RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 LAMC1P11047 1609 aa29.67■■■□□ 2.34
CCDC107-206ENST00000426546 KNDC1Q76NI1 1749 aa29.65■■■□□ 2.34
CCDC107-206ENST00000426546 TECPR2O15040 1411 aa29.65■■■□□ 2.34
CCDC107-206ENST00000426546 QTRT2Q9H974 415 aaKnown RBP29.64■■■□□ 2.34
CCDC107-206ENST00000426546 CDC42BPGQ6DT37 1551 aa29.64■■■□□ 2.33
CCDC107-206ENST00000426546 RGS12O14924 1447 aa29.63■■■□□ 2.33
CCDC107-206ENST00000426546 RBM6P78332 1123 aaKnown RBP29.62■■■□□ 2.33
CCDC107-206ENST00000426546 ORAI2Q96SN7 254 aa29.62■■■□□ 2.33
CCDC107-206ENST00000426546 LRPPRCP42704 1394 aaKnown RBP29.62■■■□□ 2.33
CCDC107-206ENST00000426546 SOS2Q07890 1332 aaPredicted RBP29.61■■■□□ 2.33
CCDC107-206ENST00000426546 MYOM2P54296 1465 aa29.61■■■□□ 2.33
CCDC107-206ENST00000426546 NRXN1Q9ULB1 1477 aa29.6■■■□□ 2.33
CCDC107-206ENST00000426546 ADAMTS2O95450 1211 aa29.59■■■□□ 2.33
CCDC107-206ENST00000426546 ABCC11Q96J66 1382 aa29.59■■■□□ 2.33
CCDC107-206ENST00000426546 NGLY1Q96IV0 654 aa29.57■■■□□ 2.32
CCDC107-206ENST00000426546 STK26Q9P289 416 aa29.55■■■□□ 2.32
CCDC107-206ENST00000426546 YTHDC2Q9H6S0 1430 aaKnown RBP29.54■■■□□ 2.32
CCDC107-206ENST00000426546 HRCP23327 699 aa29.53■■■□□ 2.32
CCDC107-206ENST00000426546 TMEM132EQ6IEE7 984 aa29.53■■■□□ 2.32
CCDC107-206ENST00000426546 C14orf93Q9H972 538 aaKnown RBP29.51■■■□□ 2.31
CCDC107-206ENST00000426546 COL22A1Q8NFW1 1626 aaPredicted RBP29.49■■■□□ 2.31
CCDC107-206ENST00000426546 WAPLQ7Z5K2 1190 aa29.49■■■□□ 2.31
CCDC107-206ENST00000426546 USP21Q9UK80 565 aa29.48■■■□□ 2.31
CCDC107-206ENST00000426546 FMN2Q9NZ56 1722 aa29.47■■■□□ 2.31
CCDC107-206ENST00000426546 PLEKHH1Q9ULM0 1364 aa29.47■■■□□ 2.31
CCDC107-206ENST00000426546 FNBP4Q8N3X1 1017 aaPredicted RBP29.46■■■□□ 2.31
CCDC107-206ENST00000426546 SIRT1Q96EB6 747 aa29.46■■■□□ 2.31
CCDC107-206ENST00000426546 DHX57Q6P158 1386 aaKnown RBP29.45■■■□□ 2.31
CCDC107-206ENST00000426546 CFAP70Q5T0N1 1121 aa29.44■■■□□ 2.3
CCDC107-206ENST00000426546 TRPC5Q9UL62 973 aaPredicted RBP29.44■■■□□ 2.3
CCDC107-206ENST00000426546 NPHP3Q7Z494 1330 aa29.44■■■□□ 2.3
CCDC107-206ENST00000426546 ESCO1Q5FWF5 840 aa29.43■■■□□ 2.3
CCDC107-206ENST00000426546 PXDNQ92626 1479 aa29.42■■■□□ 2.3
CCDC107-206ENST00000426546 ATRNO75882 1429 aa29.42■■■□□ 2.3
CCDC107-206ENST00000426546 ATAD2Q6PL18 1390 aa29.4■■■□□ 2.3
CCDC107-206ENST00000426546 KIF1AQ12756 1690 aa29.4■■■□□ 2.3
CCDC107-206ENST00000426546 DLC1Q96QB1 1528 aa29.4■■■□□ 2.3
CCDC107-206ENST00000426546 ADGRB1O14514 1584 aa29.38■■■□□ 2.29
CCDC107-206ENST00000426546 FOXO3O43524 673 aa29.37■■■□□ 2.29
CCDC107-206ENST00000426546 XPCQ01831 940 aaPredicted RBP29.36■■■□□ 2.29
CCDC107-206ENST00000426546 STAC3Q96MF2 364 aa29.36■■■□□ 2.29
CCDC107-206ENST00000426546 MARF1Q9Y4F3 1742 aaKnown RBP29.36■■■□□ 2.29
CCDC107-206ENST00000426546 NUTM2FA1L443 756 aa29.35■■■□□ 2.29
CCDC107-206ENST00000426546 BCL9LQ86UU0 1499 aa29.35■■■□□ 2.29
CCDC107-206ENST00000426546 RGPD8O14715 1765 aaPredicted RBP29.32■■■□□ 2.28
CCDC107-206ENST00000426546 DCAF11Q8TEB1 546 aa29.32■■■□□ 2.28
CCDC107-206ENST00000426546 PRAM1Q96QH2 718 aa29.32■■■□□ 2.28
CCDC107-206ENST00000426546 ADGRB2O60241 1585 aa29.31■■■□□ 2.28
CCDC107-206ENST00000426546 KDM2AQ9Y2K7 1162 aa29.28■■■□□ 2.28
CCDC107-206ENST00000426546 EP400Q96L91 3159 aa29.27■■■□□ 2.28
CCDC107-206ENST00000426546 POGKQ9P215 609 aa29.26■■■□□ 2.27
CCDC107-206ENST00000426546 SAFB2Q14151 953 aaKnown RBP eCLIP29.25■■■□□ 2.27
CCDC107-206ENST00000426546 GJD4Q96KN9 370 aaPredicted RBP29.25■■■□□ 2.27
CCDC107-206ENST00000426546 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.24■■■□□ 2.27
CCDC107-206ENST00000426546 SPATA31A3Q5VYP0 1347 aa29.23■■■□□ 2.27
CCDC107-206ENST00000426546 SRCAPQ6ZRS2 3230 aa29.23■■■□□ 2.27
CCDC107-206ENST00000426546 ANKARQ7Z5J8 1434 aa29.23■■■□□ 2.27
CCDC107-206ENST00000426546 TRAK1Q9UPV9 953 aa29.23■■■□□ 2.27
CCDC107-206ENST00000426546 USP32Q8NFA0 1604 aa29.23■■■□□ 2.27
CCDC107-206ENST00000426546 PHF8Q9UPP1 1060 aa29.22■■■□□ 2.27
CCDC107-206ENST00000426546 SLIT2O94813 1529 aa29.2■■■□□ 2.27
CCDC107-206ENST00000426546 KRT28Q7Z3Y7 464 aa29.19■■■□□ 2.26
CCDC107-206ENST00000426546 ARHGEF28Q8N1W1 1705 aaKnown RBP29.19■■■□□ 2.26
CCDC107-206ENST00000426546 CCDC125Q86Z20 511 aa29.18■■■□□ 2.26
CCDC107-206ENST00000426546 UNC5CLQ8IV45 518 aa29.18■■■□□ 2.26
CCDC107-206ENST00000426546 GLI3P10071 1580 aa29.18■■■□□ 2.26
CCDC107-206ENST00000426546 KIAA1210Q9ULL0 1709 aa29.17■■■□□ 2.26
CCDC107-206ENST00000426546 EIF3AQ14152 1382 aaKnown RBP29.17■■■□□ 2.26
CCDC107-206ENST00000426546 RALGAPBQ86X10 1494 aa29.17■■■□□ 2.26
CCDC107-206ENST00000426546 TNS3Q68CZ2 1445 aa29.16■■■□□ 2.26
CCDC107-206ENST00000426546 PSME1Q06323 249 aa29.15■■■□□ 2.26
CCDC107-206ENST00000426546 ZRANB1Q9UGI0 708 aa29.15■■■□□ 2.26
CCDC107-206ENST00000426546 TULP4Q9NRJ4 1543 aa29.15■■■□□ 2.26
CCDC107-206ENST00000426546 SBNO1A3KN83 1393 aa29.13■■■□□ 2.25
CCDC107-206ENST00000426546 MINK1Q8N4C8 1332 aaPredicted RBP29.13■■■□□ 2.25
CCDC107-206ENST00000426546 HIRIP3Q9BW71 556 aaPredicted RBP29.12■■■□□ 2.25
CCDC107-206ENST00000426546 ABCA3Q99758 1704 aa29.09■■■□□ 2.25
CCDC107-206ENST00000426546 ARHGEF10O15013 1369 aa29.09■■■□□ 2.25
CCDC107-206ENST00000426546 TRPM3Q9HCF6 1732 aaPredicted RBP29.08■■■□□ 2.25
CCDC107-206ENST00000426546 WASLO00401 505 aaPredicted RBP29.08■■■□□ 2.25
CCDC107-206ENST00000426546 CABLES1Q8TDN4 633 aa29.08■■■□□ 2.25
CCDC107-206ENST00000426546 BRWD3Q6RI45 1802 aa29.08■■■□□ 2.25
CCDC107-206ENST00000426546 ITSN1Q15811 1721 aa29.07■■■□□ 2.24
CCDC107-206ENST00000426546 PMFBP1Q8TBY8 1022 aa29.07■■■□□ 2.24
CCDC107-206ENST00000426546 PRR36Q9H6K5 1346 aa29.06■■■□□ 2.24
CCDC107-206ENST00000426546 HAP1P54257 671 aaPredicted RBP29.06■■■□□ 2.24
CCDC107-206ENST00000426546 BLMP54132 1417 aaPredicted RBP29.05■■■□□ 2.24
CCDC107-206ENST00000426546 PLCH1Q4KWH8 1693 aa29.05■■■□□ 2.24
CCDC107-206ENST00000426546 VPS72Q15906 364 aa29.04■■■□□ 2.24
CCDC107-206ENST00000426546 NWD2Q9ULI1 1742 aa29.03■■■□□ 2.24
CCDC107-206ENST00000426546 ALS2Q96Q42 1657 aa29.03■■■□□ 2.24
CCDC107-206ENST00000426546 GPRASP1Q5JY77 1395 aa29.02■■■□□ 2.24
CCDC107-206ENST00000426546 PLEKHG5O94827 1062 aa29.02■■■□□ 2.24
CCDC107-206ENST00000426546 SEPT12Q8IYM1 358 aa29.02■■■□□ 2.24
CCDC107-206ENST00000426546 ATP7BP35670 1465 aa29.01■■■□□ 2.23
CCDC107-206ENST00000426546 LMOD2Q6P5Q4 547 aa28.99■■■□□ 2.23
CCDC107-206ENST00000426546 ONECUT3O60422 494 aaPredicted RBP28.98■■■□□ 2.23
CCDC107-206ENST00000426546 DEFB132Q7Z7B7 95 aa28.97■■■□□ 2.23
CCDC107-206ENST00000426546 TOPAZ1Q8N9V7 1692 aa28.96■■■□□ 2.23
CCDC107-206ENST00000426546 FAM83GA6ND36 823 aa28.95■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms