RNA–Protein interactions for RNA: ENST00000428078.4

LINC01664-201, Transcript of long intergenic non-protein coding RNA 1664, human

TSL 5

Gene LINC01664, Length 823 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01664-201	ENST00000428078	BCL9L	Q86UU0	1499 aa		19.72	■□□□□ 0.75
LINC01664-201	ENST00000428078	NPHP3	Q7Z494	1330 aa		19.72	■□□□□ 0.75
LINC01664-201	ENST00000428078	KIF1B	O60333	1816 aa		19.71	■□□□□ 0.75
LINC01664-201	ENST00000428078	HFM1	A2PYH4	1435 aa		19.7	■□□□□ 0.74
LINC01664-201	ENST00000428078	PXDN	Q92626	1479 aa		19.69	■□□□□ 0.74
LINC01664-201	ENST00000428078	VGF	O15240	615 aa	Predicted RBP	19.69	■□□□□ 0.74
LINC01664-201	ENST00000428078	CCDC125	Q86Z20	511 aa		19.69	■□□□□ 0.74
LINC01664-201	ENST00000428078	PPARGC1B	Q86YN6	1023 aa	Known RBP	19.68	■□□□□ 0.74
LINC01664-201	ENST00000428078	GJD4	Q96KN9	370 aa	Predicted RBP	19.68	■□□□□ 0.74
LINC01664-201	ENST00000428078	NUTM2F	A1L443	756 aa		19.67	■□□□□ 0.74
LINC01664-201	ENST00000428078	FOXO3	O43524	673 aa		19.67	■□□□□ 0.74
LINC01664-201	ENST00000428078	PRAG1	Q86YV5	1406 aa		19.67	■□□□□ 0.74
LINC01664-201	ENST00000428078	CDC42BPG	Q6DT37	1551 aa		19.66	■□□□□ 0.74
LINC01664-201	ENST00000428078	MARF1	Q9Y4F3	1742 aa	Known RBP	19.65	■□□□□ 0.74
LINC01664-201	ENST00000428078	BLM	P54132	1417 aa	Predicted RBP	19.64	■□□□□ 0.73
LINC01664-201	ENST00000428078	RALGAPB	Q86X10	1494 aa		19.64	■□□□□ 0.73
LINC01664-201	ENST00000428078	DEFB132	Q7Z7B7	95 aa		19.63	■□□□□ 0.73
LINC01664-201	ENST00000428078	GLI3	P10071	1580 aa		19.62	■□□□□ 0.73
LINC01664-201	ENST00000428078	NAIP	Q13075	1403 aa		19.62	■□□□□ 0.73
LINC01664-201	ENST00000428078	LRPPRC	P42704	1394 aa	Known RBP	19.61	■□□□□ 0.73
LINC01664-201	ENST00000428078	UNC5CL	Q8IV45	518 aa		19.61	■□□□□ 0.73
LINC01664-201	ENST00000428078	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	19.6	■□□□□ 0.73
LINC01664-201	ENST00000428078	PLEKHG5	O94827	1062 aa		19.6	■□□□□ 0.73
LINC01664-201	ENST00000428078	STK26	Q9P289	416 aa		19.6	■□□□□ 0.73
LINC01664-201	ENST00000428078	RPGRIP1L	Q68CZ1	1315 aa		19.59	■□□□□ 0.73
LINC01664-201	ENST00000428078	SF3B2	Q13435	895 aa	Known RBP	19.59	■□□□□ 0.73
LINC01664-201	ENST00000428078	SLIT2	O94813	1529 aa		19.59	■□□□□ 0.73
LINC01664-201	ENST00000428078	PPL	O60437	1756 aa		19.58	■□□□□ 0.73
LINC01664-201	ENST00000428078	WAPL	Q7Z5K2	1190 aa		19.58	■□□□□ 0.72
LINC01664-201	ENST00000428078	HAP1	P54257	671 aa	Predicted RBP	19.57	■□□□□ 0.72
LINC01664-201	ENST00000428078	USP32	Q8NFA0	1604 aa		19.57	■□□□□ 0.72
LINC01664-201	ENST00000428078	CCDC9	Q9Y3X0	531 aa	Known RBP	19.56	■□□□□ 0.72
LINC01664-201	ENST00000428078	SPATA31A3	Q5VYP0	1347 aa		19.55	■□□□□ 0.72
LINC01664-201	ENST00000428078	SEPT12	Q8IYM1	358 aa		19.55	■□□□□ 0.72
LINC01664-201	ENST00000428078	PLEKHH1	Q9ULM0	1364 aa		19.55	■□□□□ 0.72
LINC01664-201	ENST00000428078	CCDC144A	A2RUR9	1427 aa		19.54	■□□□□ 0.72
LINC01664-201	ENST00000428078	BRWD3	Q6RI45	1802 aa		19.54	■□□□□ 0.72
LINC01664-201	ENST00000428078	SLC4A1AP	Q9BWU0	796 aa	Known RBP	19.54	■□□□□ 0.72
LINC01664-201	ENST00000428078	ADGRF5	Q8IZF2	1346 aa		19.53	■□□□□ 0.72
LINC01664-201	ENST00000428078	RRBP1	Q9P2E9	1410 aa	Known RBP	19.52	■□□□□ 0.72
LINC01664-201	ENST00000428078		A0A0G2JS52	829 aa		19.52	■□□□□ 0.72
LINC01664-201	ENST00000428078	PSD	A5PKW4	1024 aa	Predicted RBP	19.52	■□□□□ 0.72
LINC01664-201	ENST00000428078	MYT1	Q01538	1121 aa		19.52	■□□□□ 0.72
LINC01664-201	ENST00000428078	TECPR2	O15040	1411 aa		19.51	■□□□□ 0.71
LINC01664-201	ENST00000428078	KRT28	Q7Z3Y7	464 aa		19.51	■□□□□ 0.71
LINC01664-201	ENST00000428078	CABLES1	Q8TDN4	633 aa		19.51	■□□□□ 0.71
LINC01664-201	ENST00000428078	KIF1A	Q12756	1690 aa		19.51	■□□□□ 0.71
LINC01664-201	ENST00000428078	FMN2	Q9NZ56	1722 aa		19.51	■□□□□ 0.71
LINC01664-201	ENST00000428078	LRP5	O75197	1615 aa		19.51	■□□□□ 0.71
LINC01664-201	ENST00000428078	TMEM132E	Q6IEE7	984 aa		19.5	■□□□□ 0.71
LINC01664-201	ENST00000428078	TNS3	Q68CZ2	1445 aa		19.5	■□□□□ 0.71
LINC01664-201	ENST00000428078	VPS72	Q15906	364 aa		19.49	■□□□□ 0.71
LINC01664-201	ENST00000428078	RGL3	Q3MIN7	710 aa		19.49	■□□□□ 0.71
LINC01664-201	ENST00000428078	LMOD2	Q6P5Q4	547 aa		19.49	■□□□□ 0.71
LINC01664-201	ENST00000428078	KRT27	Q7Z3Y8	459 aa		19.49	■□□□□ 0.71
LINC01664-201	ENST00000428078	PLCH1	Q4KWH8	1693 aa		19.49	■□□□□ 0.71
LINC01664-201	ENST00000428078	KNDC1	Q76NI1	1749 aa		19.46	■□□□□ 0.71
LINC01664-201	ENST00000428078	ABCC11	Q96J66	1382 aa		19.45	■□□□□ 0.7
LINC01664-201	ENST00000428078	BAG6	P46379	1132 aa		19.45	■□□□□ 0.7
LINC01664-201	ENST00000428078	PHF8	Q9UPP1	1060 aa		19.45	■□□□□ 0.7
LINC01664-201	ENST00000428078	YTHDC2	Q9H6S0	1430 aa	Known RBP	19.43	■□□□□ 0.7
LINC01664-201	ENST00000428078	NWD2	Q9ULI1	1742 aa		19.43	■□□□□ 0.7
LINC01664-201	ENST00000428078	HRC	P23327	699 aa		19.43	■□□□□ 0.7
LINC01664-201	ENST00000428078	PSME1	Q06323	249 aa		19.43	■□□□□ 0.7
LINC01664-201	ENST00000428078	PIK3C2G	O75747	1445 aa		19.42	■□□□□ 0.7
LINC01664-201	ENST00000428078	ABCA3	Q99758	1704 aa		19.42	■□□□□ 0.7
LINC01664-201	ENST00000428078	FAM98C	Q17RN3	349 aa	Known RBP	19.42	■□□□□ 0.7
LINC01664-201	ENST00000428078	ANKRD30B	Q9BXX2	1392 aa		19.42	■□□□□ 0.7
LINC01664-201	ENST00000428078	IFT172	Q9UG01	1749 aa		19.42	■□□□□ 0.7
LINC01664-201	ENST00000428078	SPATA31E1	Q6ZUB1	1445 aa		19.41	■□□□□ 0.7
LINC01664-201	ENST00000428078	ONECUT3	O60422	494 aa	Predicted RBP	19.4	■□□□□ 0.7
LINC01664-201	ENST00000428078	SAFB2	Q14151	953 aa	Known RBP eCLIP	19.4	■□□□□ 0.7
LINC01664-201	ENST00000428078	ARHGEF10	O15013	1369 aa		19.4	■□□□□ 0.7
LINC01664-201	ENST00000428078	NRXN1	Q9ULB1	1477 aa		19.4	■□□□□ 0.7
LINC01664-201	ENST00000428078	RGPD8	O14715	1765 aa	Predicted RBP	19.39	■□□□□ 0.7
LINC01664-201	ENST00000428078	EN1	Q05925	392 aa	Predicted RBP	19.39	■□□□□ 0.69
LINC01664-201	ENST00000428078	SBNO1	A3KN83	1393 aa		19.39	■□□□□ 0.69
LINC01664-201	ENST00000428078	FAM83G	A6ND36	823 aa		19.38	■□□□□ 0.69
LINC01664-201	ENST00000428078	FAM182B	Q5T319	152 aa		19.38	■□□□□ 0.69
LINC01664-201	ENST00000428078	R3HDM1	Q15032	1099 aa	Known RBP	19.37	■□□□□ 0.69
LINC01664-201	ENST00000428078	PMFBP1	Q8TBY8	1022 aa		19.37	■□□□□ 0.69
LINC01664-201	ENST00000428078	BTG4	Q9NY30	223 aa		19.37	■□□□□ 0.69
LINC01664-201	ENST00000428078	NRAP	Q86VF7	1730 aa		19.37	■□□□□ 0.69
LINC01664-201	ENST00000428078	PRAM1	Q96QH2	718 aa		19.34	■□□□□ 0.69
LINC01664-201	ENST00000428078	RGPD1	P0DJD0	1748 aa		19.33	■□□□□ 0.68
LINC01664-201	ENST00000428078	CFAP70	Q5T0N1	1121 aa		19.31	■□□□□ 0.68
LINC01664-201	ENST00000428078	DHX57	Q6P158	1386 aa	Known RBP	19.31	■□□□□ 0.68
LINC01664-201	ENST00000428078	SIRT1	Q96EB6	747 aa		19.3	■□□□□ 0.68
LINC01664-201	ENST00000428078	POGK	Q9P215	609 aa		19.3	■□□□□ 0.68
LINC01664-201	ENST00000428078	COL14A1	Q05707	1796 aa	Known RBP	19.29	■□□□□ 0.68
LINC01664-201	ENST00000428078	EZH2	Q15910	746 aa	Known RBP	19.29	■□□□□ 0.68
LINC01664-201	ENST00000428078	C14orf93	Q9H972	538 aa	Known RBP	19.29	■□□□□ 0.68
LINC01664-201	ENST00000428078	ANKAR	Q7Z5J8	1434 aa		19.28	■□□□□ 0.68
LINC01664-201	ENST00000428078	MPHOSPH9	Q99550	1183 aa		19.28	■□□□□ 0.68
LINC01664-201	ENST00000428078	HIRIP3	Q9BW71	556 aa	Predicted RBP	19.28	■□□□□ 0.68
LINC01664-201	ENST00000428078	TNS1	Q9HBL0	1735 aa	Known RBP	19.28	■□□□□ 0.68
LINC01664-201	ENST00000428078	TRPM3	Q9HCF6	1732 aa	Predicted RBP	19.28	■□□□□ 0.68
LINC01664-201	ENST00000428078	SPATA31A5	Q5VU36	1347 aa		19.27	■□□□□ 0.68
LINC01664-201	ENST00000428078	SPATA31A7	Q8IWB4	1347 aa		19.27	■□□□□ 0.68
LINC01664-201	ENST00000428078	GPRASP1	Q5JY77	1395 aa		19.27	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms