RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 BRWD3Q6RI45 1802 aa18.64■□□□□ 0.57
DDX39B-208ENST00000428098 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
DDX39B-208ENST00000428098 ROBO2Q9HCK4 1378 aa18.62■□□□□ 0.57
DDX39B-208ENST00000428098 FOXO3O43524 673 aa18.61■□□□□ 0.57
DDX39B-208ENST00000428098 ONECUT3O60422 494 aaPredicted RBP18.61■□□□□ 0.57
DDX39B-208ENST00000428098 SLIT2O94813 1529 aa18.6■□□□□ 0.57
DDX39B-208ENST00000428098 ESCO1Q5FWF5 840 aa18.6■□□□□ 0.57
DDX39B-208ENST00000428098 MARF1Q9Y4F3 1742 aaKnown RBP18.6■□□□□ 0.57
DDX39B-208ENST00000428098 LOC105371045A0A1W2PR82 267 aa18.59■□□□□ 0.57
DDX39B-208ENST00000428098 PXDNQ92626 1479 aa18.58■□□□□ 0.57
DDX39B-208ENST00000428098 YY1P25490 414 aa18.58■□□□□ 0.56
DDX39B-208ENST00000428098 NPHP3Q7Z494 1330 aa18.57■□□□□ 0.56
DDX39B-208ENST00000428098 FAM50AQ14320 339 aaKnown RBP18.57■□□□□ 0.56
DDX39B-208ENST00000428098 R3HDM1Q15032 1099 aaKnown RBP18.57■□□□□ 0.56
DDX39B-208ENST00000428098 KRT27Q7Z3Y8 459 aa18.57■□□□□ 0.56
DDX39B-208ENST00000428098 EN1Q05925 392 aaPredicted RBP18.56■□□□□ 0.56
DDX39B-208ENST00000428098 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.55■□□□□ 0.56
DDX39B-208ENST00000428098 BAG6P46379 1132 aa18.55■□□□□ 0.56
DDX39B-208ENST00000428098 VPS72Q15906 364 aa18.54■□□□□ 0.56
DDX39B-208ENST00000428098 SPHKAPQ2M3C7 1700 aa18.53■□□□□ 0.56
DDX39B-208ENST00000428098 NUP155O75694 1391 aa18.53■□□□□ 0.56
DDX39B-208ENST00000428098 IQGAP3Q86VI3 1631 aa18.52■□□□□ 0.56
DDX39B-208ENST00000428098 NUTM2FA1L443 756 aa18.5■□□□□ 0.55
DDX39B-208ENST00000428098 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
DDX39B-208ENST00000428098 APLP2Q06481 763 aa18.49■□□□□ 0.55
DDX39B-208ENST00000428098 FAM182BQ5T319 152 aa18.49■□□□□ 0.55
DDX39B-208ENST00000428098 CABLES1Q8TDN4 633 aa18.49■□□□□ 0.55
DDX39B-208ENST00000428098 CCDC9Q9Y3X0 531 aaKnown RBP18.49■□□□□ 0.55
DDX39B-208ENST00000428098 NEXMIFQ5QGS0 1516 aa18.49■□□□□ 0.55
DDX39B-208ENST00000428098 EZH2Q15910 746 aaKnown RBP18.45■□□□□ 0.54
DDX39B-208ENST00000428098 HFM1A2PYH4 1435 aa18.45■□□□□ 0.54
DDX39B-208ENST00000428098 PRAG1Q86YV5 1406 aa18.44■□□□□ 0.54
DDX39B-208ENST00000428098 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
DDX39B-208ENST00000428098 PLEKHG5O94827 1062 aa18.44■□□□□ 0.54
DDX39B-208ENST00000428098 FAM98CQ17RN3 349 aaKnown RBP18.44■□□□□ 0.54
DDX39B-208ENST00000428098 LRPPRCP42704 1394 aaKnown RBP18.43■□□□□ 0.54
DDX39B-208ENST00000428098 KRT28Q7Z3Y7 464 aa18.43■□□□□ 0.54
DDX39B-208ENST00000428098 USP32Q8NFA0 1604 aa18.42■□□□□ 0.54
DDX39B-208ENST00000428098 VGFO15240 615 aaPredicted RBP18.42■□□□□ 0.54
DDX39B-208ENST00000428098 A0A0G2JS52 829 aa18.41■□□□□ 0.54
DDX39B-208ENST00000428098 MYT1Q01538 1121 aa18.41■□□□□ 0.54
DDX39B-208ENST00000428098 WAPLQ7Z5K2 1190 aa18.41■□□□□ 0.54
DDX39B-208ENST00000428098 CAMKK2Q96RR4 588 aa18.41■□□□□ 0.54
DDX39B-208ENST00000428098 NAIPQ13075 1403 aa18.4■□□□□ 0.54
DDX39B-208ENST00000428098 CDC42BPGQ6DT37 1551 aa18.39■□□□□ 0.53
DDX39B-208ENST00000428098 HAP1P54257 671 aaPredicted RBP18.39■□□□□ 0.53
DDX39B-208ENST00000428098 ROCK1Q13464 1354 aa18.39■□□□□ 0.53
DDX39B-208ENST00000428098 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
DDX39B-208ENST00000428098 DISP2A7MBM2 1401 aa18.36■□□□□ 0.53
DDX39B-208ENST00000428098 PLCH1Q4KWH8 1693 aa18.35■□□□□ 0.53
DDX39B-208ENST00000428098 STK26Q9P289 416 aa18.35■□□□□ 0.53
DDX39B-208ENST00000428098 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
DDX39B-208ENST00000428098 IFFO2Q5TF58 517 aa18.34■□□□□ 0.53
DDX39B-208ENST00000428098 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
DDX39B-208ENST00000428098 PLEKHH1Q9ULM0 1364 aa18.33■□□□□ 0.53
DDX39B-208ENST00000428098 RGPD1P0DJD0 1748 aa18.33■□□□□ 0.52
DDX39B-208ENST00000428098 TRIM37O94972 964 aa18.33■□□□□ 0.52
DDX39B-208ENST00000428098 BTG4Q9NY30 223 aa18.33■□□□□ 0.52
DDX39B-208ENST00000428098 LMOD2Q6P5Q4 547 aa18.32■□□□□ 0.52
DDX39B-208ENST00000428098 TNS3Q68CZ2 1445 aa18.32■□□□□ 0.52
DDX39B-208ENST00000428098 TNS1Q9HBL0 1735 aaKnown RBP18.3■□□□□ 0.52
DDX39B-208ENST00000428098 ITGAEP38570 1179 aa18.3■□□□□ 0.52
DDX39B-208ENST00000428098 PSME1Q06323 249 aa18.3■□□□□ 0.52
DDX39B-208ENST00000428098 PHF8Q9UPP1 1060 aa18.3■□□□□ 0.52
DDX39B-208ENST00000428098 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
DDX39B-208ENST00000428098 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
DDX39B-208ENST00000428098 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
DDX39B-208ENST00000428098 APBA3O96018 575 aa18.29■□□□□ 0.52
DDX39B-208ENST00000428098 KIF1BO60333 1816 aa18.28■□□□□ 0.52
DDX39B-208ENST00000428098 ZNF784Q8NCA9 323 aaPredicted RBP18.28■□□□□ 0.52
DDX39B-208ENST00000428098 TMEM132EQ6IEE7 984 aa18.27■□□□□ 0.52
DDX39B-208ENST00000428098 SBNO1A3KN83 1393 aa18.27■□□□□ 0.51
DDX39B-208ENST00000428098 NRAPQ86VF7 1730 aa18.26■□□□□ 0.51
DDX39B-208ENST00000428098 ADGRF5Q8IZF2 1346 aa18.26■□□□□ 0.51
DDX39B-208ENST00000428098 SPON1Q9HCB6 807 aa18.26■□□□□ 0.51
DDX39B-208ENST00000428098 PPP1R1BQ9UD71 204 aaPredicted RBP18.26■□□□□ 0.51
DDX39B-208ENST00000428098 SENP3-EIF4A1A0A087X0R7 540 aa18.25■□□□□ 0.51
DDX39B-208ENST00000428098 DCAF8L1A6NGE4 600 aa18.25■□□□□ 0.51
DDX39B-208ENST00000428098 KCNQ2O43526 872 aa18.25■□□□□ 0.51
DDX39B-208ENST00000428098 TECPR2O15040 1411 aa18.24■□□□□ 0.51
DDX39B-208ENST00000428098 ABCA3Q99758 1704 aa18.24■□□□□ 0.51
DDX39B-208ENST00000428098 FMN2Q9NZ56 1722 aa18.24■□□□□ 0.51
DDX39B-208ENST00000428098 FAM196AQ6ZSG2 479 aa18.24■□□□□ 0.51
DDX39B-208ENST00000428098 ABCC11Q96J66 1382 aa18.24■□□□□ 0.51
DDX39B-208ENST00000428098 KIF1AQ12756 1690 aa18.24■□□□□ 0.51
DDX39B-208ENST00000428098 RGPD8O14715 1765 aaPredicted RBP18.23■□□□□ 0.51
DDX39B-208ENST00000428098 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
DDX39B-208ENST00000428098 ARHGEF10O15013 1369 aa18.22■□□□□ 0.51
DDX39B-208ENST00000428098 PARD3Q8TEW0 1356 aa18.22■□□□□ 0.51
DDX39B-208ENST00000428098 NBPF8Q3BBV2 869 aa18.22■□□□□ 0.51
DDX39B-208ENST00000428098 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
DDX39B-208ENST00000428098 CAMTA1Q9Y6Y1 1673 aa18.22■□□□□ 0.51
DDX39B-208ENST00000428098 NINLQ9Y2I6 1382 aa18.21■□□□□ 0.51
DDX39B-208ENST00000428098 PPLO60437 1756 aa18.2■□□□□ 0.5
DDX39B-208ENST00000428098 PMFBP1Q8TBY8 1022 aa18.2■□□□□ 0.5
DDX39B-208ENST00000428098 C1QTNF8P60827 252 aa18.19■□□□□ 0.5
DDX39B-208ENST00000428098 UTRNP46939 3433 aa18.19■□□□□ 0.5
DDX39B-208ENST00000428098 NRXN1Q9ULB1 1477 aa18.19■□□□□ 0.5
DDX39B-208ENST00000428098 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
DDX39B-208ENST00000428098 NUP188Q5SRE5 1749 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms