RNA–Protein interactions for RNA: ENST00000428650.5

STRC-201, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 5,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-201ENST00000428650 FAM43AQ8N2R8 423 aa17.43■□□□□ 0.38
STRC-201ENST00000428650 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
STRC-201ENST00000428650 ARHGAP5Q13017 1502 aa17.42■□□□□ 0.38
STRC-201ENST00000428650 CCDC73Q6ZRK6 1079 aa17.42■□□□□ 0.38
STRC-201ENST00000428650 NAT10Q9H0A0 1025 aaKnown RBP17.42■□□□□ 0.38
STRC-201ENST00000428650 NFKBIBQ15653 356 aa17.42■□□□□ 0.38
STRC-201ENST00000428650 RABEP1Q15276 862 aa17.41■□□□□ 0.38
STRC-201ENST00000428650 MCTP1Q6DN14 999 aa17.41■□□□□ 0.38
STRC-201ENST00000428650 BICD2Q8TD16 824 aa17.41■□□□□ 0.38
STRC-201ENST00000428650 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
STRC-201ENST00000428650 ACBD3Q9H3P7 528 aa17.41■□□□□ 0.38
STRC-201ENST00000428650 ARGLU1Q9NWB6 273 aaPredicted RBP17.41■□□□□ 0.38
STRC-201ENST00000428650 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.4■□□□□ 0.38
STRC-201ENST00000428650 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
STRC-201ENST00000428650 WDR63Q8IWG1 891 aa17.4■□□□□ 0.38
STRC-201ENST00000428650 CCDC9Q9Y3X0 531 aaKnown RBP17.4■□□□□ 0.38
STRC-201ENST00000428650 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.38
STRC-201ENST00000428650 HMGXB3Q12766 1538 aa17.39■□□□□ 0.37
STRC-201ENST00000428650 SAFBQ15424 915 aaKnown RBP eCLIP17.39■□□□□ 0.37
STRC-201ENST00000428650 CYB5RLQ6IPT4 315 aa17.39■□□□□ 0.37
STRC-201ENST00000428650 ZNF428Q96B54 188 aa17.39■□□□□ 0.37
STRC-201ENST00000428650 CNTROBQ8N137 903 aa17.39■□□□□ 0.37
STRC-201ENST00000428650 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
STRC-201ENST00000428650 CWC22Q9HCG8 908 aaKnown RBP17.39■□□□□ 0.37
STRC-201ENST00000428650 SYNJ1O43426 1573 aa17.38■□□□□ 0.37
STRC-201ENST00000428650 PDCP20941 246 aa17.38■□□□□ 0.37
STRC-201ENST00000428650 ERICH2A1L162 156 aa17.38■□□□□ 0.37
STRC-201ENST00000428650 PDIA4P13667 645 aaKnown RBP17.38■□□□□ 0.37
STRC-201ENST00000428650 ERC1Q8IUD2 1116 aa17.38■□□□□ 0.37
STRC-201ENST00000428650 ADAMTS8Q9UP79 889 aa17.38■□□□□ 0.37
STRC-201ENST00000428650 CCP110O43303 1012 aa17.37■□□□□ 0.37
STRC-201ENST00000428650 CCDC30Q5VVM6 783 aa17.37■□□□□ 0.37
STRC-201ENST00000428650 CREBRFQ8IUR6 639 aa17.37■□□□□ 0.37
STRC-201ENST00000428650 TROQ12816 1431 aaPredicted RBP17.37■□□□□ 0.37
STRC-201ENST00000428650 C9orf84Q5VXU9 1444 aa17.37■□□□□ 0.37
STRC-201ENST00000428650 UBTFL1P0CB47 393 aaPredicted RBP17.37■□□□□ 0.37
STRC-201ENST00000428650 LNPKQ9C0E8 428 aa17.36■□□□□ 0.37
STRC-201ENST00000428650 RPGRIP1LQ68CZ1 1315 aa17.36■□□□□ 0.37
STRC-201ENST00000428650 EIF2S2P20042 333 aaKnown RBP17.36■□□□□ 0.37
STRC-201ENST00000428650 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
STRC-201ENST00000428650 PES1O00541 588 aaKnown RBP17.35■□□□□ 0.37
STRC-201ENST00000428650 MAP3K1Q13233 1512 aa17.35■□□□□ 0.37
STRC-201ENST00000428650 TCP11L2Q8N4U5 519 aa17.35■□□□□ 0.37
STRC-201ENST00000428650 CDR1P51861 262 aa17.34■□□□□ 0.37
STRC-201ENST00000428650 ZNF644Q9H582 1327 aaPredicted RBP17.34■□□□□ 0.37
STRC-201ENST00000428650 NASPP49321 788 aaPredicted RBP17.34■□□□□ 0.37
STRC-201ENST00000428650 CCDC173Q0VFZ6 552 aa17.34■□□□□ 0.37
STRC-201ENST00000428650 PANK1Q8TE04 598 aa17.33■□□□□ 0.37
STRC-201ENST00000428650 CIZ1Q9ULV3 898 aaPredicted RBP17.33■□□□□ 0.37
STRC-201ENST00000428650 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.37
STRC-201ENST00000428650 VPS37CA5D8V6 355 aaPredicted RBP17.33■□□□□ 0.36
STRC-201ENST00000428650 ARID3AQ99856 593 aa17.33■□□□□ 0.36
STRC-201ENST00000428650 XBP1P17861 261 aa17.33■□□□□ 0.36
STRC-201ENST00000428650 HOMER1Q86YM7 354 aa17.33■□□□□ 0.36
STRC-201ENST00000428650 RALYLQ86SE5 291 aaKnown RBP17.32■□□□□ 0.36
STRC-201ENST00000428650 BRMS1Q9HCU9 246 aa17.32■□□□□ 0.36
STRC-201ENST00000428650 EVA1CP58658 441 aa17.32■□□□□ 0.36
STRC-201ENST00000428650 PSME1Q06323 249 aa17.32■□□□□ 0.36
STRC-201ENST00000428650 ANO8Q9HCE9 1232 aaPredicted RBP17.32■□□□□ 0.36
STRC-201ENST00000428650 MTHFSP49914 203 aa17.32■□□□□ 0.36
STRC-201ENST00000428650 HMGN5P82970 282 aaKnown RBP17.32■□□□□ 0.36
STRC-201ENST00000428650 PNISRQ8TF01 805 aaKnown RBP17.32■□□□□ 0.36
STRC-201ENST00000428650 ERBINQ96RT1 1412 aa17.31■□□□□ 0.36
STRC-201ENST00000428650 OLFM4Q6UX06 510 aa17.31■□□□□ 0.36
STRC-201ENST00000428650 CLASRPQ8N2M8 674 aaKnown RBP17.31■□□□□ 0.36
STRC-201ENST00000428650 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
STRC-201ENST00000428650 TRAK2O60296 914 aa17.31■□□□□ 0.36
STRC-201ENST00000428650 RAPGEF4Q8WZA2 1011 aa17.31■□□□□ 0.36
STRC-201ENST00000428650 CCT4P50991 539 aaKnown RBP17.3■□□□□ 0.36
STRC-201ENST00000428650 ANKRD30BQ9BXX2 1392 aa17.3■□□□□ 0.36
STRC-201ENST00000428650 DAPK1P53355 1430 aa17.3■□□□□ 0.36
STRC-201ENST00000428650 ZNF771Q7L3S4 317 aaPredicted RBP17.3■□□□□ 0.36
STRC-201ENST00000428650 AEBP1Q8IUX7 1158 aa17.3■□□□□ 0.36
STRC-201ENST00000428650 ZNF692Q9BU19 519 aaPredicted RBP17.3■□□□□ 0.36
STRC-201ENST00000428650 NFXL1Q6ZNB6 911 aa17.3■□□□□ 0.36
STRC-201ENST00000428650 CCAR2Q8N163 923 aaKnown RBP17.3■□□□□ 0.36
STRC-201ENST00000428650 DHX16O60231 1041 aaKnown RBP17.29■□□□□ 0.36
STRC-201ENST00000428650 PDZRN3Q9UPQ7 1066 aa17.29■□□□□ 0.36
STRC-201ENST00000428650 SRCIN1Q9C0H9 1055 aa17.29■□□□□ 0.36
STRC-201ENST00000428650 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
STRC-201ENST00000428650 AK7Q96M32 723 aa17.29■□□□□ 0.36
STRC-201ENST00000428650 MNS1Q8NEH6 495 aa17.29■□□□□ 0.36
STRC-201ENST00000428650 ERCC4Q92889 916 aaPredicted RBP17.29■□□□□ 0.36
STRC-201ENST00000428650 BACH2Q9BYV9 841 aa17.29■□□□□ 0.36
STRC-201ENST00000428650 APPP05067 770 aa17.29■□□□□ 0.36
STRC-201ENST00000428650 ANKRD1Q15327 319 aa17.29■□□□□ 0.36
STRC-201ENST00000428650 PIP4K2AP48426 406 aaPredicted RBP17.28■□□□□ 0.36
STRC-201ENST00000428650 VPS53Q5VIR6 699 aa17.28■□□□□ 0.36
STRC-201ENST00000428650 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
STRC-201ENST00000428650 ZNF592Q92610 1267 aa17.28■□□□□ 0.36
STRC-201ENST00000428650 TSPY26PQ9H489 355 aa17.28■□□□□ 0.36
STRC-201ENST00000428650 RIC3Q7Z5B4 369 aa17.28■□□□□ 0.36
STRC-201ENST00000428650 ZNF396Q96N95 335 aaPredicted RBP17.28■□□□□ 0.36
STRC-201ENST00000428650 PCMTD1Q96MG8 357 aaPredicted RBP17.27■□□□□ 0.36
STRC-201ENST00000428650 GGNBP2Q9H3C7 697 aa17.27■□□□□ 0.36
STRC-201ENST00000428650 GNAI2P04899 355 aa17.27■□□□□ 0.36
STRC-201ENST00000428650 CCDC141Q6ZP82 1450 aa17.27■□□□□ 0.35
STRC-201ENST00000428650 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.35
STRC-201ENST00000428650 NOM1Q5C9Z4 860 aaKnown RBP17.27■□□□□ 0.35
STRC-201ENST00000428650 TRIM34Q9BYJ4 488 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms