RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 IFFO2Q5TF58 517 aa24.13■■□□□ 1.45
HCG18-235ENST00000426882 CCDC34Q96HJ3 373 aa24.12■■□□□ 1.45
HCG18-235ENST00000426882 BACH2Q9BYV9 841 aa24.12■■□□□ 1.45
HCG18-235ENST00000426882 FAM184AQ8NB25 1140 aa24.11■■□□□ 1.45
HCG18-235ENST00000426882 CDC45O75419 566 aa24.1■■□□□ 1.45
HCG18-235ENST00000426882 IQGAP2Q13576 1575 aa24.1■■□□□ 1.45
HCG18-235ENST00000426882 ABCC5O15440 1437 aa24.09■■□□□ 1.45
HCG18-235ENST00000426882 DDX58O95786 925 aaKnown RBP24.09■■□□□ 1.45
HCG18-235ENST00000426882 NLRP6P59044 892 aa24.08■■□□□ 1.45
HCG18-235ENST00000426882 PTPN23Q9H3S7 1636 aa24.07■■□□□ 1.44
HCG18-235ENST00000426882 NUCB2P80303 420 aa24.07■■□□□ 1.44
HCG18-235ENST00000426882 NUTM2GQ5VZR2 741 aa24.07■■□□□ 1.44
HCG18-235ENST00000426882 G3BP1Q13283 466 aaKnown RBP eCLIP24.06■■□□□ 1.44
HCG18-235ENST00000426882 TWISTNBQ3B726 338 aaPredicted RBP24.05■■□□□ 1.44
HCG18-235ENST00000426882 WDR63Q8IWG1 891 aa24.05■■□□□ 1.44
HCG18-235ENST00000426882 ARHGEF11O15085 1522 aa24.05■■□□□ 1.44
HCG18-235ENST00000426882 CABP1Q9NZU7 370 aa24.05■■□□□ 1.44
HCG18-235ENST00000426882 NOB1Q9ULX3 412 aaKnown RBP24.05■■□□□ 1.44
HCG18-235ENST00000426882 GTF2E1P29083 439 aaPredicted RBP24.05■■□□□ 1.44
HCG18-235ENST00000426882 HSP90AB4PQ58FF6 505 aa24.04■■□□□ 1.44
HCG18-235ENST00000426882 FRAT2O75474 233 aaPredicted RBP24.04■■□□□ 1.44
HCG18-235ENST00000426882 CAMSAP2Q08AD1 1489 aa24.03■■□□□ 1.44
HCG18-235ENST00000426882 CDK19Q9BWU1 502 aa24.03■■□□□ 1.44
HCG18-235ENST00000426882 SLC52A1Q9NWF4 448 aa24.03■■□□□ 1.44
HCG18-235ENST00000426882 UBTFL1P0CB47 393 aaPredicted RBP24.02■■□□□ 1.44
HCG18-235ENST00000426882 CHMP4CQ96CF2 233 aa24.02■■□□□ 1.44
HCG18-235ENST00000426882 C1orf115Q9H7X2 142 aa24.02■■□□□ 1.44
HCG18-235ENST00000426882 RSPH6AQ9H0K4 717 aa24.02■■□□□ 1.44
HCG18-235ENST00000426882 CUL7Q14999 1698 aa24.02■■□□□ 1.44
HCG18-235ENST00000426882 TXNDC2Q86VQ3 553 aa24.01■■□□□ 1.43
HCG18-235ENST00000426882 MCTP1Q6DN14 999 aa24.01■■□□□ 1.43
HCG18-235ENST00000426882 CCDC141Q6ZP82 1450 aa24.01■■□□□ 1.43
HCG18-235ENST00000426882 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
HCG18-235ENST00000426882 PLB1Q6P1J6 1458 aa24.01■■□□□ 1.43
HCG18-235ENST00000426882 RASSF8Q8NHQ8 419 aa24■■□□□ 1.43
HCG18-235ENST00000426882 RNF20Q5VTR2 975 aa24■■□□□ 1.43
HCG18-235ENST00000426882 EVA1CP58658 441 aa24■■□□□ 1.43
HCG18-235ENST00000426882 LRRFIP1Q32MZ4 808 aaKnown RBP23.99■■□□□ 1.43
HCG18-235ENST00000426882 ERC2O15083 957 aa23.99■■□□□ 1.43
HCG18-235ENST00000426882 GOLGA6L19H0YKK7 550 aa23.99■■□□□ 1.43
HCG18-235ENST00000426882 SLFN5Q08AF3 891 aa23.99■■□□□ 1.43
HCG18-235ENST00000426882 GNAI3P08754 354 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 ATF7IPQ6VMQ6 1270 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 RAPGEF4Q8WZA2 1011 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 NINLQ9Y2I6 1382 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 BECN2A8MW95 431 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 CT47B1P0C2W7 299 aaPredicted RBP23.98■■□□□ 1.43
HCG18-235ENST00000426882 GAS2L2Q8NHY3 880 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 SMC3Q9UQE7 1217 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 PEG3Q9GZU2 1588 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 RAPGEF3O95398 923 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 GCC1Q96CN9 775 aa23.98■■□□□ 1.43
HCG18-235ENST00000426882 VPS37CA5D8V6 355 aaPredicted RBP23.97■■□□□ 1.43
HCG18-235ENST00000426882 MVPQ14764 893 aaKnown RBP23.97■■□□□ 1.43
HCG18-235ENST00000426882 NCOA1Q15788 1441 aa23.96■■□□□ 1.43
HCG18-235ENST00000426882 RPGRIP1LQ68CZ1 1315 aa23.96■■□□□ 1.43
HCG18-235ENST00000426882 AIMP1Q12904 312 aaKnown RBP23.96■■□□□ 1.43
HCG18-235ENST00000426882 SULT6B1Q6IMI4 303 aa23.96■■□□□ 1.43
HCG18-235ENST00000426882 WWC1Q8IX03 1113 aa23.96■■□□□ 1.43
HCG18-235ENST00000426882 CCDC30Q5VVM6 783 aa23.95■■□□□ 1.43
HCG18-235ENST00000426882 CPLX2Q6PUV4 134 aaKnown RBP23.94■■□□□ 1.42
HCG18-235ENST00000426882 DNAJC5BQ9UF47 199 aa23.94■■□□□ 1.42
HCG18-235ENST00000426882 CREBRFQ8IUR6 639 aa23.94■■□□□ 1.42
HCG18-235ENST00000426882 RIC3Q7Z5B4 369 aa23.94■■□□□ 1.42
HCG18-235ENST00000426882 SURF6O75683 361 aaKnown RBP23.93■■□□□ 1.42
HCG18-235ENST00000426882 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
HCG18-235ENST00000426882 ABTB2Q8N961 1025 aa23.93■■□□□ 1.42
HCG18-235ENST00000426882 NLRP2Q9NX02 1062 aa23.93■■□□□ 1.42
HCG18-235ENST00000426882 RPRD2Q5VT52 1461 aaKnown RBP23.93■■□□□ 1.42
HCG18-235ENST00000426882 NSD3Q9BZ95 1437 aa23.93■■□□□ 1.42
HCG18-235ENST00000426882 TRAK2O60296 914 aa23.92■■□□□ 1.42
HCG18-235ENST00000426882 CLSTN1O94985 981 aa23.92■■□□□ 1.42
HCG18-235ENST00000426882 HSP90AA2PQ14568 343 aaPredicted RBP23.92■■□□□ 1.42
HCG18-235ENST00000426882 BICD2Q8TD16 824 aa23.91■■□□□ 1.42
HCG18-235ENST00000426882 SLC4A2P04920 1241 aa23.91■■□□□ 1.42
HCG18-235ENST00000426882 ZNF692Q9BU19 519 aaPredicted RBP23.9■■□□□ 1.42
HCG18-235ENST00000426882 TMX4Q9H1E5 349 aaPredicted RBP23.9■■□□□ 1.42
HCG18-235ENST00000426882 BIVM-ERCC5R4GMW8 1640 aa23.9■■□□□ 1.42
HCG18-235ENST00000426882 CPLX1O14810 134 aa23.9■■□□□ 1.42
HCG18-235ENST00000426882 ATAD2Q6PL18 1390 aa23.9■■□□□ 1.42
HCG18-235ENST00000426882 SYNE3Q6ZMZ3 975 aa23.9■■□□□ 1.42
HCG18-235ENST00000426882 CLASRPQ8N2M8 674 aaKnown RBP23.9■■□□□ 1.42
HCG18-235ENST00000426882 MRE11P49959 708 aa23.89■■□□□ 1.42
HCG18-235ENST00000426882 APPP05067 770 aa23.89■■□□□ 1.41
HCG18-235ENST00000426882 NEK4P51957 841 aa23.89■■□□□ 1.41
HCG18-235ENST00000426882 AKAP17AQ02040 695 aaKnown RBP23.88■■□□□ 1.41
HCG18-235ENST00000426882 RTEL1-TNFRSF6BF6WH68 1400 aa23.88■■□□□ 1.41
HCG18-235ENST00000426882 RABEP1Q15276 862 aa23.87■■□□□ 1.41
HCG18-235ENST00000426882 GNAI2P04899 355 aa23.87■■□□□ 1.41
HCG18-235ENST00000426882 C20orf194Q5TEA3 1177 aa23.87■■□□□ 1.41
HCG18-235ENST00000426882 GRIN2AQ12879 1464 aa23.86■■□□□ 1.41
HCG18-235ENST00000426882 CNTROBQ8N137 903 aa23.86■■□□□ 1.41
HCG18-235ENST00000426882 TMPOP42166 694 aaKnown RBP23.86■■□□□ 1.41
HCG18-235ENST00000426882 NEUROD6Q96NK8 337 aa23.86■■□□□ 1.41
HCG18-235ENST00000426882 FCHSD2O94868 740 aa23.86■■□□□ 1.41
HCG18-235ENST00000426882 TRDNQ13061 729 aa23.85■■□□□ 1.41
HCG18-235ENST00000426882 SYTL4Q96C24 671 aaPredicted RBP23.84■■□□□ 1.41
HCG18-235ENST00000426882 URB2Q14146 1524 aaKnown RBP23.84■■□□□ 1.41
HCG18-235ENST00000426882 HDGFL1Q5TGJ6 251 aa23.83■■□□□ 1.41
HCG18-235ENST00000426882 GPRASP1Q5JY77 1395 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms