RNA–Protein interactions for RNA: ENST00000424805.1

PNMA3-201, Transcript of PNMA family member 3, humanhuman

TSL 5

Gene PNMA3, Length 3,158 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3-201ENST00000424805 KIF3BO15066 747 aa17.23■□□□□ 0.35
PNMA3-201ENST00000424805 VSIG10Q8N0Z9 540 aa17.23■□□□□ 0.35
PNMA3-201ENST00000424805 SAFB2Q14151 953 aaKnown RBP eCLIP17.23■□□□□ 0.35
PNMA3-201ENST00000424805 ZKSCAN2Q63HK3 967 aa17.23■□□□□ 0.35
PNMA3-201ENST00000424805 TMEM132EQ6IEE7 984 aa17.23■□□□□ 0.35
PNMA3-201ENST00000424805 UNC13BO14795 1591 aa17.23■□□□□ 0.35
PNMA3-201ENST00000424805 TTC37Q6PGP7 1564 aa17.22■□□□□ 0.35
PNMA3-201ENST00000424805 SPAG9O60271 1321 aaKnown RBP17.22■□□□□ 0.35
PNMA3-201ENST00000424805 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
PNMA3-201ENST00000424805 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
PNMA3-201ENST00000424805 FSD2A1L4K1 749 aa17.22■□□□□ 0.35
PNMA3-201ENST00000424805 LNPKQ9C0E8 428 aa17.22■□□□□ 0.35
PNMA3-201ENST00000424805 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
PNMA3-201ENST00000424805 GRPEL1Q9HAV7 217 aa17.21■□□□□ 0.35
PNMA3-201ENST00000424805 NINLQ9Y2I6 1382 aa17.21■□□□□ 0.35
PNMA3-201ENST00000424805 EXOSC9Q06265 439 aaKnown RBP17.21■□□□□ 0.35
PNMA3-201ENST00000424805 EFCAB2Q5VUJ9 269 aa17.21■□□□□ 0.35
PNMA3-201ENST00000424805 IQGAP3Q86VI3 1631 aa17.21■□□□□ 0.35
PNMA3-201ENST00000424805 TRIM44Q96DX7 344 aaPredicted RBP17.2■□□□□ 0.34
PNMA3-201ENST00000424805 MADDQ8WXG6 1647 aa17.2■□□□□ 0.34
PNMA3-201ENST00000424805 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
PNMA3-201ENST00000424805 HSP90AB1P08238 724 aaKnown RBP17.2■□□□□ 0.34
PNMA3-201ENST00000424805 MAST1Q9Y2H9 1570 aa17.19■□□□□ 0.34
PNMA3-201ENST00000424805 NPC1L1Q9UHC9 1359 aa17.19■□□□□ 0.34
PNMA3-201ENST00000424805 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
PNMA3-201ENST00000424805 RNF17Q9BXT8 1623 aaKnown RBP17.19■□□□□ 0.34
PNMA3-201ENST00000424805 MRE11P49959 708 aa17.19■□□□□ 0.34
PNMA3-201ENST00000424805 CFAP53Q96M91 514 aa17.19■□□□□ 0.34
PNMA3-201ENST00000424805 TRAPPC8Q9Y2L5 1435 aa17.19■□□□□ 0.34
PNMA3-201ENST00000424805 TRIM27P14373 513 aa17.18■□□□□ 0.34
PNMA3-201ENST00000424805 CLCN1P35523 988 aa17.18■□□□□ 0.34
PNMA3-201ENST00000424805 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
PNMA3-201ENST00000424805 DUOX2Q9NRD8 1548 aa17.18■□□□□ 0.34
PNMA3-201ENST00000424805 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
PNMA3-201ENST00000424805 ERBB4Q15303 1308 aa17.18■□□□□ 0.34
PNMA3-201ENST00000424805 POLR3AO14802 1390 aaPredicted RBP17.17■□□□□ 0.34
PNMA3-201ENST00000424805 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.17■□□□□ 0.34
PNMA3-201ENST00000424805 SSH1Q8WYL5 1049 aa17.17■□□□□ 0.34
PNMA3-201ENST00000424805 IQGAP1P46940 1657 aa17.17■□□□□ 0.34
PNMA3-201ENST00000424805 MYOM1P52179 1685 aa17.16■□□□□ 0.34
PNMA3-201ENST00000424805 WDR63Q8IWG1 891 aa17.16■□□□□ 0.34
PNMA3-201ENST00000424805 ESPNB1AK53 854 aa17.16■□□□□ 0.34
PNMA3-201ENST00000424805 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
PNMA3-201ENST00000424805 ATP10AO60312 1499 aa17.16■□□□□ 0.34
PNMA3-201ENST00000424805 KIF13AQ9H1H9 1805 aa17.16■□□□□ 0.34
PNMA3-201ENST00000424805 GAS2L3Q86XJ1 694 aa17.16■□□□□ 0.34
PNMA3-201ENST00000424805 TNPO1Q92973 898 aaKnown RBP17.16■□□□□ 0.34
PNMA3-201ENST00000424805 GLIPR1L2Q4G1C9 344 aa17.15■□□□□ 0.34
PNMA3-201ENST00000424805 TMEM57Q8N5G2 664 aa17.15■□□□□ 0.34
PNMA3-201ENST00000424805 UGGT1Q9NYU2 1555 aa17.14■□□□□ 0.34
PNMA3-201ENST00000424805 DDX11L8A8MPP1 907 aa17.14■□□□□ 0.33
PNMA3-201ENST00000424805 KDM5AP29375 1690 aaKnown RBP17.14■□□□□ 0.33
PNMA3-201ENST00000424805 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
PNMA3-201ENST00000424805 RBM42Q9BTD8 480 aaKnown RBP17.13■□□□□ 0.33
PNMA3-201ENST00000424805 SCAPERQ9BY12 1400 aa17.11■□□□□ 0.33
PNMA3-201ENST00000424805 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
PNMA3-201ENST00000424805 PKNOX2Q96KN3 472 aa17.11■□□□□ 0.33
PNMA3-201ENST00000424805 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
PNMA3-201ENST00000424805 CD2BP2O95400 341 aaKnown RBP17.11■□□□□ 0.33
PNMA3-201ENST00000424805 AAMPQ13685 434 aa17.1■□□□□ 0.33
PNMA3-201ENST00000424805 CLTCL1P53675 1640 aa17.1■□□□□ 0.33
PNMA3-201ENST00000424805 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
PNMA3-201ENST00000424805 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
PNMA3-201ENST00000424805 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
PNMA3-201ENST00000424805 CABP2Q9NPB3 220 aa17.1■□□□□ 0.33
PNMA3-201ENST00000424805 NCLP19338 710 aaKnown RBP17.1■□□□□ 0.33
PNMA3-201ENST00000424805 RTEL1-TNFRSF6BF6WH68 1400 aa17.09■□□□□ 0.33
PNMA3-201ENST00000424805 KANK1Q14678 1352 aa17.09■□□□□ 0.33
PNMA3-201ENST00000424805 ELL2O00472 640 aaPredicted RBP17.09■□□□□ 0.33
PNMA3-201ENST00000424805 ZMYND15Q9H091 742 aa17.09■□□□□ 0.33
PNMA3-201ENST00000424805 GBP4Q96PP9 640 aa17.08■□□□□ 0.33
PNMA3-201ENST00000424805 PHF23Q9BUL5 403 aaPredicted RBP17.08■□□□□ 0.33
PNMA3-201ENST00000424805 CEP152O94986 1710 aa17.08■□□□□ 0.32
PNMA3-201ENST00000424805 PLXNC1O60486 1568 aa17.07■□□□□ 0.32
PNMA3-201ENST00000424805 PTPRTO14522 1441 aa17.06■□□□□ 0.32
PNMA3-201ENST00000424805 SSFA2P28290 1259 aa17.06■□□□□ 0.32
PNMA3-201ENST00000424805 RIPK4P57078 832 aa17.06■□□□□ 0.32
PNMA3-201ENST00000424805 STK26Q9P289 416 aa17.06■□□□□ 0.32
PNMA3-201ENST00000424805 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
PNMA3-201ENST00000424805 STAC3Q96MF2 364 aa17.06■□□□□ 0.32
PNMA3-201ENST00000424805 TMPOP42166 694 aaKnown RBP17.05■□□□□ 0.32
PNMA3-201ENST00000424805 HDAC1Q13547 482 aaPredicted RBP17.05■□□□□ 0.32
PNMA3-201ENST00000424805 TRPM2O94759 1503 aa17.05■□□□□ 0.32
PNMA3-201ENST00000424805 SMC5Q8IY18 1101 aa17.05■□□□□ 0.32
PNMA3-201ENST00000424805 SPHKAPQ2M3C7 1700 aa17.05■□□□□ 0.32
PNMA3-201ENST00000424805 ARID3AQ99856 593 aa17.05■□□□□ 0.32
PNMA3-201ENST00000424805 CHD1LQ86WJ1 897 aa17.04■□□□□ 0.32
PNMA3-201ENST00000424805 NOS1P29475 1434 aa17.04■□□□□ 0.32
PNMA3-201ENST00000424805 DDX49Q9Y6V7 483 aaKnown RBP17.04■□□□□ 0.32
PNMA3-201ENST00000424805 ERCC6L2Q5T890 1561 aa17.03■□□□□ 0.32
PNMA3-201ENST00000424805 PLCH2O75038 1416 aa17.03■□□□□ 0.32
PNMA3-201ENST00000424805 FBLN1P23142 703 aa17.03■□□□□ 0.32
PNMA3-201ENST00000424805 CCDC27Q2M243 656 aa17.03■□□□□ 0.32
PNMA3-201ENST00000424805 ZBTB40Q9NUA8 1239 aa17.03■□□□□ 0.32
PNMA3-201ENST00000424805 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
PNMA3-201ENST00000424805 GGT6Q6P531 493 aa17.03■□□□□ 0.32
PNMA3-201ENST00000424805 THUMPD2Q9BTF0 503 aaKnown RBP17.02■□□□□ 0.32
PNMA3-201ENST00000424805 RRP9O43818 475 aaKnown RBP17.02■□□□□ 0.31
PNMA3-201ENST00000424805 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.31
PNMA3-201ENST00000424805 IQSEC2Q5JU85 1478 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms