RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 ANKRD30BQ9BXX2 1392 aa10.9□□□□□ -0.67
LINC01049-201ENST00000426840 NCKAP5LQ9HCH0 1330 aa10.89□□□□□ -0.67
LINC01049-201ENST00000426840 CHGAP10645 457 aaKnown RBP10.89□□□□□ -0.67
LINC01049-201ENST00000426840 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
LINC01049-201ENST00000426840 TRPM2O94759 1503 aa10.89□□□□□ -0.67
LINC01049-201ENST00000426840 CLTCL1P53675 1640 aa10.87□□□□□ -0.67
LINC01049-201ENST00000426840 LTKP29376 864 aa10.87□□□□□ -0.67
LINC01049-201ENST00000426840 ANKLE2Q86XL3 938 aa10.87□□□□□ -0.67
LINC01049-201ENST00000426840 STRCQ7RTU9 1775 aa10.87□□□□□ -0.67
LINC01049-201ENST00000426840 DHX57Q6P158 1386 aaKnown RBP10.87□□□□□ -0.67
LINC01049-201ENST00000426840 TMEM2Q9UHN6 1383 aa10.87□□□□□ -0.67
LINC01049-201ENST00000426840 TMEM131LA2VDJ0 1609 aa10.87□□□□□ -0.67
LINC01049-201ENST00000426840 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
LINC01049-201ENST00000426840 KDM5AP29375 1690 aaKnown RBP10.86□□□□□ -0.67
LINC01049-201ENST00000426840 C7P10643 843 aa10.86□□□□□ -0.67
LINC01049-201ENST00000426840 TXNDC2Q86VQ3 553 aa10.86□□□□□ -0.67
LINC01049-201ENST00000426840 TAOK2Q9UL54 1235 aa10.86□□□□□ -0.67
LINC01049-201ENST00000426840 ADGRB3O60242 1522 aa10.85□□□□□ -0.67
LINC01049-201ENST00000426840 SLIT1O75093 1534 aa10.85□□□□□ -0.67
LINC01049-201ENST00000426840 STK25O00506 426 aa10.85□□□□□ -0.67
LINC01049-201ENST00000426840 SEC24BO95487 1268 aa10.85□□□□□ -0.67
LINC01049-201ENST00000426840 BCL11BQ9C0K0 894 aaPredicted RBP10.85□□□□□ -0.67
LINC01049-201ENST00000426840 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
LINC01049-201ENST00000426840 MYO5BQ9ULV0 1848 aa10.85□□□□□ -0.67
LINC01049-201ENST00000426840 CCDC144AA2RUR9 1427 aa10.84□□□□□ -0.67
LINC01049-201ENST00000426840 MKRN3Q13064 507 aaKnown RBP10.84□□□□□ -0.67
LINC01049-201ENST00000426840 EID1Q9Y6B2 187 aa10.84□□□□□ -0.67
LINC01049-201ENST00000426840 HDGFP51858 240 aaKnown RBP10.83□□□□□ -0.68
LINC01049-201ENST00000426840 ZNF326Q5BKZ1 582 aaKnown RBP10.83□□□□□ -0.68
LINC01049-201ENST00000426840 ZFYVE9O95405 1425 aa10.83□□□□□ -0.68
LINC01049-201ENST00000426840 SPATA31E1Q6ZUB1 1445 aa10.83□□□□□ -0.68
LINC01049-201ENST00000426840 RIMS2Q9UQ26 1411 aa10.83□□□□□ -0.68
LINC01049-201ENST00000426840 MED14O60244 1454 aa10.82□□□□□ -0.68
LINC01049-201ENST00000426840 KIF1BO60333 1816 aa10.82□□□□□ -0.68
LINC01049-201ENST00000426840 RGL3Q3MIN7 710 aa10.82□□□□□ -0.68
LINC01049-201ENST00000426840 NUTM2DQ5VT03 806 aaPredicted RBP10.82□□□□□ -0.68
LINC01049-201ENST00000426840 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC01049-201ENST00000426840 COLQQ9Y215 455 aaPredicted RBP10.82□□□□□ -0.68
LINC01049-201ENST00000426840 RPGRIP1LQ68CZ1 1315 aa10.82□□□□□ -0.68
LINC01049-201ENST00000426840 EFCAB3Q8N7B9 438 aa10.81□□□□□ -0.68
LINC01049-201ENST00000426840 SIN3AQ96ST3 1273 aa10.81□□□□□ -0.68
LINC01049-201ENST00000426840 NEURL4Q96JN8 1562 aa10.81□□□□□ -0.68
LINC01049-201ENST00000426840 SCAF11Q99590 1463 aaKnown RBP10.81□□□□□ -0.68
LINC01049-201ENST00000426840 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
LINC01049-201ENST00000426840 IER5LQ5T953 404 aa10.8□□□□□ -0.68
LINC01049-201ENST00000426840 NPHP4O75161 1426 aaPredicted RBP10.8□□□□□ -0.68
LINC01049-201ENST00000426840 PLEKHG1Q9ULL1 1385 aa10.78□□□□□ -0.68
LINC01049-201ENST00000426840 POLR1AO95602 1720 aaPredicted RBP10.78□□□□□ -0.68
LINC01049-201ENST00000426840 POTEB2H3BUK9 544 aa10.78□□□□□ -0.68
LINC01049-201ENST00000426840 PLCG2P16885 1265 aa10.78□□□□□ -0.68
LINC01049-201ENST00000426840 LHX8Q68G74 356 aa10.78□□□□□ -0.68
LINC01049-201ENST00000426840 NEXMIFQ5QGS0 1516 aa10.78□□□□□ -0.68
LINC01049-201ENST00000426840 PPP1R15AO75807 674 aaPredicted RBP10.77□□□□□ -0.69
LINC01049-201ENST00000426840 IRX5P78411 483 aaPredicted RBP10.77□□□□□ -0.69
LINC01049-201ENST00000426840 NEUROD1Q13562 356 aa10.77□□□□□ -0.69
LINC01049-201ENST00000426840 SLC26A8Q96RN1 970 aa10.77□□□□□ -0.69
LINC01049-201ENST00000426840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC01049-201ENST00000426840 TBX22Q9Y458 520 aa10.77□□□□□ -0.69
LINC01049-201ENST00000426840 ADGRF5Q8IZF2 1346 aa10.77□□□□□ -0.69
LINC01049-201ENST00000426840 DCAF11Q8TEB1 546 aa10.75□□□□□ -0.69
LINC01049-201ENST00000426840 BCANQ96GW7 911 aa10.75□□□□□ -0.69
LINC01049-201ENST00000426840 PPLO60437 1756 aa10.75□□□□□ -0.69
LINC01049-201ENST00000426840 ADAMTS13Q76LX8 1427 aa10.75□□□□□ -0.69
LINC01049-201ENST00000426840 IQGAP1P46940 1657 aa10.74□□□□□ -0.69
LINC01049-201ENST00000426840 STAC3Q96MF2 364 aa10.74□□□□□ -0.69
LINC01049-201ENST00000426840 OCEL1Q9H607 264 aa10.74□□□□□ -0.69
LINC01049-201ENST00000426840 KDM2AQ9Y2K7 1162 aa10.74□□□□□ -0.69
LINC01049-201ENST00000426840 ZNF335Q9H4Z2 1342 aaPredicted RBP10.74□□□□□ -0.69
LINC01049-201ENST00000426840 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
LINC01049-201ENST00000426840 L3MBTL2Q969R5 705 aa10.73□□□□□ -0.69
LINC01049-201ENST00000426840 IFT172Q9UG01 1749 aa10.72□□□□□ -0.69
LINC01049-201ENST00000426840 KCNA6P17658 529 aa10.72□□□□□ -0.69
LINC01049-201ENST00000426840 HS6ST3Q8IZP7 471 aa10.72□□□□□ -0.69
LINC01049-201ENST00000426840 CLSPNQ9HAW4 1339 aa10.72□□□□□ -0.69
LINC01049-201ENST00000426840 CCER1Q8TC90 406 aaPredicted RBP10.71□□□□□ -0.69
LINC01049-201ENST00000426840 C14orf93Q9H972 538 aaKnown RBP10.71□□□□□ -0.69
LINC01049-201ENST00000426840 PHF8Q9UPP1 1060 aa10.71□□□□□ -0.69
LINC01049-201ENST00000426840 NRXN3Q9Y4C0 1643 aa10.71□□□□□ -0.69
LINC01049-201ENST00000426840 SETBP1Q9Y6X0 1596 aa10.71□□□□□ -0.69
LINC01049-201ENST00000426840 LTBP4Q8N2S1 1624 aa10.7□□□□□ -0.7
LINC01049-201ENST00000426840 NRXN1Q9ULB1 1477 aa10.7□□□□□ -0.7
LINC01049-201ENST00000426840 METP08581 1390 aa10.7□□□□□ -0.7
LINC01049-201ENST00000426840 POTEJP0CG39 1038 aa10.7□□□□□ -0.7
LINC01049-201ENST00000426840 PDCD7Q8N8D1 485 aaKnown RBP10.7□□□□□ -0.7
LINC01049-201ENST00000426840 MYOM2P54296 1465 aa10.69□□□□□ -0.7
LINC01049-201ENST00000426840 PTPRUQ92729 1446 aa10.69□□□□□ -0.7
LINC01049-201ENST00000426840 PIK3R4Q99570 1358 aa10.69□□□□□ -0.7
LINC01049-201ENST00000426840 CFAP70Q5T0N1 1121 aa10.69□□□□□ -0.7
LINC01049-201ENST00000426840 DPY19L2Q6NUT2 758 aa10.69□□□□□ -0.7
LINC01049-201ENST00000426840 ALKQ9UM73 1620 aa10.69□□□□□ -0.7
LINC01049-201ENST00000426840 PIK3C2GO75747 1445 aa10.68□□□□□ -0.7
LINC01049-201ENST00000426840 STRCP1A6NGW2 1772 aa10.68□□□□□ -0.7
LINC01049-201ENST00000426840 SOX12O15370 315 aa10.68□□□□□ -0.7
LINC01049-201ENST00000426840 AMOTL2Q9Y2J4 779 aa10.68□□□□□ -0.7
LINC01049-201ENST00000426840 TMEM132EQ6IEE7 984 aa10.67□□□□□ -0.7
LINC01049-201ENST00000426840 CERKQ8TCT0 537 aa10.67□□□□□ -0.7
LINC01049-201ENST00000426840 DIP2AQ14689 1571 aa10.67□□□□□ -0.7
LINC01049-201ENST00000426840 CHD2O14647 1828 aaKnown RBP10.67□□□□□ -0.7
LINC01049-201ENST00000426840 TIMELESSQ9UNS1 1208 aa10.66□□□□□ -0.7
LINC01049-201ENST00000426840 SETD1AO15047 1707 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms