□ -0.45
SMC6-204ENST00000428868 PANK3Q9H999 370 aa12.27□□□□□ -0.45
SMC6-204ENST00000428868 CNGB1Q14028 1251 aaPredicted RBP12.26□□□□□ -0.45
SMC6-204ENST00000428868 CDK19Q9BWU1 502 aa12.26□□□□□ -0.45
SMC6-204ENST00000428868 DMRT2Q9Y5R5 561 aa12.26□□□□□ -0.45
SMC6-204ENST00000428868 CDC42BPGQ6DT37 1551 aa12.26□□□□□ -0.45
SMC6-204ENST00000428868 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
SMC6-204ENST00000428868 PER1O15534 1290 aaPredicted RBP12.25□□□□□ -0.45
SMC6-204ENST00000428868 CDCA8Q53HL2 280 aa12.25□□□□□ -0.45
SMC6-204ENST00000428868 RBM33Q96EV2 1170 aaKnown RBP12.25□□□□□ -0.45
SMC6-204ENST00000428868 SLC12A5Q9H2X9 1139 aa12.25□□□□□ -0.45
SMC6-204ENST00000428868 NKTRP30414 1462 aaKnown RBP12.24□□□□□ -0.45
SMC6-204ENST00000428868 SRPK2P78362 688 aaKnown RBP12.24□□□□□ -0.45
SMC6-204ENST00000428868 PRR36Q9H6K5 1346 aa12.24□□□□□ -0.45
SMC6-204ENST00000428868 WASLO00401 505 aaPredicted RBP12.23□□□□□ -0.45
SMC6-204ENST00000428868 ANP32CO43423 234 aa12.23□□□□□ -0.45
SMC6-204ENST00000428868 NSD3Q9BZ95 1437 aa12.22□□□□□ -0.45
SMC6-204ENST00000428868 A0A1W2PP64 1363 aa12.22□□□□□ -0.45
SMC6-204ENST00000428868 TMC1Q8TDI8 760 aa12.22□□□□□ -0.45
SMC6-204ENST00000428868 CARD14Q9BXL6 1004 aa12.22□□□□□ -0.45
SMC6-204ENST00000428868 PRKRIP1Q9H875 184 aaPredicted RBP12.22□□□□□ -0.45
SMC6-204ENST00000428868 ATAD2Q6PL18 1390 aa12.21□□□□□ -0.45
SMC6-204ENST00000428868 MARF1Q9Y4F3 1742 aaKnown RBP12.21□□□□□ -0.45
SMC6-204ENST00000428868 SLC24A1O60721 1099 aa12.21□□□□□ -0.45
SMC6-204ENST00000428868 PUS7Q96PZ0 661 aaKnown RBP12.21□□□□□ -0.45
SMC6-204ENST00000428868 PPIP5K1Q6PFW1 1433 aa12.2□□□□□ -0.46
SMC6-204ENST00000428868 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
SMC6-204ENST00000428868 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
SMC6-204ENST00000428868 CCDC184Q52MB2 194 aa12.2□□□□□ -0.46
SMC6-204ENST00000428868 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
SMC6-204ENST00000428868 PARD3Q8TEW0 1356 aa12.19□□□□□ -0.46
SMC6-204ENST00000428868 MAP2P11137 1827 aaKnown RBP12.19□□□□□ -0.46
SMC6-204ENST00000428868 AMER1Q5JTC6 1135 aaPredicted RBP12.18□□□□□ -0.46
SMC6-204ENST00000428868 CC2D1BQ5T0F9 858 aaKnown RBP12.18□□□□□ -0.46
SMC6-204ENST00000428868 NUDT16Q96DE0 195 aaKnown RBP12.18□□□□□ -0.46
SMC6-204ENST00000428868 CABP1Q9NZU7 370 aa12.18□□□□□ -0.46
SMC6-204ENST00000428868 NINLQ9Y2I6 1382 aa12.18□□□□□ -0.46
SMC6-204ENST00000428868 KTN1Q86UP2 1357 aaKnown RBP12.17□□□□□ -0.46
SMC6-204ENST00000428868 PIK3C2AO00443 1686 aa12.16□□□□□ -0.46
SMC6-204ENST00000428868 CPSF1Q10570 1443 aaKnown RBP12.16□□□□□ -0.46
SMC6-204ENST00000428868 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
SMC6-204ENST00000428868 ZNF335Q9H4Z2 1342 aaPredicted RBP12.15□□□□□ -0.46
SMC6-204ENST00000428868 KNSTRNQ9Y448 316 aa12.15□□□□□ -0.46
SMC6-204ENST00000428868 SHPRHQ149N8 1683 aa12.15□□□□□ -0.46
SMC6-204ENST00000428868 TRPM3Q9HCF6 1732 aaPredicted RBP12.14□□□□□ -0.47
SMC6-204ENST00000428868 ANKARQ7Z5J8 1434 aa12.14□□□□□ -0.47
SMC6-204ENST00000428868 KIF1AQ12756 1690 aa12.14□□□□□ -0.47
SMC6-204ENST00000428868 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
SMC6-204ENST00000428868 PROSER2Q86WR7 435 aaPredicted RBP12.14□□□□□ -0.47
SMC6-204ENST00000428868 TMEM94Q12767 1356 aa12.14□□□□□ -0.47
SMC6-204ENST00000428868 NPC1L1Q9UHC9 1359 aa12.14□□□□□ -0.47
SMC6-204ENST00000428868 USP54Q70EL1 1684 aa12.13□□□□□ -0.47
SMC6-204ENST00000428868 CCDC61Q9Y6R9 512 aa12.12□□□□□ -0.47
SMC6-204ENST00000428868 PMFBP1Q8TBY8 1022 aa12.11□□□□□ -0.47
SMC6-204ENST00000428868 YTHDC1Q96MU7 727 aaKnown RBP12.11□□□□□ -0.47
SMC6-204ENST00000428868 LTBP4Q8N2S1 1624 aa12.11□□□□□ -0.47
SMC6-204ENST00000428868 USP6P35125 1406 aa12.11□□□□□ -0.47
SMC6-204ENST00000428868 EDC4Q6P2E9 1401 aaKnown RBP12.11□□□□□ -0.47
SMC6-204ENST00000428868 ACEP12821 1306 aa12.11□□□□□ -0.47
SMC6-204ENST00000428868 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
SMC6-204ENST00000428868 RALBP1Q15311 655 aa12.1□□□□□ -0.47
SMC6-204ENST00000428868 HDGFL2Q7Z4V5 671 aaPredicted RBP12.1□□□□□ -0.47
SMC6-204ENST00000428868 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
SMC6-204ENST00000428868 TERF2IPQ9NYB0 399 aa12.1□□□□□ -0.47
SMC6-204ENST00000428868 MST1RQ04912 1400 aa12.1□□□□□ -0.47
SMC6-204ENST00000428868 POLR3AO14802 1390 aaPredicted RBP12.09□□□□□ -0.47
SMC6-204ENST00000428868 PLEKHG3A1L390 1219 aa12.09□□□□□ -0.47
SMC6-204ENST00000428868 ZRANB1Q9UGI0 708 aa12.09□□□□□ -0.47
SMC6-204ENST00000428868 LTN1O94822 1766 aa12.09□□□□□ -0.47
SMC6-204ENST00000428868 SSH2Q76I76 1423 aa12.09□□□□□ -0.47
SMC6-204ENST00000428868 ALS2Q96Q42 1657 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms