RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 NALCNQ8IZF0 1738 aa15.38■□□□□ 0.05
SYNC-204ENST00000426909 SIRT1Q96EB6 747 aa15.35■□□□□ 0.05
SYNC-204ENST00000426909 MST1RQ04912 1400 aa15.34■□□□□ 0.05
SYNC-204ENST00000426909 ADGRB1O14514 1584 aa15.34■□□□□ 0.05
SYNC-204ENST00000426909 HSPA5P11021 654 aaKnown RBP15.34■□□□□ 0.05
SYNC-204ENST00000426909 NBPF8Q3BBV2 869 aa15.34■□□□□ 0.05
SYNC-204ENST00000426909 DDX10Q13206 875 aaKnown RBP15.33■□□□□ 0.04
SYNC-204ENST00000426909 RALGAPBQ86X10 1494 aa15.33■□□□□ 0.04
SYNC-204ENST00000426909 DLC1Q96QB1 1528 aa15.33■□□□□ 0.04
SYNC-204ENST00000426909 CDC42BPGQ6DT37 1551 aa15.32■□□□□ 0.04
SYNC-204ENST00000426909 WAPLQ7Z5K2 1190 aa15.32■□□□□ 0.04
SYNC-204ENST00000426909 BRINP3Q76B58 766 aa15.31■□□□□ 0.04
SYNC-204ENST00000426909 PLEKHH1Q9ULM0 1364 aa15.31■□□□□ 0.04
SYNC-204ENST00000426909 KIAA1210Q9ULL0 1709 aa15.31■□□□□ 0.04
SYNC-204ENST00000426909 PHLPP1O60346 1717 aa15.3■□□□□ 0.04
SYNC-204ENST00000426909 POGKQ9P215 609 aa15.3■□□□□ 0.04
SYNC-204ENST00000426909 AHDC1Q5TGY3 1603 aaPredicted RBP15.29■□□□□ 0.04
SYNC-204ENST00000426909 C1orf167Q5SNV9 1468 aa15.29■□□□□ 0.04
SYNC-204ENST00000426909 PRAM1Q96QH2 718 aa15.29■□□□□ 0.04
SYNC-204ENST00000426909 TRAK1Q9UPV9 953 aa15.29■□□□□ 0.04
SYNC-204ENST00000426909 HIRIP3Q9BW71 556 aaPredicted RBP15.28■□□□□ 0.04
SYNC-204ENST00000426909 CCER2I3L3R5 266 aa15.27■□□□□ 0.04
SYNC-204ENST00000426909 ANP32CO43423 234 aa15.27■□□□□ 0.04
SYNC-204ENST00000426909 DISP3Q9P2K9 1392 aa15.25■□□□□ 0.03
SYNC-204ENST00000426909 COL16A1Q07092 1604 aaPredicted RBP15.25■□□□□ 0.03
SYNC-204ENST00000426909 SAFB2Q14151 953 aaKnown RBP eCLIP15.25■□□□□ 0.03
SYNC-204ENST00000426909 NHSL1Q5SYE7 1610 aa15.25■□□□□ 0.03
SYNC-204ENST00000426909 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
SYNC-204ENST00000426909 JCADQ9P266 1359 aa15.24■□□□□ 0.03
SYNC-204ENST00000426909 WASHC2AQ641Q2 1341 aa15.24■□□□□ 0.03
SYNC-204ENST00000426909 MED1Q15648 1581 aaPredicted RBP15.24■□□□□ 0.03
SYNC-204ENST00000426909 USP47Q96K76 1375 aa15.24■□□□□ 0.03
SYNC-204ENST00000426909 FMN2Q9NZ56 1722 aa15.23■□□□□ 0.03
SYNC-204ENST00000426909 NBPF1Q3BBV0 1214 aa15.23■□□□□ 0.03
SYNC-204ENST00000426909 ESCO1Q5FWF5 840 aa15.23■□□□□ 0.03
SYNC-204ENST00000426909 ORAI2Q96SN7 254 aa15.23■□□□□ 0.03
SYNC-204ENST00000426909 ADGRB2O60241 1585 aa15.23■□□□□ 0.03
SYNC-204ENST00000426909 ARHGEF28Q8N1W1 1705 aaKnown RBP15.23■□□□□ 0.03
SYNC-204ENST00000426909 TRPM1Q7Z4N2 1603 aa15.21■□□□□ 0.03
SYNC-204ENST00000426909 NUTM2FA1L443 756 aa15.21■□□□□ 0.03
SYNC-204ENST00000426909 EIF3AQ14152 1382 aaKnown RBP15.21■□□□□ 0.02
SYNC-204ENST00000426909 MINK1Q8N4C8 1332 aaPredicted RBP15.2■□□□□ 0.02
SYNC-204ENST00000426909 LRRC59Q96AG4 307 aaKnown RBP15.2■□□□□ 0.02
SYNC-204ENST00000426909 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
SYNC-204ENST00000426909 ROCK2O75116 1388 aaKnown RBP15.2■□□□□ 0.02
SYNC-204ENST00000426909 GPRASP1Q5JY77 1395 aa15.2■□□□□ 0.02
SYNC-204ENST00000426909 NPHP3Q7Z494 1330 aa15.19■□□□□ 0.02
SYNC-204ENST00000426909 KIF1AQ12756 1690 aa15.19■□□□□ 0.02
SYNC-204ENST00000426909 SPATA31A6Q5VVP1 1343 aa15.18■□□□□ 0.02
SYNC-204ENST00000426909 ANKARQ7Z5J8 1434 aa15.18■□□□□ 0.02
SYNC-204ENST00000426909 DDX17Q92841 729 aaKnown RBP15.18■□□□□ 0.02
SYNC-204ENST00000426909 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
SYNC-204ENST00000426909 CARD11Q9BXL7 1154 aa15.18■□□□□ 0.02
SYNC-204ENST00000426909 SHPRHQ149N8 1683 aa15.18■□□□□ 0.02
SYNC-204ENST00000426909 WASLO00401 505 aaPredicted RBP15.17■□□□□ 0.02
SYNC-204ENST00000426909 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
SYNC-204ENST00000426909 CENPJQ9HC77 1338 aaPredicted RBP15.17■□□□□ 0.02
SYNC-204ENST00000426909 TULP4Q9NRJ4 1543 aa15.16■□□□□ 0.02
SYNC-204ENST00000426909 KIF7Q2M1P5 1343 aa15.16■□□□□ 0.02
SYNC-204ENST00000426909 FOXO3O43524 673 aa15.15■□□□□ 0.02
SYNC-204ENST00000426909 PHF8Q9UPP1 1060 aa15.15■□□□□ 0.02
SYNC-204ENST00000426909 PXDNQ92626 1479 aa15.14■□□□□ 0.01
SYNC-204ENST00000426909 USP32Q8NFA0 1604 aa15.14■□□□□ 0.01
SYNC-204ENST00000426909 C11orf95C9JLR9 678 aaPredicted RBP15.13■□□□□ 0.01
SYNC-204ENST00000426909 PNPLA6Q8IY17 1366 aa15.12■□□□□ 0.01
SYNC-204ENST00000426909 QRICH2Q9H0J4 1663 aa15.12■□□□□ 0.01
SYNC-204ENST00000426909 PSME1Q06323 249 aa15.11■□□□□ 0.01
SYNC-204ENST00000426909 MEX3CQ5U5Q3 659 aaKnown RBP15.11■□□□□ 0.01
SYNC-204ENST00000426909 CDK19Q9BWU1 502 aa15.11■□□□□ 0.01
SYNC-204ENST00000426909 RGPD8O14715 1765 aaPredicted RBP15.11■□□□□ 0.01
SYNC-204ENST00000426909 ATP7BP35670 1465 aa15.1■□□□□ 0.01
SYNC-204ENST00000426909 ITSN1Q15811 1721 aa15.1■□□□□ 0.01
SYNC-204ENST00000426909 XPCQ01831 940 aaPredicted RBP15.1■□□□□ 0.01
SYNC-204ENST00000426909 LRP6O75581 1613 aa15.1■□□□□ 0.01
SYNC-204ENST00000426909 NUTM2BA6NNL0 878 aaPredicted RBP15.09■□□□□ 0.01
SYNC-204ENST00000426909 NUTM2EB1AL46 878 aaPredicted RBP15.09■□□□□ 0.01
SYNC-204ENST00000426909 KRT28Q7Z3Y7 464 aa15.09■□□□□ 0.01
SYNC-204ENST00000426909 NUTM2AQ8IVF1 878 aaPredicted RBP15.09■□□□□ 0.01
SYNC-204ENST00000426909 PMFBP1Q8TBY8 1022 aa15.09■□□□□ 0.01
SYNC-204ENST00000426909 NUDT16Q96DE0 195 aaKnown RBP15.09■□□□□ 0.01
SYNC-204ENST00000426909 PRR36Q9H6K5 1346 aa15.09■□□□□ 0.01
SYNC-204ENST00000426909 COL22A1Q8NFW1 1626 aaPredicted RBP15.08■□□□□ 0
SYNC-204ENST00000426909 SRPK2P78362 688 aaKnown RBP15.08■□□□□ 0
SYNC-204ENST00000426909 NGDNQ8NEJ9 315 aaKnown RBP15.07■□□□□ 0
SYNC-204ENST00000426909 EVC2Q86UK5 1308 aa15.07■□□□□ 0
SYNC-204ENST00000426909 ST20-MTHFSA0A0A6YYL1 179 aa15.06■□□□□ 0
SYNC-204ENST00000426909 CCDC61Q9Y6R9 512 aa15.06■□□□□ 0
SYNC-204ENST00000426909 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
SYNC-204ENST00000426909 SBNO1A3KN83 1393 aa15.06■□□□□ 0
SYNC-204ENST00000426909 TNS3Q68CZ2 1445 aa15.06■□□□□ 0
SYNC-204ENST00000426909 TOPAZ1Q8N9V7 1692 aa15.05■□□□□ -0
SYNC-204ENST00000426909 ARHGEF10O15013 1369 aa15.04■□□□□ -0
SYNC-204ENST00000426909 SBNO2Q9Y2G9 1366 aa15.04■□□□□ -0
SYNC-204ENST00000426909 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
SYNC-204ENST00000426909 CABP2Q9NPB3 220 aa15.04■□□□□ -0
SYNC-204ENST00000426909 PPIP5K1Q6PFW1 1433 aa15.03■□□□□ -0
SYNC-204ENST00000426909 KTN1Q86UP2 1357 aaKnown RBP15.03■□□□□ -0
SYNC-204ENST00000426909 SLC24A1O60721 1099 aa15.03■□□□□ -0
SYNC-204ENST00000426909 ILDR2Q71H61 639 aa15.03■□□□□ -0
SYNC-204ENST00000426909 RGS17Q9UGC6 210 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms