RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ESF1Q9H501 851 aaKnown RBP18.61■□□□□ 0.57
APOBEC3D-202ENST00000427494 RIMS2Q9UQ26 1411 aa18.6■□□□□ 0.57
APOBEC3D-202ENST00000427494 CDCA7LQ96GN5 454 aa18.6■□□□□ 0.57
APOBEC3D-202ENST00000427494 CABP2Q9NPB3 220 aa18.6■□□□□ 0.57
APOBEC3D-202ENST00000427494 ANKRD36BQ8N2N9 1353 aa18.59■□□□□ 0.57
APOBEC3D-202ENST00000427494 B4GALNT3Q6L9W6 998 aa18.59■□□□□ 0.57
APOBEC3D-202ENST00000427494 MORC1Q86VD1 984 aa18.59■□□□□ 0.57
APOBEC3D-202ENST00000427494 RCAN3Q9UKA8 241 aa18.59■□□□□ 0.57
APOBEC3D-202ENST00000427494 ZMYM3Q14202 1370 aa18.58■□□□□ 0.56
APOBEC3D-202ENST00000427494 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
APOBEC3D-202ENST00000427494 POGKQ9P215 609 aa18.57■□□□□ 0.56
APOBEC3D-202ENST00000427494 CGNL1Q0VF96 1302 aa18.56■□□□□ 0.56
APOBEC3D-202ENST00000427494 SETD1AO15047 1707 aaKnown RBP18.56■□□□□ 0.56
APOBEC3D-202ENST00000427494 RRP1P56182 461 aaKnown RBP18.56■□□□□ 0.56
APOBEC3D-202ENST00000427494 MINK1Q8N4C8 1332 aaPredicted RBP18.56■□□□□ 0.56
APOBEC3D-202ENST00000427494 SRPK2P78362 688 aaKnown RBP18.55■□□□□ 0.56
APOBEC3D-202ENST00000427494 POLR3AO14802 1390 aaPredicted RBP18.55■□□□□ 0.56
APOBEC3D-202ENST00000427494 PLEKHH1Q9ULM0 1364 aa18.55■□□□□ 0.56
APOBEC3D-202ENST00000427494 NINLQ9Y2I6 1382 aa18.55■□□□□ 0.56
APOBEC3D-202ENST00000427494 CCDC146Q8IYE0 955 aa18.53■□□□□ 0.56
APOBEC3D-202ENST00000427494 TNNT2P45379 298 aaPredicted RBP18.53■□□□□ 0.56
APOBEC3D-202ENST00000427494 NSD2O96028 1365 aa18.52■□□□□ 0.56
APOBEC3D-202ENST00000427494 ATAD2Q6PL18 1390 aa18.52■□□□□ 0.56
APOBEC3D-202ENST00000427494 SHPRHQ149N8 1683 aa18.52■□□□□ 0.56
APOBEC3D-202ENST00000427494 DLC1Q96QB1 1528 aa18.52■□□□□ 0.56
APOBEC3D-202ENST00000427494 ADRA2BP18089 450 aa18.51■□□□□ 0.55
APOBEC3D-202ENST00000427494 NRXN3Q9Y4C0 1643 aa18.51■□□□□ 0.55
APOBEC3D-202ENST00000427494 A0A1W2PP64 1363 aa18.51■□□□□ 0.55
APOBEC3D-202ENST00000427494 TNRQ92752 1358 aa18.5■□□□□ 0.55
APOBEC3D-202ENST00000427494 ZNF521Q96K83 1311 aa18.5■□□□□ 0.55
APOBEC3D-202ENST00000427494 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.5■□□□□ 0.55
APOBEC3D-202ENST00000427494 APAF1O14727 1248 aa18.48■□□□□ 0.55
APOBEC3D-202ENST00000427494 CCDC136Q96JN2 1154 aa18.48■□□□□ 0.55
APOBEC3D-202ENST00000427494 ABCC11Q96J66 1382 aa18.47■□□□□ 0.55
APOBEC3D-202ENST00000427494 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
APOBEC3D-202ENST00000427494 CDK19Q9BWU1 502 aa18.47■□□□□ 0.55
APOBEC3D-202ENST00000427494 UBR1Q8IWV7 1749 aa18.47■□□□□ 0.55
APOBEC3D-202ENST00000427494 TERF2IPQ9NYB0 399 aa18.46■□□□□ 0.55
APOBEC3D-202ENST00000427494 ANKRD26Q9UPS8 1709 aa18.46■□□□□ 0.55
APOBEC3D-202ENST00000427494 CD163L1Q9NR16 1453 aa18.45■□□□□ 0.54
APOBEC3D-202ENST00000427494 MTHFSP49914 203 aa18.45■□□□□ 0.54
APOBEC3D-202ENST00000427494 DUSP27Q5VZP5 1158 aa18.45■□□□□ 0.54
APOBEC3D-202ENST00000427494 WAPLQ7Z5K2 1190 aa18.44■□□□□ 0.54
APOBEC3D-202ENST00000427494 CFAP53Q96M91 514 aa18.44■□□□□ 0.54
APOBEC3D-202ENST00000427494 HDGFP51858 240 aaKnown RBP18.44■□□□□ 0.54
APOBEC3D-202ENST00000427494 RBM19Q9Y4C8 960 aaKnown RBP18.44■□□□□ 0.54
APOBEC3D-202ENST00000427494 EXOC6Q8TAG9 804 aa18.43■□□□□ 0.54
APOBEC3D-202ENST00000427494 KNDC1Q76NI1 1749 aa18.43■□□□□ 0.54
APOBEC3D-202ENST00000427494 METP08581 1390 aa18.43■□□□□ 0.54
APOBEC3D-202ENST00000427494 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
APOBEC3D-202ENST00000427494 HDGFL2Q7Z4V5 671 aaPredicted RBP18.42■□□□□ 0.54
APOBEC3D-202ENST00000427494 NGEFQ8N5V2 710 aa18.42■□□□□ 0.54
APOBEC3D-202ENST00000427494 KIF20BQ96Q89 1820 aa18.41■□□□□ 0.54
APOBEC3D-202ENST00000427494 TMEM2Q9UHN6 1383 aa18.41■□□□□ 0.54
APOBEC3D-202ENST00000427494 PLIN1O60240 522 aa18.41■□□□□ 0.54
APOBEC3D-202ENST00000427494 GGNBP2Q9H3C7 697 aa18.41■□□□□ 0.54
APOBEC3D-202ENST00000427494 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
APOBEC3D-202ENST00000427494 MED14O60244 1454 aa18.39■□□□□ 0.53
APOBEC3D-202ENST00000427494 RUNDC1Q96C34 613 aa18.39■□□□□ 0.53
APOBEC3D-202ENST00000427494 NLRP1Q9C000 1473 aa18.38■□□□□ 0.53
APOBEC3D-202ENST00000427494 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
APOBEC3D-202ENST00000427494 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
APOBEC3D-202ENST00000427494 FYB1O15117 783 aa18.37■□□□□ 0.53
APOBEC3D-202ENST00000427494 CPS1P31327 1500 aa18.37■□□□□ 0.53
APOBEC3D-202ENST00000427494 ATP7BP35670 1465 aa18.37■□□□□ 0.53
APOBEC3D-202ENST00000427494 C3P01024 1663 aa18.37■□□□□ 0.53
APOBEC3D-202ENST00000427494 E9PSI1 815 aa18.37■□□□□ 0.53
APOBEC3D-202ENST00000427494 TXNDC2Q86VQ3 553 aa18.37■□□□□ 0.53
APOBEC3D-202ENST00000427494 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
APOBEC3D-202ENST00000427494 TECPR2O15040 1411 aa18.36■□□□□ 0.53
APOBEC3D-202ENST00000427494 NKTRP30414 1462 aaKnown RBP18.36■□□□□ 0.53
APOBEC3D-202ENST00000427494 FER1L4A9Z1Z3 1794 aa18.36■□□□□ 0.53
APOBEC3D-202ENST00000427494 FAM135BQ49AJ0 1406 aa18.35■□□□□ 0.53
APOBEC3D-202ENST00000427494 CEBPAP49715 358 aaPredicted RBP18.35■□□□□ 0.53
APOBEC3D-202ENST00000427494 WASLO00401 505 aaPredicted RBP18.34■□□□□ 0.53
APOBEC3D-202ENST00000427494 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
APOBEC3D-202ENST00000427494 WWC1Q8IX03 1113 aa18.33■□□□□ 0.53
APOBEC3D-202ENST00000427494 TCP11L2Q8N4U5 519 aa18.33■□□□□ 0.53
APOBEC3D-202ENST00000427494 CRBNQ96SW2 442 aa18.33■□□□□ 0.53
APOBEC3D-202ENST00000427494 U2AF1L5P0DN76 240 aaPredicted RBP18.33■□□□□ 0.52
APOBEC3D-202ENST00000427494 U2AF1Q01081 240 aaKnown RBP eCLIP18.33■□□□□ 0.52
APOBEC3D-202ENST00000427494 SIRT1Q96EB6 747 aa18.33■□□□□ 0.52
APOBEC3D-202ENST00000427494 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
APOBEC3D-202ENST00000427494 COL3A1P02461 1466 aaPredicted RBP18.33■□□□□ 0.52
APOBEC3D-202ENST00000427494 PPIP5K1Q6PFW1 1433 aa18.32■□□□□ 0.52
APOBEC3D-202ENST00000427494 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
APOBEC3D-202ENST00000427494 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
APOBEC3D-202ENST00000427494 PLEKHG1Q9ULL1 1385 aa18.32■□□□□ 0.52
APOBEC3D-202ENST00000427494 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
APOBEC3D-202ENST00000427494 C20orf194Q5TEA3 1177 aa18.3■□□□□ 0.52
APOBEC3D-202ENST00000427494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.3■□□□□ 0.52
APOBEC3D-202ENST00000427494 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.3■□□□□ 0.52
APOBEC3D-202ENST00000427494 ADGRB2O60241 1585 aa18.3■□□□□ 0.52
APOBEC3D-202ENST00000427494 LTKP29376 864 aa18.3■□□□□ 0.52
APOBEC3D-202ENST00000427494 CDC42BPGQ6DT37 1551 aa18.29■□□□□ 0.52
APOBEC3D-202ENST00000427494 CPSF1Q10570 1443 aaKnown RBP18.28■□□□□ 0.52
APOBEC3D-202ENST00000427494 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
APOBEC3D-202ENST00000427494 NUDT16Q96DE0 195 aaKnown RBP18.28■□□□□ 0.52
APOBEC3D-202ENST00000427494 ROBO2Q9HCK4 1378 aa18.28■□□□□ 0.52
APOBEC3D-202ENST00000427494 EDC4Q6P2E9 1401 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms