RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 PHLPP1O60346 1717 aa24.9■■□□□ 1.58
LMCD1-204ENST00000426878 NEUROD1Q13562 356 aa24.88■■□□□ 1.57
LMCD1-204ENST00000426878 PRAM1Q96QH2 718 aa24.87■■□□□ 1.57
LMCD1-204ENST00000426878 COL16A1Q07092 1604 aaPredicted RBP24.87■■□□□ 1.57
LMCD1-204ENST00000426878 TRAK1Q9UPV9 953 aa24.86■■□□□ 1.57
LMCD1-204ENST00000426878 POGKQ9P215 609 aa24.84■■□□□ 1.57
LMCD1-204ENST00000426878 DISP3Q9P2K9 1392 aa24.83■■□□□ 1.57
LMCD1-204ENST00000426878 NHSL1Q5SYE7 1610 aa24.83■■□□□ 1.57
LMCD1-204ENST00000426878 MED1Q15648 1581 aaPredicted RBP24.82■■□□□ 1.56
LMCD1-204ENST00000426878 ORAI2Q96SN7 254 aa24.82■■□□□ 1.56
LMCD1-204ENST00000426878 JCADQ9P266 1359 aa24.82■■□□□ 1.56
LMCD1-204ENST00000426878 FMN2Q9NZ56 1722 aa24.8■■□□□ 1.56
LMCD1-204ENST00000426878 NBPF1Q3BBV0 1214 aa24.79■■□□□ 1.56
LMCD1-204ENST00000426878 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
LMCD1-204ENST00000426878 SAFB2Q14151 953 aaKnown RBP eCLIP24.78■■□□□ 1.56
LMCD1-204ENST00000426878 ADGRB2O60241 1585 aa24.78■■□□□ 1.56
LMCD1-204ENST00000426878 ARHGEF28Q8N1W1 1705 aaKnown RBP24.77■■□□□ 1.56
LMCD1-204ENST00000426878 ESCO1Q5FWF5 840 aa24.76■■□□□ 1.55
LMCD1-204ENST00000426878 LRRC59Q96AG4 307 aaKnown RBP24.75■■□□□ 1.55
LMCD1-204ENST00000426878 DDX17Q92841 729 aaKnown RBP24.74■■□□□ 1.55
LMCD1-204ENST00000426878 SOS2Q07890 1332 aaPredicted RBP24.74■■□□□ 1.55
LMCD1-204ENST00000426878 TRPM1Q7Z4N2 1603 aa24.73■■□□□ 1.55
LMCD1-204ENST00000426878 NUTM2FA1L443 756 aa24.73■■□□□ 1.55
LMCD1-204ENST00000426878 SHPRHQ149N8 1683 aa24.73■■□□□ 1.55
LMCD1-204ENST00000426878 TONSLQ96HA7 1378 aa24.72■■□□□ 1.55
LMCD1-204ENST00000426878 SPATA31A6Q5VVP1 1343 aa24.72■■□□□ 1.55
LMCD1-204ENST00000426878 NPHP3Q7Z494 1330 aa24.71■■□□□ 1.55
LMCD1-204ENST00000426878 MINK1Q8N4C8 1332 aaPredicted RBP24.71■■□□□ 1.55
LMCD1-204ENST00000426878 ANKARQ7Z5J8 1434 aa24.71■■□□□ 1.55
LMCD1-204ENST00000426878 EIF3AQ14152 1382 aaKnown RBP24.69■■□□□ 1.54
LMCD1-204ENST00000426878 WASLO00401 505 aaPredicted RBP24.69■■□□□ 1.54
LMCD1-204ENST00000426878 HIRIP3Q9BW71 556 aaPredicted RBP24.69■■□□□ 1.54
LMCD1-204ENST00000426878 CLSPNQ9HAW4 1339 aa24.68■■□□□ 1.54
LMCD1-204ENST00000426878 KIF1AQ12756 1690 aa24.68■■□□□ 1.54
LMCD1-204ENST00000426878 NBPF8Q3BBV2 869 aa24.68■■□□□ 1.54
LMCD1-204ENST00000426878 FOXO3O43524 673 aa24.67■■□□□ 1.54
LMCD1-204ENST00000426878 RGPD8O14715 1765 aaPredicted RBP24.67■■□□□ 1.54
LMCD1-204ENST00000426878 ROCK2O75116 1388 aaKnown RBP24.66■■□□□ 1.54
LMCD1-204ENST00000426878 GPRASP1Q5JY77 1395 aa24.66■■□□□ 1.54
LMCD1-204ENST00000426878 PXDNQ92626 1479 aa24.66■■□□□ 1.54
LMCD1-204ENST00000426878 USP32Q8NFA0 1604 aa24.66■■□□□ 1.54
LMCD1-204ENST00000426878 TULP4Q9NRJ4 1543 aa24.65■■□□□ 1.54
LMCD1-204ENST00000426878 PNPLA6Q8IY17 1366 aa24.64■■□□□ 1.54
LMCD1-204ENST00000426878 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
LMCD1-204ENST00000426878 PHF8Q9UPP1 1060 aa24.64■■□□□ 1.54
LMCD1-204ENST00000426878 CENPJQ9HC77 1338 aaPredicted RBP24.63■■□□□ 1.53
LMCD1-204ENST00000426878 PRR36Q9H6K5 1346 aa24.61■■□□□ 1.53
LMCD1-204ENST00000426878 LRP6O75581 1613 aa24.61■■□□□ 1.53
LMCD1-204ENST00000426878 RALGAPBQ86X10 1494 aa24.59■■□□□ 1.53
LMCD1-204ENST00000426878 CDK19Q9BWU1 502 aa24.59■■□□□ 1.53
LMCD1-204ENST00000426878 ILDR2Q71H61 639 aa24.58■■□□□ 1.53
LMCD1-204ENST00000426878 RGS17Q9UGC6 210 aaPredicted RBP24.58■■□□□ 1.53
LMCD1-204ENST00000426878 TIMELESSQ9UNS1 1208 aa24.58■■□□□ 1.53
LMCD1-204ENST00000426878 XPCQ01831 940 aaPredicted RBP24.57■■□□□ 1.52
LMCD1-204ENST00000426878 KRT28Q7Z3Y7 464 aa24.57■■□□□ 1.52
LMCD1-204ENST00000426878 ATP7BP35670 1465 aa24.56■■□□□ 1.52
LMCD1-204ENST00000426878 NUDT16Q96DE0 195 aaKnown RBP24.56■■□□□ 1.52
LMCD1-204ENST00000426878 COL22A1Q8NFW1 1626 aaPredicted RBP24.56■■□□□ 1.52
LMCD1-204ENST00000426878 QRICH2Q9H0J4 1663 aa24.55■■□□□ 1.52
LMCD1-204ENST00000426878 PSME1Q06323 249 aa24.55■■□□□ 1.52
LMCD1-204ENST00000426878 PMFBP1Q8TBY8 1022 aa24.55■■□□□ 1.52
LMCD1-204ENST00000426878 SPATA31A3Q5VYP0 1347 aa24.55■■□□□ 1.52
LMCD1-204ENST00000426878 ITSN1Q15811 1721 aa24.54■■□□□ 1.52
LMCD1-204ENST00000426878 NUTM2BA6NNL0 878 aaPredicted RBP24.53■■□□□ 1.52
LMCD1-204ENST00000426878 NUTM2EB1AL46 878 aaPredicted RBP24.53■■□□□ 1.52
LMCD1-204ENST00000426878 NUTM2AQ8IVF1 878 aaPredicted RBP24.53■■□□□ 1.52
LMCD1-204ENST00000426878 CARD11Q9BXL7 1154 aa24.53■■□□□ 1.52
LMCD1-204ENST00000426878 SBNO1A3KN83 1393 aa24.52■■□□□ 1.52
LMCD1-204ENST00000426878 MEX3CQ5U5Q3 659 aaKnown RBP24.52■■□□□ 1.52
LMCD1-204ENST00000426878 CCDC61Q9Y6R9 512 aa24.52■■□□□ 1.52
LMCD1-204ENST00000426878 TNS3Q68CZ2 1445 aa24.49■■□□□ 1.51
LMCD1-204ENST00000426878 TOPAZ1Q8N9V7 1692 aa24.48■■□□□ 1.51
LMCD1-204ENST00000426878 SBNO2Q9Y2G9 1366 aa24.48■■□□□ 1.51
LMCD1-204ENST00000426878 PLEKHG3A1L390 1219 aa24.48■■□□□ 1.51
LMCD1-204ENST00000426878 SRPK2P78362 688 aaKnown RBP24.47■■□□□ 1.51
LMCD1-204ENST00000426878 NGDNQ8NEJ9 315 aaKnown RBP24.47■■□□□ 1.51
LMCD1-204ENST00000426878 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
LMCD1-204ENST00000426878 EVC2Q86UK5 1308 aa24.47■■□□□ 1.51
LMCD1-204ENST00000426878 POLR3AO14802 1390 aaPredicted RBP24.46■■□□□ 1.51
LMCD1-204ENST00000426878 ARHGEF10O15013 1369 aa24.45■■□□□ 1.5
LMCD1-204ENST00000426878 TRPM3Q9HCF6 1732 aaPredicted RBP24.45■■□□□ 1.5
LMCD1-204ENST00000426878 ZNF772Q68DY9 489 aaPredicted RBP24.44■■□□□ 1.5
LMCD1-204ENST00000426878 POTEAQ6S8J7 498 aa24.44■■□□□ 1.5
LMCD1-204ENST00000426878 CABP2Q9NPB3 220 aa24.44■■□□□ 1.5
LMCD1-204ENST00000426878 ADAMTS2O95450 1211 aa24.42■■□□□ 1.5
LMCD1-204ENST00000426878 ACEP12821 1306 aa24.42■■□□□ 1.5
LMCD1-204ENST00000426878 C8orf37Q96NL8 207 aa24.41■■□□□ 1.5
LMCD1-204ENST00000426878 ALS2Q96Q42 1657 aa24.4■■□□□ 1.5
LMCD1-204ENST00000426878 PPIP5K1Q6PFW1 1433 aa24.4■■□□□ 1.5
LMCD1-204ENST00000426878 AFF2P51816 1311 aa24.4■■□□□ 1.5
LMCD1-204ENST00000426878 NGLY1Q96IV0 654 aa24.38■■□□□ 1.49
LMCD1-204ENST00000426878 FNBP4Q8N3X1 1017 aaPredicted RBP24.37■■□□□ 1.49
LMCD1-204ENST00000426878 LMOD2Q6P5Q4 547 aa24.36■■□□□ 1.49
LMCD1-204ENST00000426878 CABP1Q9NZU7 370 aa24.36■■□□□ 1.49
LMCD1-204ENST00000426878 MARF1Q9Y4F3 1742 aaKnown RBP24.36■■□□□ 1.49
LMCD1-204ENST00000426878 SOCS7O14512 581 aa24.35■■□□□ 1.49
LMCD1-204ENST00000426878 SLC24A1O60721 1099 aa24.35■■□□□ 1.49
LMCD1-204ENST00000426878 BRD4O60885 1362 aaPredicted RBP24.35■■□□□ 1.49
LMCD1-204ENST00000426878 ATAD2Q6PL18 1390 aa24.35■■□□□ 1.49
LMCD1-204ENST00000426878 ST20-MTHFSA0A0A6YYL1 179 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms