RNA–Protein interactions for RNA: ENST00000428082.6

TVP23C-203, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-203ENST00000428082 AMOTL2Q9Y2J4 779 aa21.35■■□□□ 1.01
TVP23C-203ENST00000428082 SAFB2Q14151 953 aaKnown RBP eCLIP21.34■■□□□ 1.01
TVP23C-203ENST00000428082 XRN1Q8IZH2 1706 aaKnown RBP21.33■■□□□ 1.01
TVP23C-203ENST00000428082 WAPLQ7Z5K2 1190 aa21.33■■□□□ 1
TVP23C-203ENST00000428082 ROBO2Q9HCK4 1378 aa21.32■■□□□ 1
TVP23C-203ENST00000428082 PLEKHH1Q9ULM0 1364 aa21.32■■□□□ 1
TVP23C-203ENST00000428082 TSHZ2Q9NRE2 1034 aa21.32■■□□□ 1
TVP23C-203ENST00000428082 POGKQ9P215 609 aa21.32■■□□□ 1
TVP23C-203ENST00000428082 DISP3Q9P2K9 1392 aa21.32■■□□□ 1
TVP23C-203ENST00000428082 ERICH6BQ5W0A0 696 aa21.31■■□□□ 1
TVP23C-203ENST00000428082 SBNO2Q9Y2G9 1366 aa21.31■■□□□ 1
TVP23C-203ENST00000428082 MRS2Q9HD23 443 aa21.3■■□□□ 1
TVP23C-203ENST00000428082 FAM135BQ49AJ0 1406 aa21.3■■□□□ 1
TVP23C-203ENST00000428082 KCNA6P17658 529 aa21.29■■□□□ 1
TVP23C-203ENST00000428082 TMF1P82094 1093 aa21.29■■□□□ 1
TVP23C-203ENST00000428082 SIRT1Q96EB6 747 aa21.29■■□□□ 1
TVP23C-203ENST00000428082 PTCH1Q13635 1447 aa21.28■■□□□ 1
TVP23C-203ENST00000428082 MINK1Q8N4C8 1332 aaPredicted RBP21.27■■□□□ 1
TVP23C-203ENST00000428082 POLR3GLQ9BT43 218 aa21.26■□□□□ 0.99
TVP23C-203ENST00000428082 ZBED9Q6R2W3 1325 aa21.26■□□□□ 0.99
TVP23C-203ENST00000428082 NWD1Q149M9 1564 aa21.25■□□□□ 0.99
TVP23C-203ENST00000428082 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
TVP23C-203ENST00000428082 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.24■□□□□ 0.99
TVP23C-203ENST00000428082 SLC24A1O60721 1099 aa21.23■□□□□ 0.99
TVP23C-203ENST00000428082 STRCP1A6NGW2 1772 aa21.23■□□□□ 0.99
TVP23C-203ENST00000428082 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
TVP23C-203ENST00000428082 EVC2Q86UK5 1308 aa21.2■□□□□ 0.99
TVP23C-203ENST00000428082 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
TVP23C-203ENST00000428082 FAM9BQ8IZU0 186 aa21.2■□□□□ 0.98
TVP23C-203ENST00000428082 KTN1Q86UP2 1357 aaKnown RBP21.19■□□□□ 0.98
TVP23C-203ENST00000428082 CDCA8Q53HL2 280 aa21.19■□□□□ 0.98
TVP23C-203ENST00000428082 RBM33Q96EV2 1170 aaKnown RBP21.18■□□□□ 0.98
TVP23C-203ENST00000428082 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
TVP23C-203ENST00000428082 NKTRP30414 1462 aaKnown RBP21.17■□□□□ 0.98
TVP23C-203ENST00000428082 ADGRB2O60241 1585 aa21.16■□□□□ 0.98
TVP23C-203ENST00000428082 CDK19Q9BWU1 502 aa21.16■□□□□ 0.98
TVP23C-203ENST00000428082 CABP2Q9NPB3 220 aa21.16■□□□□ 0.98
TVP23C-203ENST00000428082 MYOM1P52179 1685 aa21.15■□□□□ 0.98
TVP23C-203ENST00000428082 NALCNQ8IZF0 1738 aa21.15■□□□□ 0.98
TVP23C-203ENST00000428082 SRPK2P78362 688 aaKnown RBP21.15■□□□□ 0.98
TVP23C-203ENST00000428082 ZNF335Q9H4Z2 1342 aaPredicted RBP21.15■□□□□ 0.98
TVP23C-203ENST00000428082 WASLO00401 505 aaPredicted RBP21.14■□□□□ 0.98
TVP23C-203ENST00000428082 PROSER2Q86WR7 435 aaPredicted RBP21.14■□□□□ 0.98
TVP23C-203ENST00000428082 PUS7Q96PZ0 661 aaKnown RBP21.12■□□□□ 0.97
TVP23C-203ENST00000428082 ADGRL3Q9HAR2 1447 aa21.09■□□□□ 0.97
TVP23C-203ENST00000428082 RALBP1Q15311 655 aa21.09■□□□□ 0.97
TVP23C-203ENST00000428082 TMEM94Q12767 1356 aa21.08■□□□□ 0.97
TVP23C-203ENST00000428082 PPP4R2Q9NY27 417 aa21.08■□□□□ 0.96
TVP23C-203ENST00000428082 ATAD2Q6PL18 1390 aa21.07■□□□□ 0.96
TVP23C-203ENST00000428082 C14orf37Q86TY3 774 aa21.07■□□□□ 0.96
TVP23C-203ENST00000428082 TMC1Q8TDI8 760 aa21.07■□□□□ 0.96
TVP23C-203ENST00000428082 XIRP1Q702N8 1843 aaKnown RBP21.07■□□□□ 0.96
TVP23C-203ENST00000428082 SLC12A5Q9H2X9 1139 aa21.06■□□□□ 0.96
TVP23C-203ENST00000428082 CDC42BPGQ6DT37 1551 aa21.06■□□□□ 0.96
TVP23C-203ENST00000428082 NUTM2FA1L443 756 aa21.06■□□□□ 0.96
TVP23C-203ENST00000428082 SMG6Q86US8 1419 aaKnown RBP21.06■□□□□ 0.96
TVP23C-203ENST00000428082 LRRC7Q96NW7 1537 aa21.05■□□□□ 0.96
TVP23C-203ENST00000428082 PRR36Q9H6K5 1346 aa21.05■□□□□ 0.96
TVP23C-203ENST00000428082 FMN2Q9NZ56 1722 aa21.05■□□□□ 0.96
TVP23C-203ENST00000428082 NUDT16Q96DE0 195 aaKnown RBP21.05■□□□□ 0.96
TVP23C-203ENST00000428082 PANK3Q9H999 370 aa21.05■□□□□ 0.96
TVP23C-203ENST00000428082 ATP7BP35670 1465 aa21.05■□□□□ 0.96
TVP23C-203ENST00000428082 USP32Q8NFA0 1604 aa21.04■□□□□ 0.96
TVP23C-203ENST00000428082 BRD4O60885 1362 aaPredicted RBP21.04■□□□□ 0.96
TVP23C-203ENST00000428082 RGPD8O14715 1765 aaPredicted RBP21.03■□□□□ 0.96
TVP23C-203ENST00000428082 NCOA3Q9Y6Q9 1424 aa21.03■□□□□ 0.96
TVP23C-203ENST00000428082 MYBBP1AQ9BQG0 1328 aaKnown RBP21.03■□□□□ 0.96
TVP23C-203ENST00000428082 CABP1Q9NZU7 370 aa21.02■□□□□ 0.95
TVP23C-203ENST00000428082 C19orf44Q9H6X5 657 aa21.01■□□□□ 0.95
TVP23C-203ENST00000428082 TOPAZ1Q8N9V7 1692 aa21.01■□□□□ 0.95
TVP23C-203ENST00000428082 NINLQ9Y2I6 1382 aa21■□□□□ 0.95
TVP23C-203ENST00000428082 PNISRQ8TF01 805 aaKnown RBP21■□□□□ 0.95
TVP23C-203ENST00000428082 CCDC61Q9Y6R9 512 aa21■□□□□ 0.95
TVP23C-203ENST00000428082 PPIP5K1Q6PFW1 1433 aa21■□□□□ 0.95
TVP23C-203ENST00000428082 PER1O15534 1290 aaPredicted RBP20.99■□□□□ 0.95
TVP23C-203ENST00000428082 CD163L1Q9NR16 1453 aa20.98■□□□□ 0.95
TVP23C-203ENST00000428082 NUDCQ9Y266 331 aa20.98■□□□□ 0.95
TVP23C-203ENST00000428082 LTBP4Q8N2S1 1624 aa20.98■□□□□ 0.95
TVP23C-203ENST00000428082 ANKARQ7Z5J8 1434 aa20.98■□□□□ 0.95
TVP23C-203ENST00000428082 ITSN1Q15811 1721 aa20.98■□□□□ 0.95
TVP23C-203ENST00000428082 RBM19Q9Y4C8 960 aaKnown RBP20.98■□□□□ 0.95
TVP23C-203ENST00000428082 CARD14Q9BXL6 1004 aa20.97■□□□□ 0.95
TVP23C-203ENST00000428082 ANKRD36BQ8N2N9 1353 aa20.97■□□□□ 0.95
TVP23C-203ENST00000428082 A0A1W2PP64 1363 aa20.96■□□□□ 0.95
TVP23C-203ENST00000428082 IRX6P78412 446 aaPredicted RBP20.96■□□□□ 0.95
TVP23C-203ENST00000428082 MSH6P52701 1360 aa20.96■□□□□ 0.95
TVP23C-203ENST00000428082 DCCP43146 1447 aa20.95■□□□□ 0.94
TVP23C-203ENST00000428082 ATF3P18847 181 aa20.94■□□□□ 0.94
TVP23C-203ENST00000428082 TERF2IPQ9NYB0 399 aa20.94■□□□□ 0.94
TVP23C-203ENST00000428082 PLEKHG3A1L390 1219 aa20.92■□□□□ 0.94
TVP23C-203ENST00000428082 CNGB1Q14028 1251 aaPredicted RBP20.92■□□□□ 0.94
TVP23C-203ENST00000428082 KNSTRNQ9Y448 316 aa20.92■□□□□ 0.94
TVP23C-203ENST00000428082 NSD3Q9BZ95 1437 aa20.92■□□□□ 0.94
TVP23C-203ENST00000428082 AKAP12Q02952 1782 aa20.92■□□□□ 0.94
TVP23C-203ENST00000428082 PARD3Q8TEW0 1356 aa20.92■□□□□ 0.94
TVP23C-203ENST00000428082 HDGFL2Q7Z4V5 671 aaPredicted RBP20.92■□□□□ 0.94
TVP23C-203ENST00000428082 NLRP13Q86W25 1043 aa20.92■□□□□ 0.94
TVP23C-203ENST00000428082 PMFBP1Q8TBY8 1022 aa20.92■□□□□ 0.94
TVP23C-203ENST00000428082 CPSF1Q10570 1443 aaKnown RBP20.91■□□□□ 0.94
TVP23C-203ENST00000428082 MST1RQ04912 1400 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms