RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 GGCXP38435 758 aa8.43□□□□□ -1.06
TIMM9P3-201ENST00000428659 SLC19A1P41440 591 aa8.43□□□□□ -1.06
TIMM9P3-201ENST00000428659 FCF1Q9Y324 198 aaKnown RBP8.43□□□□□ -1.06
TIMM9P3-201ENST00000428659 LCE2BO14633 110 aa8.42□□□□□ -1.06
TIMM9P3-201ENST00000428659 GRIPAP1Q4V328 841 aa8.42□□□□□ -1.06
TIMM9P3-201ENST00000428659 FBXO31Q5XUX0 539 aaPredicted RBP8.42□□□□□ -1.06
TIMM9P3-201ENST00000428659 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
TIMM9P3-201ENST00000428659 IRX2Q9BZI1 471 aaPredicted RBP8.42□□□□□ -1.06
TIMM9P3-201ENST00000428659 MSS51Q4VC12 460 aa8.41□□□□□ -1.06
TIMM9P3-201ENST00000428659 SPRYD7Q5W111 196 aa8.41□□□□□ -1.06
TIMM9P3-201ENST00000428659 LIMD1Q9UGP4 676 aa8.41□□□□□ -1.06
TIMM9P3-201ENST00000428659 V9GY48 417 aaPredicted RBP8.41□□□□□ -1.06
TIMM9P3-201ENST00000428659 MMP16P51512 607 aa8.4□□□□□ -1.06
TIMM9P3-201ENST00000428659 FAM117AQ9C073 453 aa8.4□□□□□ -1.06
TIMM9P3-201ENST00000428659 DXOO77932 396 aaKnown RBP8.39□□□□□ -1.07
TIMM9P3-201ENST00000428659 Q3C1V9 767 aa8.39□□□□□ -1.07
TIMM9P3-201ENST00000428659 MYSM1Q5VVJ2 828 aa8.39□□□□□ -1.07
TIMM9P3-201ENST00000428659 RSBN1LQ6PCB5 846 aaPredicted RBP8.39□□□□□ -1.07
TIMM9P3-201ENST00000428659 CABLES1Q8TDN4 633 aa8.39□□□□□ -1.07
TIMM9P3-201ENST00000428659 KDM4CQ9H3R0 1056 aa8.39□□□□□ -1.07
TIMM9P3-201ENST00000428659 GFRA3O60609 400 aa8.38□□□□□ -1.07
TIMM9P3-201ENST00000428659 PRKCSHP14314 528 aaPredicted RBP8.38□□□□□ -1.07
TIMM9P3-201ENST00000428659 TPRNQ4KMQ1 711 aa8.38□□□□□ -1.07
TIMM9P3-201ENST00000428659 PTCRAQ6ISU1 281 aaPredicted RBP8.38□□□□□ -1.07
TIMM9P3-201ENST00000428659 PLEKHG3A1L390 1219 aa8.37□□□□□ -1.07
TIMM9P3-201ENST00000428659 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
TIMM9P3-201ENST00000428659 SPTLC1O15269 473 aa8.37□□□□□ -1.07
TIMM9P3-201ENST00000428659 CSPP1Q1MSJ5 1256 aa8.37□□□□□ -1.07
TIMM9P3-201ENST00000428659 RIC3Q7Z5B4 369 aa8.37□□□□□ -1.07
TIMM9P3-201ENST00000428659 QPCTQ16769 361 aa8.36□□□□□ -1.07
TIMM9P3-201ENST00000428659 CFAP99D6REC4 459 aa8.35□□□□□ -1.07
TIMM9P3-201ENST00000428659 GDF9O60383 454 aa8.35□□□□□ -1.07
TIMM9P3-201ENST00000428659 HRCP23327 699 aa8.35□□□□□ -1.07
TIMM9P3-201ENST00000428659 ZNF598Q86UK7 904 aaKnown RBP8.35□□□□□ -1.07
TIMM9P3-201ENST00000428659 RETREG3Q86VR2 466 aa8.35□□□□□ -1.07
TIMM9P3-201ENST00000428659 POLR3EQ9NVU0 708 aa8.35□□□□□ -1.07
TIMM9P3-201ENST00000428659 PKD2L1Q9P0L9 805 aa8.35□□□□□ -1.07
TIMM9P3-201ENST00000428659 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
TIMM9P3-201ENST00000428659 PROCA1Q8NCQ7 364 aaPredicted RBP8.34□□□□□ -1.07
TIMM9P3-201ENST00000428659 PRR7Q8TB68 274 aa8.34□□□□□ -1.07
TIMM9P3-201ENST00000428659 TNFRSF10AO00220 468 aa8.33□□□□□ -1.08
TIMM9P3-201ENST00000428659 JUNDP17535 347 aa8.33□□□□□ -1.08
TIMM9P3-201ENST00000428659 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
TIMM9P3-201ENST00000428659 CCDC24Q8N4L8 307 aa8.33□□□□□ -1.08
TIMM9P3-201ENST00000428659 PDZRN3Q9UPQ7 1066 aa8.33□□□□□ -1.08
TIMM9P3-201ENST00000428659 PER1O15534 1290 aaPredicted RBP8.31□□□□□ -1.08
TIMM9P3-201ENST00000428659 SKOR1P84550 965 aa8.31□□□□□ -1.08
TIMM9P3-201ENST00000428659 MTMR2Q13614 643 aa8.31□□□□□ -1.08
TIMM9P3-201ENST00000428659 RPIAP49247 311 aa8.3□□□□□ -1.08
TIMM9P3-201ENST00000428659 BRPF1P55201 1214 aaPredicted RBP8.3□□□□□ -1.08
TIMM9P3-201ENST00000428659 FOXC1Q12948 553 aa8.3□□□□□ -1.08
TIMM9P3-201ENST00000428659 LILRB3O75022 631 aa8.29□□□□□ -1.08
TIMM9P3-201ENST00000428659 GJA5P36382 358 aa8.29□□□□□ -1.08
TIMM9P3-201ENST00000428659 NRG2O14511 850 aaPredicted RBP8.28□□□□□ -1.08
TIMM9P3-201ENST00000428659 Q6ZNB5 142 aa8.28□□□□□ -1.08
TIMM9P3-201ENST00000428659 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
TIMM9P3-201ENST00000428659 CLK2P49760 499 aaKnown RBP8.27□□□□□ -1.09
TIMM9P3-201ENST00000428659 TRIM32Q13049 653 aa8.27□□□□□ -1.09
TIMM9P3-201ENST00000428659 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
TIMM9P3-201ENST00000428659 NEUROD2Q15784 382 aa8.26□□□□□ -1.09
TIMM9P3-201ENST00000428659 IL27Q8NEV9 243 aa8.26□□□□□ -1.09
TIMM9P3-201ENST00000428659 ZBTB3Q9H5J0 574 aa8.26□□□□□ -1.09
TIMM9P3-201ENST00000428659 CD2BP2O95400 341 aaKnown RBP8.25□□□□□ -1.09
TIMM9P3-201ENST00000428659 PRR20EP86478 221 aa8.25□□□□□ -1.09
TIMM9P3-201ENST00000428659 PRR20CP86479 221 aa8.25□□□□□ -1.09
TIMM9P3-201ENST00000428659 PRR20DP86480 221 aa8.25□□□□□ -1.09
TIMM9P3-201ENST00000428659 PRR20BP86481 221 aa8.25□□□□□ -1.09
TIMM9P3-201ENST00000428659 PRR20AP86496 221 aa8.25□□□□□ -1.09
TIMM9P3-201ENST00000428659 LYPD8Q6UX82 237 aa8.25□□□□□ -1.09
TIMM9P3-201ENST00000428659 EVA1BQ9NVM1 165 aa8.25□□□□□ -1.09
TIMM9P3-201ENST00000428659 CCNYL3P0C7X3 344 aa8.24□□□□□ -1.09
TIMM9P3-201ENST00000428659 SKIV2LQ15477 1246 aaKnown RBP8.24□□□□□ -1.09
TIMM9P3-201ENST00000428659 TUSC1Q2TAM9 212 aa8.24□□□□□ -1.09
TIMM9P3-201ENST00000428659 PRPF38BQ5VTL8 546 aaKnown RBP8.24□□□□□ -1.09
TIMM9P3-201ENST00000428659 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.24□□□□□ -1.09
TIMM9P3-201ENST00000428659 MAP10Q9P2G4 905 aa8.24□□□□□ -1.09
TIMM9P3-201ENST00000428659 SPDYE5A6NIY4 337 aa8.23□□□□□ -1.09
TIMM9P3-201ENST00000428659 NUTM2BA6NNL0 878 aaPredicted RBP8.23□□□□□ -1.09
TIMM9P3-201ENST00000428659 NUTM2EB1AL46 878 aaPredicted RBP8.23□□□□□ -1.09
TIMM9P3-201ENST00000428659 ZBTB24O43167 697 aaPredicted RBP8.23□□□□□ -1.09
TIMM9P3-201ENST00000428659 CTDSPL2Q05D32 466 aa8.23□□□□□ -1.09
TIMM9P3-201ENST00000428659 PTPRNQ16849 979 aa8.23□□□□□ -1.09
TIMM9P3-201ENST00000428659 NUTM2DQ5VT03 806 aaPredicted RBP8.23□□□□□ -1.09
TIMM9P3-201ENST00000428659 NUTM2AQ8IVF1 878 aaPredicted RBP8.23□□□□□ -1.09
TIMM9P3-201ENST00000428659 TOR4AQ9NXH8 423 aa8.23□□□□□ -1.09
TIMM9P3-201ENST00000428659 F12P00748 615 aaPredicted RBP8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 SH3BP2P78314 561 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 KCNH2Q12809 1159 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 LINC01559Q495D7 138 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 SH3D19Q5HYK7 790 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 RC3H1Q5TC82 1133 aaKnown RBP8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 DESI1Q6ICB0 168 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 TRAF7Q6Q0C0 670 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 BAP1Q92560 729 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 TSC1Q92574 1164 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 MRGPRX2Q96LB1 330 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 UNC93B1Q9H1C4 597 aa8.22□□□□□ -1.09
TIMM9P3-201ENST00000428659 LAPTM4AQ15012 233 aa8.21□□□□□ -1.1
TIMM9P3-201ENST00000428659 DDRGK1Q96HY6 314 aa8.21□□□□□ -1.1
TIMM9P3-201ENST00000428659 RSPH6AQ9H0K4 717 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms