RNA–Protein interactions for RNA: ENST00000426681.2

PDGFA-205, Transcript of platelet derived growth factor subunit A, human

TSL 5

Gene PDGFA, Length 357 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDGFA-205	ENST00000426681	MST1R	Q04912	1400 aa		33.71	■■■□□ 2.99
PDGFA-205	ENST00000426681	HSPA1L	P34931	641 aa		33.71	■■■□□ 2.99
PDGFA-205	ENST00000426681	PRAM1	Q96QH2	718 aa		33.71	■■■□□ 2.99
PDGFA-205	ENST00000426681	CDC42BPG	Q6DT37	1551 aa		33.69	■■■□□ 2.98
PDGFA-205	ENST00000426681	TRPM1	Q7Z4N2	1603 aa		33.68	■■■□□ 2.98
PDGFA-205	ENST00000426681	POGK	Q9P215	609 aa		33.67	■■■□□ 2.98
PDGFA-205	ENST00000426681	NBPF8	Q3BBV2	869 aa		33.65	■■■□□ 2.98
PDGFA-205	ENST00000426681	CCER1	Q8TC90	406 aa	Predicted RBP	33.64	■■■□□ 2.98
PDGFA-205	ENST00000426681	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.64	■■■□□ 2.98
PDGFA-205	ENST00000426681	TIMELESS	Q9UNS1	1208 aa		33.62	■■■□□ 2.97
PDGFA-205	ENST00000426681	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.61	■■■□□ 2.97
PDGFA-205	ENST00000426681	BRINP3	Q76B58	766 aa		33.61	■■■□□ 2.97
PDGFA-205	ENST00000426681	C1orf167	Q5SNV9	1468 aa		33.61	■■■□□ 2.97
PDGFA-205	ENST00000426681	ADGRB2	O60241	1585 aa		33.57	■■■□□ 2.96
PDGFA-205	ENST00000426681	ROCK2	O75116	1388 aa	Known RBP	33.57	■■■□□ 2.96
PDGFA-205	ENST00000426681	FMN2	Q9NZ56	1722 aa		33.56	■■■□□ 2.96
PDGFA-205	ENST00000426681	GPRASP1	Q5JY77	1395 aa		33.55	■■■□□ 2.96
PDGFA-205	ENST00000426681	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.53	■■■□□ 2.96
PDGFA-205	ENST00000426681	RALGAPB	Q86X10	1494 aa		33.52	■■■□□ 2.96
PDGFA-205	ENST00000426681	PHLPP1	O60346	1717 aa		33.51	■■■□□ 2.96
PDGFA-205	ENST00000426681	MINK1	Q8N4C8	1332 aa	Predicted RBP	33.51	■■■□□ 2.95
PDGFA-205	ENST00000426681	ORAI2	Q96SN7	254 aa		33.5	■■■□□ 2.95
PDGFA-205	ENST00000426681	NHSL1	Q5SYE7	1610 aa		33.47	■■■□□ 2.95
PDGFA-205	ENST00000426681	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.47	■■■□□ 2.95
PDGFA-205	ENST00000426681	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.46	■■■□□ 2.95
PDGFA-205	ENST00000426681	COL16A1	Q07092	1604 aa	Predicted RBP	33.46	■■■□□ 2.95
PDGFA-205	ENST00000426681	NUTM2F	A1L443	756 aa		33.45	■■■□□ 2.95
PDGFA-205	ENST00000426681	WASL	O00401	505 aa	Predicted RBP	33.45	■■■□□ 2.95
PDGFA-205	ENST00000426681	ESCO1	Q5FWF5	840 aa		33.45	■■■□□ 2.95
PDGFA-205	ENST00000426681	ANKAR	Q7Z5J8	1434 aa		33.44	■■■□□ 2.94
PDGFA-205	ENST00000426681	EIF3A	Q14152	1382 aa	Known RBP	33.43	■■■□□ 2.94
PDGFA-205	ENST00000426681	CARD11	Q9BXL7	1154 aa		33.42	■■■□□ 2.94
PDGFA-205	ENST00000426681	RGPD8	O14715	1765 aa	Predicted RBP	33.4	■■■□□ 2.94
PDGFA-205	ENST00000426681	QRICH2	Q9H0J4	1663 aa		33.39	■■■□□ 2.94
PDGFA-205	ENST00000426681	USP32	Q8NFA0	1604 aa		33.39	■■■□□ 2.93
PDGFA-205	ENST00000426681	TULP4	Q9NRJ4	1543 aa		33.38	■■■□□ 2.93
PDGFA-205	ENST00000426681	DDX17	Q92841	729 aa	Known RBP	33.37	■■■□□ 2.93
PDGFA-205	ENST00000426681	KIF1A	Q12756	1690 aa		33.36	■■■□□ 2.93
PDGFA-205	ENST00000426681	JCAD	Q9P266	1359 aa		33.34	■■■□□ 2.93
PDGFA-205	ENST00000426681	SOS2	Q07890	1332 aa	Predicted RBP	33.34	■■■□□ 2.93
PDGFA-205	ENST00000426681	CDK19	Q9BWU1	502 aa		33.34	■■■□□ 2.93
PDGFA-205	ENST00000426681	NPHP3	Q7Z494	1330 aa		33.33	■■■□□ 2.93
PDGFA-205	ENST00000426681	PRR36	Q9H6K5	1346 aa		33.33	■■■□□ 2.93
PDGFA-205	ENST00000426681	PHF8	Q9UPP1	1060 aa		33.33	■■■□□ 2.93
PDGFA-205	ENST00000426681	FOXO3	O43524	673 aa		33.31	■■■□□ 2.92
PDGFA-205	ENST00000426681	LRRC59	Q96AG4	307 aa	Known RBP	33.31	■■■□□ 2.92
PDGFA-205	ENST00000426681	NUDT16	Q96DE0	195 aa	Known RBP	33.28	■■■□□ 2.92
PDGFA-205	ENST00000426681	ATP7B	P35670	1465 aa		33.28	■■■□□ 2.92
PDGFA-205	ENST00000426681	PXDN	Q92626	1479 aa		33.28	■■■□□ 2.92
PDGFA-205	ENST00000426681	SHPRH	Q149N8	1683 aa		33.27	■■■□□ 2.92
PDGFA-205	ENST00000426681	SBNO2	Q9Y2G9	1366 aa		33.27	■■■□□ 2.92
PDGFA-205	ENST00000426681	ITSN1	Q15811	1721 aa		33.24	■■■□□ 2.91
PDGFA-205	ENST00000426681	EVC2	Q86UK5	1308 aa		33.24	■■■□□ 2.91
PDGFA-205	ENST00000426681	MED1	Q15648	1581 aa	Predicted RBP	33.22	■■■□□ 2.91
PDGFA-205	ENST00000426681	CCDC61	Q9Y6R9	512 aa		33.22	■■■□□ 2.91
PDGFA-205	ENST00000426681	SRPK2	P78362	688 aa	Known RBP	33.21	■■■□□ 2.91
PDGFA-205	ENST00000426681	PMFBP1	Q8TBY8	1022 aa		33.21	■■■□□ 2.91
PDGFA-205	ENST00000426681	SPATA31A6	Q5VVP1	1343 aa		33.21	■■■□□ 2.91
PDGFA-205	ENST00000426681	TOPAZ1	Q8N9V7	1692 aa		33.2	■■■□□ 2.9
PDGFA-205	ENST00000426681	XPC	Q01831	940 aa	Predicted RBP	33.19	■■■□□ 2.9
PDGFA-205	ENST00000426681	KRT28	Q7Z3Y7	464 aa		33.19	■■■□□ 2.9
PDGFA-205	ENST00000426681	CABP2	Q9NPB3	220 aa		33.19	■■■□□ 2.9
PDGFA-205	ENST00000426681	PNPLA6	Q8IY17	1366 aa		33.19	■■■□□ 2.9
PDGFA-205	ENST00000426681	PLEKHG3	A1L390	1219 aa		33.16	■■■□□ 2.9
PDGFA-205	ENST00000426681	PSME1	Q06323	249 aa		33.16	■■■□□ 2.9
PDGFA-205	ENST00000426681	ST20-MTHFS	A0A0A6YYL1	179 aa		33.15	■■■□□ 2.9
PDGFA-205	ENST00000426681	USP47	Q96K76	1375 aa		33.15	■■■□□ 2.9
PDGFA-205	ENST00000426681	NGDN	Q8NEJ9	315 aa	Known RBP	33.13	■■■□□ 2.89
PDGFA-205	ENST00000426681	TESK2	Q96S53	571 aa		33.13	■■■□□ 2.89
PDGFA-205	ENST00000426681	SBNO1	A3KN83	1393 aa		33.12	■■■□□ 2.89
PDGFA-205	ENST00000426681	POLR3A	O14802	1390 aa	Predicted RBP	33.12	■■■□□ 2.89
PDGFA-205	ENST00000426681	SPATA31A3	Q5VYP0	1347 aa		33.12	■■■□□ 2.89
PDGFA-205	ENST00000426681	SLC24A1	O60721	1099 aa		33.11	■■■□□ 2.89
PDGFA-205	ENST00000426681	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.1	■■■□□ 2.89
PDGFA-205	ENST00000426681	PPIP5K1	Q6PFW1	1433 aa		33.1	■■■□□ 2.89
PDGFA-205	ENST00000426681	DISP3	Q9P2K9	1392 aa		33.09	■■■□□ 2.89
PDGFA-205	ENST00000426681	ACE	P12821	1306 aa		33.07	■■■□□ 2.88
PDGFA-205	ENST00000426681	LRP6	O75581	1613 aa		33.07	■■■□□ 2.88
PDGFA-205	ENST00000426681	TNS3	Q68CZ2	1445 aa		33.07	■■■□□ 2.88
PDGFA-205	ENST00000426681	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.07	■■■□□ 2.88
PDGFA-205	ENST00000426681	PUS7	Q96PZ0	661 aa	Known RBP	33.06	■■■□□ 2.88
PDGFA-205	ENST00000426681	ATAD2	Q6PL18	1390 aa		33.06	■■■□□ 2.88
PDGFA-205	ENST00000426681	CABP1	Q9NZU7	370 aa		33.05	■■■□□ 2.88
PDGFA-205	ENST00000426681	NUTM2B	A6NNL0	878 aa	Predicted RBP	33.03	■■■□□ 2.88
PDGFA-205	ENST00000426681	NUTM2E	B1AL46	878 aa	Predicted RBP	33.03	■■■□□ 2.88
PDGFA-205	ENST00000426681	NUTM2A	Q8IVF1	878 aa	Predicted RBP	33.03	■■■□□ 2.88
PDGFA-205	ENST00000426681	ARHGEF10	O15013	1369 aa		33.01	■■■□□ 2.88
PDGFA-205	ENST00000426681	ALS2	Q96Q42	1657 aa		32.98	■■■□□ 2.87
PDGFA-205	ENST00000426681	PHF23	Q9BUL5	403 aa	Predicted RBP	32.98	■■■□□ 2.87
PDGFA-205	ENST00000426681	MEX3C	Q5U5Q3	659 aa	Known RBP	32.96	■■■□□ 2.87
PDGFA-205	ENST00000426681	BRD4	O60885	1362 aa	Predicted RBP	32.96	■■■□□ 2.87
PDGFA-205	ENST00000426681	TMF1	P82094	1093 aa		32.95	■■■□□ 2.87
PDGFA-205	ENST00000426681	LMOD2	Q6P5Q4	547 aa		32.94	■■■□□ 2.86
PDGFA-205	ENST00000426681	PAK3	O75914	559 aa	Predicted RBP	32.93	■■■□□ 2.86
PDGFA-205	ENST00000426681	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.93	■■■□□ 2.86
PDGFA-205	ENST00000426681	ZNF692	Q9BU19	519 aa	Predicted RBP	32.92	■■■□□ 2.86
PDGFA-205	ENST00000426681	RGS17	Q9UGC6	210 aa	Predicted RBP	32.91	■■■□□ 2.86
PDGFA-205	ENST00000426681	USP6	P35125	1406 aa		32.91	■■■□□ 2.86
PDGFA-205	ENST00000426681	CPSF1	Q10570	1443 aa	Known RBP	32.91	■■■□□ 2.86
PDGFA-205	ENST00000426681	AKAP12	Q02952	1782 aa		32.9	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms