RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SPDYE1Q8NFV5 336 aaPredicted RBP13.54□□□□□ -0.24
RFX3-AS1-202ENST00000427722 C19orf44Q9H6X5 657 aa13.54□□□□□ -0.24
RFX3-AS1-202ENST00000427722 SLAIN2Q9P270 581 aa13.54□□□□□ -0.24
RFX3-AS1-202ENST00000427722 PTCH1Q13635 1447 aa13.54□□□□□ -0.24
RFX3-AS1-202ENST00000427722 ROBO2Q9HCK4 1378 aa13.53□□□□□ -0.24
RFX3-AS1-202ENST00000427722 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
RFX3-AS1-202ENST00000427722 ADGRL3Q9HAR2 1447 aa13.53□□□□□ -0.24
RFX3-AS1-202ENST00000427722 PPLO60437 1756 aa13.53□□□□□ -0.24
RFX3-AS1-202ENST00000427722 DCCP43146 1447 aa13.52□□□□□ -0.25
RFX3-AS1-202ENST00000427722 ROBO1Q9Y6N7 1651 aa13.51□□□□□ -0.25
RFX3-AS1-202ENST00000427722 PRAG1Q86YV5 1406 aa13.51□□□□□ -0.25
RFX3-AS1-202ENST00000427722 PIP4P2Q8N4L2 257 aa13.51□□□□□ -0.25
RFX3-AS1-202ENST00000427722 MYOM2P54296 1465 aa13.5□□□□□ -0.25
RFX3-AS1-202ENST00000427722 CLEC11AQ9Y240 323 aa13.5□□□□□ -0.25
RFX3-AS1-202ENST00000427722 SETD1AO15047 1707 aaKnown RBP13.5□□□□□ -0.25
RFX3-AS1-202ENST00000427722 MED1Q15648 1581 aaPredicted RBP13.49□□□□□ -0.25
RFX3-AS1-202ENST00000427722 ASXL1Q8IXJ9 1541 aa13.49□□□□□ -0.25
RFX3-AS1-202ENST00000427722 STK26Q9P289 416 aa13.49□□□□□ -0.25
RFX3-AS1-202ENST00000427722 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.48□□□□□ -0.25
RFX3-AS1-202ENST00000427722 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
RFX3-AS1-202ENST00000427722 TMEM132EQ6IEE7 984 aa13.48□□□□□ -0.25
RFX3-AS1-202ENST00000427722 NRXN1Q9ULB1 1477 aa13.48□□□□□ -0.25
RFX3-AS1-202ENST00000427722 MST1RQ04912 1400 aa13.47□□□□□ -0.25
RFX3-AS1-202ENST00000427722 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
RFX3-AS1-202ENST00000427722 LRPPRCP42704 1394 aaKnown RBP13.47□□□□□ -0.25
RFX3-AS1-202ENST00000427722 CFAP70Q5T0N1 1121 aa13.46□□□□□ -0.25
RFX3-AS1-202ENST00000427722 BRINP3Q76B58 766 aa13.46□□□□□ -0.25
RFX3-AS1-202ENST00000427722 TECPR2O15040 1411 aa13.46□□□□□ -0.26
RFX3-AS1-202ENST00000427722 C14orf93Q9H972 538 aaKnown RBP13.45□□□□□ -0.26
RFX3-AS1-202ENST00000427722 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
RFX3-AS1-202ENST00000427722 YTHDC2Q9H6S0 1430 aaKnown RBP13.45□□□□□ -0.26
RFX3-AS1-202ENST00000427722 NALCNQ8IZF0 1738 aa13.44□□□□□ -0.26
RFX3-AS1-202ENST00000427722 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
RFX3-AS1-202ENST00000427722 DCAF11Q8TEB1 546 aa13.44□□□□□ -0.26
RFX3-AS1-202ENST00000427722 ABCC11Q96J66 1382 aa13.44□□□□□ -0.26
RFX3-AS1-202ENST00000427722 PLEKHH1Q9ULM0 1364 aa13.44□□□□□ -0.26
RFX3-AS1-202ENST00000427722 ILDR2Q71H61 639 aa13.43□□□□□ -0.26
RFX3-AS1-202ENST00000427722 WAPLQ7Z5K2 1190 aa13.43□□□□□ -0.26
RFX3-AS1-202ENST00000427722 DHX57Q6P158 1386 aaKnown RBP13.43□□□□□ -0.26
RFX3-AS1-202ENST00000427722 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
RFX3-AS1-202ENST00000427722 C1orf167Q5SNV9 1468 aa13.42□□□□□ -0.26
RFX3-AS1-202ENST00000427722 JCADQ9P266 1359 aa13.42□□□□□ -0.26
RFX3-AS1-202ENST00000427722 COL16A1Q07092 1604 aaPredicted RBP13.42□□□□□ -0.26
RFX3-AS1-202ENST00000427722 LAMC1P11047 1609 aa13.4□□□□□ -0.26
RFX3-AS1-202ENST00000427722 PHLPP1O60346 1717 aa13.4□□□□□ -0.26
RFX3-AS1-202ENST00000427722 CDC42BPGQ6DT37 1551 aa13.4□□□□□ -0.26
RFX3-AS1-202ENST00000427722 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
RFX3-AS1-202ENST00000427722 ADGRB1O14514 1584 aa13.38□□□□□ -0.27
RFX3-AS1-202ENST00000427722 SAFB2Q14151 953 aaKnown RBP eCLIP13.38□□□□□ -0.27
RFX3-AS1-202ENST00000427722 PRAM1Q96QH2 718 aa13.38□□□□□ -0.27
RFX3-AS1-202ENST00000427722 KNDC1Q76NI1 1749 aa13.38□□□□□ -0.27
RFX3-AS1-202ENST00000427722 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
RFX3-AS1-202ENST00000427722 TRIM26Q12899 539 aaPredicted RBP13.37□□□□□ -0.27
RFX3-AS1-202ENST00000427722 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
RFX3-AS1-202ENST00000427722 ORAI2Q96SN7 254 aa13.37□□□□□ -0.27
RFX3-AS1-202ENST00000427722 POGKQ9P215 609 aa13.36□□□□□ -0.27
RFX3-AS1-202ENST00000427722 ESCO1Q5FWF5 840 aa13.35□□□□□ -0.27
RFX3-AS1-202ENST00000427722 SIRT1Q96EB6 747 aa13.35□□□□□ -0.27
RFX3-AS1-202ENST00000427722 TRAK1Q9UPV9 953 aa13.35□□□□□ -0.27
RFX3-AS1-202ENST00000427722 SPATA31A6Q5VVP1 1343 aa13.35□□□□□ -0.27
RFX3-AS1-202ENST00000427722 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
RFX3-AS1-202ENST00000427722 LRP6O75581 1613 aa13.34□□□□□ -0.27
RFX3-AS1-202ENST00000427722 NHSL1Q5SYE7 1610 aa13.34□□□□□ -0.27
RFX3-AS1-202ENST00000427722 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
RFX3-AS1-202ENST00000427722 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
RFX3-AS1-202ENST00000427722 NUTM2BA6NNL0 878 aaPredicted RBP13.32□□□□□ -0.28
RFX3-AS1-202ENST00000427722 NUTM2EB1AL46 878 aaPredicted RBP13.32□□□□□ -0.28
RFX3-AS1-202ENST00000427722 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
RFX3-AS1-202ENST00000427722 MEX3CQ5U5Q3 659 aaKnown RBP13.32□□□□□ -0.28
RFX3-AS1-202ENST00000427722 NUTM2AQ8IVF1 878 aaPredicted RBP13.32□□□□□ -0.28
RFX3-AS1-202ENST00000427722 LRRC59Q96AG4 307 aaKnown RBP13.32□□□□□ -0.28
RFX3-AS1-202ENST00000427722 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
RFX3-AS1-202ENST00000427722 NPHP3Q7Z494 1330 aa13.32□□□□□ -0.28
RFX3-AS1-202ENST00000427722 PNPLA6Q8IY17 1366 aa13.32□□□□□ -0.28
RFX3-AS1-202ENST00000427722 XPCQ01831 940 aaPredicted RBP13.31□□□□□ -0.28
RFX3-AS1-202ENST00000427722 HIRIP3Q9BW71 556 aaPredicted RBP13.31□□□□□ -0.28
RFX3-AS1-202ENST00000427722 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
RFX3-AS1-202ENST00000427722 FOXO3O43524 673 aa13.3□□□□□ -0.28
RFX3-AS1-202ENST00000427722 PRKAR2AP13861 404 aaKnown RBP13.3□□□□□ -0.28
RFX3-AS1-202ENST00000427722 L3MBTL2Q969R5 705 aa13.3□□□□□ -0.28
RFX3-AS1-202ENST00000427722 MINK1Q8N4C8 1332 aaPredicted RBP13.3□□□□□ -0.28
RFX3-AS1-202ENST00000427722 SHPRHQ149N8 1683 aa13.3□□□□□ -0.28
RFX3-AS1-202ENST00000427722 SOCS7O14512 581 aa13.28□□□□□ -0.28
RFX3-AS1-202ENST00000427722 NBPF1Q3BBV0 1214 aa13.28□□□□□ -0.28
RFX3-AS1-202ENST00000427722 PXDNQ92626 1479 aa13.28□□□□□ -0.28
RFX3-AS1-202ENST00000427722 ADGRB2O60241 1585 aa13.28□□□□□ -0.28
RFX3-AS1-202ENST00000427722 FMN2Q9NZ56 1722 aa13.27□□□□□ -0.28
RFX3-AS1-202ENST00000427722 ANKARQ7Z5J8 1434 aa13.27□□□□□ -0.29
RFX3-AS1-202ENST00000427722 EIF3AQ14152 1382 aaKnown RBP13.26□□□□□ -0.29
RFX3-AS1-202ENST00000427722 POTEAQ6S8J7 498 aa13.26□□□□□ -0.29
RFX3-AS1-202ENST00000427722 PHF8Q9UPP1 1060 aa13.26□□□□□ -0.29
RFX3-AS1-202ENST00000427722 PRR36Q9H6K5 1346 aa13.24□□□□□ -0.29
RFX3-AS1-202ENST00000427722 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
RFX3-AS1-202ENST00000427722 ADAMTS2O95450 1211 aa13.24□□□□□ -0.29
RFX3-AS1-202ENST00000427722 C8orf37Q96NL8 207 aa13.24□□□□□ -0.29
RFX3-AS1-202ENST00000427722 TULP4Q9NRJ4 1543 aa13.23□□□□□ -0.29
RFX3-AS1-202ENST00000427722 PMFBP1Q8TBY8 1022 aa13.23□□□□□ -0.29
RFX3-AS1-202ENST00000427722 KIF1AQ12756 1690 aa13.23□□□□□ -0.29
RFX3-AS1-202ENST00000427722 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
RFX3-AS1-202ENST00000427722 ROCK2O75116 1388 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms