RNA–Protein interactions for RNA: ENST00000425346.5

CYB561D2-205, Transcript of cytochrome b561 family member D2, human

APPRIS P1 TSL 1 (best) BASIC

Gene CYB561D2, Length 1,319 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561D2-205	ENST00000425346	ADAMTS2	O95450	1211 aa		31.82	■■■□□ 2.68
CYB561D2-205	ENST00000425346	QTRT2	Q9H974	415 aa	Known RBP	31.8	■■■□□ 2.68
CYB561D2-205	ENST00000425346	PLEKHH1	Q9ULM0	1364 aa		31.79	■■■□□ 2.68
CYB561D2-205	ENST00000425346	IFT172	Q9UG01	1749 aa		31.79	■■■□□ 2.68
CYB561D2-205	ENST00000425346	ANKRD30B	Q9BXX2	1392 aa		31.78	■■■□□ 2.68
CYB561D2-205	ENST00000425346	ESCO1	Q5FWF5	840 aa		31.77	■■■□□ 2.68
CYB561D2-205	ENST00000425346	LRPPRC	P42704	1394 aa	Known RBP	31.77	■■■□□ 2.68
CYB561D2-205	ENST00000425346	TECPR2	O15040	1411 aa		31.76	■■■□□ 2.68
CYB561D2-205	ENST00000425346	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.76	■■■□□ 2.67
CYB561D2-205	ENST00000425346	NUTM2F	A1L443	756 aa		31.75	■■■□□ 2.67
CYB561D2-205	ENST00000425346	NGLY1	Q96IV0	654 aa		31.75	■■■□□ 2.67
CYB561D2-205	ENST00000425346	PIK3C2G	O75747	1445 aa		31.74	■■■□□ 2.67
CYB561D2-205	ENST00000425346	CDC42BPG	Q6DT37	1551 aa		31.74	■■■□□ 2.67
CYB561D2-205	ENST00000425346	ABCC11	Q96J66	1382 aa		31.74	■■■□□ 2.67
CYB561D2-205	ENST00000425346	XPC	Q01831	940 aa	Predicted RBP	31.74	■■■□□ 2.67
CYB561D2-205	ENST00000425346	FOXO3	O43524	673 aa		31.73	■■■□□ 2.67
CYB561D2-205	ENST00000425346	RGS12	O14924	1447 aa		31.71	■■■□□ 2.67
CYB561D2-205	ENST00000425346	RBM6	P78332	1123 aa	Known RBP	31.71	■■■□□ 2.67
CYB561D2-205	ENST00000425346	PXDN	Q92626	1479 aa		31.69	■■■□□ 2.66
CYB561D2-205	ENST00000425346	NPHP3	Q7Z494	1330 aa		31.68	■■■□□ 2.66
CYB561D2-205	ENST00000425346	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.68	■■■□□ 2.66
CYB561D2-205	ENST00000425346	C14orf93	Q9H972	538 aa	Known RBP	31.67	■■■□□ 2.66
CYB561D2-205	ENST00000425346	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.65	■■■□□ 2.66
CYB561D2-205	ENST00000425346	CFAP70	Q5T0N1	1121 aa		31.65	■■■□□ 2.66
CYB561D2-205	ENST00000425346	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.65	■■■□□ 2.66
CYB561D2-205	ENST00000425346	USP21	Q9UK80	565 aa		31.65	■■■□□ 2.66
CYB561D2-205	ENST00000425346	MYOM2	P54296	1465 aa		31.64	■■■□□ 2.66
CYB561D2-205	ENST00000425346	KNDC1	Q76NI1	1749 aa		31.63	■■■□□ 2.65
CYB561D2-205	ENST00000425346	NRXN1	Q9ULB1	1477 aa		31.62	■■■□□ 2.65
CYB561D2-205	ENST00000425346	RAB3GAP2	Q9H2M9	1393 aa		31.6	■■■□□ 2.65
CYB561D2-205	ENST00000425346	SIRT1	Q96EB6	747 aa		31.58	■■■□□ 2.65
CYB561D2-205	ENST00000425346	FMN2	Q9NZ56	1722 aa		31.57	■■■□□ 2.64
CYB561D2-205	ENST00000425346	TRPC5	Q9UL62	973 aa	Predicted RBP	31.57	■■■□□ 2.64
CYB561D2-205	ENST00000425346	BCL9L	Q86UU0	1499 aa		31.55	■■■□□ 2.64
CYB561D2-205	ENST00000425346	ATRN	O75882	1429 aa		31.55	■■■□□ 2.64
CYB561D2-205	ENST00000425346	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.53	■■■□□ 2.64
CYB561D2-205	ENST00000425346	SPATA31A3	Q5VYP0	1347 aa		31.52	■■■□□ 2.64
CYB561D2-205	ENST00000425346	DHX57	Q6P158	1386 aa	Known RBP	31.52	■■■□□ 2.64
CYB561D2-205	ENST00000425346	PRAM1	Q96QH2	718 aa		31.51	■■■□□ 2.64
CYB561D2-205	ENST00000425346	ACIN1	Q9UKV3	1341 aa	Known RBP	31.51	■■■□□ 2.63
CYB561D2-205	ENST00000425346	KRT28	Q7Z3Y7	464 aa		31.5	■■■□□ 2.63
CYB561D2-205	ENST00000425346	RGPD8	O14715	1765 aa	Predicted RBP	31.5	■■■□□ 2.63
CYB561D2-205	ENST00000425346	EP400	Q96L91	3159 aa		31.49	■■■□□ 2.63
CYB561D2-205	ENST00000425346	PHF8	Q9UPP1	1060 aa		31.47	■■■□□ 2.63
CYB561D2-205	ENST00000425346	MARF1	Q9Y4F3	1742 aa	Known RBP	31.46	■■■□□ 2.63
CYB561D2-205	ENST00000425346	SRCAP	Q6ZRS2	3230 aa		31.45	■■■□□ 2.62
CYB561D2-205	ENST00000425346	KIF1A	Q12756	1690 aa		31.43	■■■□□ 2.62
CYB561D2-205	ENST00000425346	CABLES1	Q8TDN4	633 aa		31.43	■■■□□ 2.62
CYB561D2-205	ENST00000425346	ADGRB1	O14514	1584 aa		31.42	■■■□□ 2.62
CYB561D2-205	ENST00000425346	KDM2A	Q9Y2K7	1162 aa		31.42	■■■□□ 2.62
CYB561D2-205	ENST00000425346	GJD4	Q96KN9	370 aa	Predicted RBP	31.41	■■■□□ 2.62
CYB561D2-205	ENST00000425346	ATAD2	Q6PL18	1390 aa		31.4	■■■□□ 2.62
CYB561D2-205	ENST00000425346	PLEKHG5	O94827	1062 aa		31.4	■■■□□ 2.62
CYB561D2-205	ENST00000425346	TRAK1	Q9UPV9	953 aa		31.4	■■■□□ 2.62
CYB561D2-205	ENST00000425346	POGK	Q9P215	609 aa		31.39	■■■□□ 2.62
CYB561D2-205	ENST00000425346	SLIT2	O94813	1529 aa		31.38	■■■□□ 2.61
CYB561D2-205	ENST00000425346	DLC1	Q96QB1	1528 aa		31.38	■■■□□ 2.61
CYB561D2-205	ENST00000425346	PMFBP1	Q8TBY8	1022 aa		31.38	■■■□□ 2.61
CYB561D2-205	ENST00000425346	DCAF11	Q8TEB1	546 aa		31.38	■■■□□ 2.61
CYB561D2-205	ENST00000425346	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.38	■■■□□ 2.61
CYB561D2-205	ENST00000425346	USP32	Q8NFA0	1604 aa		31.38	■■■□□ 2.61
CYB561D2-205	ENST00000425346	UNC5CL	Q8IV45	518 aa		31.37	■■■□□ 2.61
CYB561D2-205	ENST00000425346	TNS3	Q68CZ2	1445 aa		31.37	■■■□□ 2.61
CYB561D2-205	ENST00000425346	PSME1	Q06323	249 aa		31.34	■■■□□ 2.61
CYB561D2-205	ENST00000425346	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.33	■■■□□ 2.61
CYB561D2-205	ENST00000425346	PRR36	Q9H6K5	1346 aa		31.33	■■■□□ 2.61
CYB561D2-205	ENST00000425346	GLI3	P10071	1580 aa		31.32	■■■□□ 2.6
CYB561D2-205	ENST00000425346	SBNO1	A3KN83	1393 aa		31.32	■■■□□ 2.6
CYB561D2-205	ENST00000425346	RALGAPB	Q86X10	1494 aa		31.32	■■■□□ 2.6
CYB561D2-205	ENST00000425346	LMOD2	Q6P5Q4	547 aa		31.31	■■■□□ 2.6
CYB561D2-205	ENST00000425346	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.3	■■■□□ 2.6
CYB561D2-205	ENST00000425346	ADGRB2	O60241	1585 aa		31.29	■■■□□ 2.6
CYB561D2-205	ENST00000425346	ANKAR	Q7Z5J8	1434 aa		31.29	■■■□□ 2.6
CYB561D2-205	ENST00000425346	HRC	P23327	699 aa		31.27	■■■□□ 2.6
CYB561D2-205	ENST00000425346	HAP1	P54257	671 aa	Predicted RBP	31.26	■■■□□ 2.6
CYB561D2-205	ENST00000425346	FAM83G	A6ND36	823 aa		31.25	■■■□□ 2.59
CYB561D2-205	ENST00000425346	WASL	O00401	505 aa	Predicted RBP	31.24	■■■□□ 2.59
CYB561D2-205	ENST00000425346	ABCA3	Q99758	1704 aa		31.23	■■■□□ 2.59
CYB561D2-205	ENST00000425346	ARHGEF10	O15013	1369 aa		31.23	■■■□□ 2.59
CYB561D2-205	ENST00000425346	VPS72	Q15906	364 aa		31.22	■■■□□ 2.59
CYB561D2-205	ENST00000425346	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.21	■■■□□ 2.59
CYB561D2-205	ENST00000425346	SEPT12	Q8IYM1	358 aa		31.19	■■■□□ 2.58
CYB561D2-205	ENST00000425346	TULP4	Q9NRJ4	1543 aa		31.18	■■■□□ 2.58
CYB561D2-205	ENST00000425346	PLCH1	Q4KWH8	1693 aa		31.18	■■■□□ 2.58
CYB561D2-205	ENST00000425346	STAC3	Q96MF2	364 aa		31.18	■■■□□ 2.58
CYB561D2-205	ENST00000425346	BRWD3	Q6RI45	1802 aa		31.17	■■■□□ 2.58
CYB561D2-205	ENST00000425346	ONECUT3	O60422	494 aa	Predicted RBP	31.17	■■■□□ 2.58
CYB561D2-205	ENST00000425346	CCDC125	Q86Z20	511 aa		31.16	■■■□□ 2.58
CYB561D2-205	ENST00000425346	ALS2	Q96Q42	1657 aa		31.14	■■■□□ 2.58
CYB561D2-205	ENST00000425346	GPRASP1	Q5JY77	1395 aa		31.14	■■■□□ 2.58
CYB561D2-205	ENST00000425346	NWD2	Q9ULI1	1742 aa		31.13	■■■□□ 2.57
CYB561D2-205	ENST00000425346	CCDC9	Q9Y3X0	531 aa	Known RBP	31.13	■■■□□ 2.57
CYB561D2-205	ENST00000425346	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.12	■■■□□ 2.57
CYB561D2-205	ENST00000425346	NGDN	Q8NEJ9	315 aa	Known RBP	31.11	■■■□□ 2.57
CYB561D2-205	ENST00000425346	BTG4	Q9NY30	223 aa		31.11	■■■□□ 2.57
CYB561D2-205	ENST00000425346	EIF3A	Q14152	1382 aa	Known RBP	31.1	■■■□□ 2.57
CYB561D2-205	ENST00000425346	NUDT16	Q96DE0	195 aa	Known RBP	31.1	■■■□□ 2.57
CYB561D2-205	ENST00000425346	ATP7B	P35670	1465 aa		31.08	■■■□□ 2.57
CYB561D2-205	ENST00000425346	PAK3	O75914	559 aa	Predicted RBP	31.08	■■■□□ 2.57
CYB561D2-205	ENST00000425346	NBPF1	Q3BBV0	1214 aa		31.08	■■■□□ 2.57

Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms