RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
CTCFL-206ENST00000426658 PIK3C2GO75747 1445 aa12.86□□□□□ -0.35
CTCFL-206ENST00000426658 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
CTCFL-206ENST00000426658 MAGI2Q86UL8 1455 aa12.85□□□□□ -0.35
CTCFL-206ENST00000426658 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
CTCFL-206ENST00000426658 PANK2Q9BZ23 570 aa12.85□□□□□ -0.35
CTCFL-206ENST00000426658 SYNJ2O15056 1496 aa12.85□□□□□ -0.35
CTCFL-206ENST00000426658 ATP10BO94823 1461 aa12.85□□□□□ -0.35
CTCFL-206ENST00000426658 E9PCH4 1651 aa12.85□□□□□ -0.35
CTCFL-206ENST00000426658 MTHFSP49914 203 aa12.84□□□□□ -0.35
CTCFL-206ENST00000426658 DZIP1LQ8IYY4 767 aaKnown RBP12.84□□□□□ -0.35
CTCFL-206ENST00000426658 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
CTCFL-206ENST00000426658 EIF2AK4Q9P2K8 1649 aaKnown RBP12.83□□□□□ -0.36
CTCFL-206ENST00000426658 ARHGAP5Q13017 1502 aa12.83□□□□□ -0.36
CTCFL-206ENST00000426658 TSR2Q969E8 191 aaKnown RBP12.83□□□□□ -0.36
CTCFL-206ENST00000426658 TRPM1Q7Z4N2 1603 aa12.83□□□□□ -0.36
CTCFL-206ENST00000426658 EIF4G3O43432 1585 aaKnown RBP12.83□□□□□ -0.36
CTCFL-206ENST00000426658 GRPEL1Q9HAV7 217 aa12.83□□□□□ -0.36
CTCFL-206ENST00000426658 CROCC2H7BZ55 1655 aa12.82□□□□□ -0.36
CTCFL-206ENST00000426658 PRDM15P57071 1507 aaPredicted RBP12.82□□□□□ -0.36
CTCFL-206ENST00000426658 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
CTCFL-206ENST00000426658 SCAF11Q99590 1463 aaKnown RBP12.81□□□□□ -0.36
CTCFL-206ENST00000426658 CLCN1P35523 988 aa12.81□□□□□ -0.36
CTCFL-206ENST00000426658 MVPQ14764 893 aaKnown RBP12.81□□□□□ -0.36
CTCFL-206ENST00000426658 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.81□□□□□ -0.36
CTCFL-206ENST00000426658 RLBP1P12271 317 aa12.81□□□□□ -0.36
CTCFL-206ENST00000426658 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
CTCFL-206ENST00000426658 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
CTCFL-206ENST00000426658 ANTXR1Q9H6X2 564 aa12.81□□□□□ -0.36
CTCFL-206ENST00000426658 GGNBP2Q9H3C7 697 aa12.8□□□□□ -0.36
CTCFL-206ENST00000426658 ABCC10Q5T3U5 1492 aa12.8□□□□□ -0.36
CTCFL-206ENST00000426658 WDR7Q9Y4E6 1490 aa12.8□□□□□ -0.36
CTCFL-206ENST00000426658 ESPNB1AK53 854 aa12.8□□□□□ -0.36
CTCFL-206ENST00000426658 PLA2R1Q13018 1463 aa12.8□□□□□ -0.36
CTCFL-206ENST00000426658 SCAPERQ9BY12 1400 aa12.8□□□□□ -0.36
CTCFL-206ENST00000426658 PTMSP20962 102 aa12.79□□□□□ -0.36
CTCFL-206ENST00000426658 PKNOX2Q96KN3 472 aa12.79□□□□□ -0.36
CTCFL-206ENST00000426658 DDX19BQ9UMR2 479 aa12.79□□□□□ -0.36
CTCFL-206ENST00000426658 CABP2Q9NPB3 220 aa12.79□□□□□ -0.36
CTCFL-206ENST00000426658 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
CTCFL-206ENST00000426658 IPO8O15397 1037 aaKnown RBP12.78□□□□□ -0.36
CTCFL-206ENST00000426658 MSNP26038 577 aaKnown RBP12.78□□□□□ -0.36
CTCFL-206ENST00000426658 ISY1Q9ULR0 285 aaKnown RBP12.78□□□□□ -0.36
CTCFL-206ENST00000426658 MINK1Q8N4C8 1332 aaPredicted RBP12.78□□□□□ -0.36
CTCFL-206ENST00000426658 NPC1L1Q9UHC9 1359 aa12.78□□□□□ -0.36
CTCFL-206ENST00000426658 RRP9O43818 475 aaKnown RBP12.78□□□□□ -0.36
CTCFL-206ENST00000426658 ANKRD45Q5TZF3 282 aa12.78□□□□□ -0.36
CTCFL-206ENST00000426658 RAPGEF3O95398 923 aa12.77□□□□□ -0.37
CTCFL-206ENST00000426658 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
CTCFL-206ENST00000426658 ARID3AQ99856 593 aa12.76□□□□□ -0.37
CTCFL-206ENST00000426658 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
CTCFL-206ENST00000426658 SYCP2Q9BX26 1530 aa12.76□□□□□ -0.37
CTCFL-206ENST00000426658 EXOSC9Q06265 439 aaKnown RBP12.76□□□□□ -0.37
CTCFL-206ENST00000426658 FOXD4L5Q5VV16 416 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-206ENST00000426658 FOXD4L4Q8WXT5 416 aaPredicted RBP12.76□□□□□ -0.37
CTCFL-206ENST00000426658 ARHGEF5Q12774 1597 aa12.75□□□□□ -0.37
CTCFL-206ENST00000426658 FSD2A1L4K1 749 aa12.75□□□□□ -0.37
CTCFL-206ENST00000426658 RIPK4P57078 832 aa12.75□□□□□ -0.37
CTCFL-206ENST00000426658 ABCC2Q92887 1545 aa12.75□□□□□ -0.37
CTCFL-206ENST00000426658 CDC42BPAQ5VT25 1732 aa12.75□□□□□ -0.37
CTCFL-206ENST00000426658 C1orf115Q9H7X2 142 aa12.74□□□□□ -0.37
CTCFL-206ENST00000426658 DDX49Q9Y6V7 483 aaKnown RBP12.74□□□□□ -0.37
CTCFL-206ENST00000426658 POLR3AO14802 1390 aaPredicted RBP12.74□□□□□ -0.37
CTCFL-206ENST00000426658 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
CTCFL-206ENST00000426658 HMOX1P09601 288 aa12.73□□□□□ -0.37
CTCFL-206ENST00000426658 NOL8Q76FK4 1167 aaKnown RBP12.73□□□□□ -0.37
CTCFL-206ENST00000426658 TNPO1Q92973 898 aaKnown RBP12.73□□□□□ -0.37
CTCFL-206ENST00000426658 ADGRF5Q8IZF2 1346 aa12.73□□□□□ -0.37
CTCFL-206ENST00000426658 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
CTCFL-206ENST00000426658 CIZ1Q9ULV3 898 aaPredicted RBP12.72□□□□□ -0.37
CTCFL-206ENST00000426658 CLASP1Q7Z460 1538 aa12.72□□□□□ -0.37
CTCFL-206ENST00000426658 ATF7IPQ6VMQ6 1270 aa12.71□□□□□ -0.37
CTCFL-206ENST00000426658 NOB1Q9ULX3 412 aaKnown RBP12.71□□□□□ -0.37
CTCFL-206ENST00000426658 NASPP49321 788 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-206ENST00000426658 HDGFL2Q7Z4V5 671 aaPredicted RBP12.71□□□□□ -0.37
CTCFL-206ENST00000426658 TPM2P07951 284 aa12.71□□□□□ -0.38
CTCFL-206ENST00000426658 SYNMO15061 1565 aa12.7□□□□□ -0.38
CTCFL-206ENST00000426658 FOXD4L6Q3SYB3 417 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-206ENST00000426658 FOXD4L3Q6VB84 417 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-206ENST00000426658 ZMYM3Q14202 1370 aa12.7□□□□□ -0.38
CTCFL-206ENST00000426658 CT47B1P0C2W7 299 aaPredicted RBP12.7□□□□□ -0.38
CTCFL-206ENST00000426658 TRIM27P14373 513 aa12.7□□□□□ -0.38
CTCFL-206ENST00000426658 PLCB2Q00722 1185 aa12.7□□□□□ -0.38
CTCFL-206ENST00000426658 CALD1Q05682 793 aaKnown RBP12.7□□□□□ -0.38
CTCFL-206ENST00000426658 DUOX2Q9NRD8 1548 aa12.7□□□□□ -0.38
CTCFL-206ENST00000426658 LAMC1P11047 1609 aa12.7□□□□□ -0.38
CTCFL-206ENST00000426658 ZMYND15Q9H091 742 aa12.7□□□□□ -0.38
CTCFL-206ENST00000426658 EVC2Q86UK5 1308 aa12.69□□□□□ -0.38
CTCFL-206ENST00000426658 PTMAP06454 111 aaKnown RBP12.69□□□□□ -0.38
CTCFL-206ENST00000426658 SSH1Q8WYL5 1049 aa12.69□□□□□ -0.38
CTCFL-206ENST00000426658 SAMD9LQ8IVG5 1584 aa12.69□□□□□ -0.38
CTCFL-206ENST00000426658 HDAC1Q13547 482 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-206ENST00000426658 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
CTCFL-206ENST00000426658 CCDC173Q0VFZ6 552 aa12.69□□□□□ -0.38
CTCFL-206ENST00000426658 KIF16BQ96L93 1317 aa12.69□□□□□ -0.38
CTCFL-206ENST00000426658 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
CTCFL-206ENST00000426658 SLC4A10Q6U841 1118 aa12.68□□□□□ -0.38
CTCFL-206ENST00000426658 CCDC27Q2M243 656 aa12.67□□□□□ -0.38
CTCFL-206ENST00000426658 KIAA1211Q6ZU35 1233 aa12.67□□□□□ -0.38
CTCFL-206ENST00000426658 CHD1LQ86WJ1 897 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms